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ATCC10864_008415-T1, ATCC10864_008415-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008415-T1
Unique NameATCC10864_008415-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:617376..618536+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008415-T1 ID=ATCC10864_008415-T1|Name=ATCC10864_008415-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1161bp|location=Sequence derived from alignment at MCQH01000199:617376..618536+ (Aspergillus niger ATCC 10864)
ATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGTTGGTCAACGCCTACTC
AGACCCGGGTGCATGCTCGGGAACCTGCTGGGCACACGACCCCAATGTCA
TTCGCCGTGTGTCGGATGGAACCTACTTTCGTTTCTCGACAGGTGGTGGT
GTCCATATCTCCTCTGCCAGCGCCATCACTGGTCCCTGGACTGATCTCGG
GTATGCACTGCCTAACGGATCCATCGTTACAGTGGGAAATGCCTCCAACC
TTTGGGTAAGACAGACTGACAACCCTGGACATCACCCTTGCCATCTGCAG
TTCTGACATTCCCGCAGGCTCCGGACGTACACTACGTAGATGGCACATAC
TACATGTACTATGCTAGCTCTACCCTGGGCAGCCGGGATTCCACCATTGG
AGTTGCAACCTCCACCACCCTGGAAGCCGACTCCTGGACCGACCACGGCG
AGATTGGTGTCACCTCGTCTTCGTCCACCCCTTACAACGCCATTGACCCC
AACTGGATCACCATTGGCAGCACCCCCTATCTCCAATTCGGCTCCTACTG
GCAAGGTCTCTACCAGGTGGAAATGACCGACTCCCTGAGCGCCAGCAGCA
GCACGCCCACTAACTTGGCCTACAACGCATCGGGGAACCATGCTATCGAG
GCTTCTTACCTGTACGAGTACGGAGGCTACTACTACCTCACCTTCTCGTC
CGGCAAGGCTCAGGGGTACACGACCTCCCTGCCTGCCCAGGGCGATGAGT
ACCGCATTGTCGTTTGCCGGTCCAAGACTGGAACGGGTAACTTTGTAAGT
GCTATATGCCAATCATCAACATTCAAGGAATAGGGGGGGGAATGCTAATT
TCGCCTGCAGGTCGACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAA
CCACCGTTCTGGCCAGCCACGACTATGTCTACGGCCCTGGTGGACAGTAA
GTTTGCCCCTGTCTTCTTTTGTGGCTTGACGCACATCAAACGGGGAAGCA
TGCTAACAATGATCAATTGCAGGGGTATCATCAACACCACCAGCCACGGT
ATTGTCGTCTACTACCACTATGCCAACAAGAACATTGGCCTGGCTGTCGA
TGACTACCAGTTCGGCTGGAACACGCTCACCTGGACTGATGGGTGGCCTG
TTGTGGCGTGA
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Coding sequence (CDS) from alignment at MCQH01000199:617376..618536+

>ATCC10864_008415-T1 ID=ATCC10864_008415-T1|Name=ATCC10864_008415-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3828bp|location=Sequence derived from alignment at MCQH01000199:617376..618536+ (Aspergillus niger ATCC 10864)
ATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGTTGGTCAACGCCTACTC
AGACCCGGGTGCATGCTCGGGAACCTGCTGGGCACACGACCCCAATGTCA
TTCGCCGTGTGTCGGATGGAACCTACTTTCGTTTCTCGACAGGTGGTGGT
GTCCATATCTCCTCTGCCAGCGCCATCACTGGTCCCTGGACTGATCTCGG
GTATGCACTGCCTAACGGATCCATCGTTACAGTGGGAAATGCCTCCAACC
TTTGGGCTCCGGACGTACACTACGTAGATGGCACATACTACATGTACTAT
GCTAGCTCTACCCTGGGCAGCCGGGATTCCACCATTGGAGTTGCAACCTC
CACCACCCTGGAAGCCGACTCCTGGACCGACCACGGCGAGATTGGTGTCA
CCTCGTCTTCGTCCACCCCTTACAACGCCATTGACCCCAACTGGATCACC
ATTGGCAGCACCCCCTATCTCCAATTCGGCTCCTACTGGCAAGGTCTCTA
CCAGGTGGAAATGACCGACTCCCTGAGCGCCAGCAGCAGCACGCCCACTA
ACTTGGCCTACAACGCATCGGGGAACCATGCTATCGAGGCTTCTTACCTG
TACGAGTACGGAGGCTACTACTACCTCACCTTCTCGTCCGGCAAGGCTCA
GGGGTACACGACCTCCCTGCCTGCCCAGGGCGATGAGTACCGCATTGTCG
TTTGCCGGTCCAAGACTGGAACGGGTAACTTTGTCGACAAGGATGGTGTT
TCATGCCTGAACAGCGGCGGAACCACCGTTCTGGCCAGCCACGACTATGT
CTACGGCCCTGGTGGACAGGGTATCATCAACACCACCAGCCACGGTATTG
TCGTCTACTACCACTATGCCAACAAGAACATTGGCCTGGCTGTCGATGAC
TACCAGTTCGGCTGGAACACGCTCACCTGGACTGATGGGTGGCCTGTTGT
GGCGTGAATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGTTGGTCAACG
CCTACTCAGACCCGGGTGCATGCTCGGGAACCTGCTGGGCACACGACCCC
AATGTCATTCGCCGTGTGTCGGATGGAACCTACTTTCGTTTCTCGACAGG
TGGTGGTGTCCATATCTCCTCTGCCAGCGCCATCACTGGTCCCTGGACTG
ATCTCGGGTATGCACTGCCTAACGGATCCATCGTTACAGTGGGAAATGCC
TCCAACCTTTGGGCTCCGGACGTACACTACGTAGATGGCACATACTACAT
GTACTATGCTAGCTCTACCCTGGGCAGCCGGGATTCCACCATTGGAGTTG
CAACCTCCACCACCCTGGAAGCCGACTCCTGGACCGACCACGGCGAGATT
GGTGTCACCTCGTCTTCGTCCACCCCTTACAACGCCATTGACCCCAACTG
GATCACCATTGGCAGCACCCCCTATCTCCAATTCGGCTCCTACTGGCAAG
GTCTCTACCAGGTGGAAATGACCGACTCCCTGAGCGCCAGCAGCAGCACG
CCCACTAACTTGGCCTACAACGCATCGGGGAACCATGCTATCGAGGCTTC
TTACCTGTACGAGTACGGAGGCTACTACTACCTCACCTTCTCGTCCGGCA
AGGCTCAGGGGTACACGACCTCCCTGCCTGCCCAGGGCGATGAGTACCGC
ATTGTCGTTTGCCGGTCCAAGACTGGAACGGGTAACTTTGTCGACAAGGA
TGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGTTCTGGCCAGCCACG
ACTATGTCTACGGCCCTGGTGGACAGGGTATCATCAACACCACCAGCCAC
GGTATTGTCGTCTACTACCACTATGCCAACAAGAACATTGGCCTGGCTGT
CGATGACTACCAGTTCGGCTGGAACACGCTCACCTGGACTGATGGGTGGC
CTGTTGTGGCGTGAATGCTTTCGTTTGTCTTGCTTCTTTGTGTAGCGTTG
GTCAACGCCTACTCAGACCCGGGTGCATGCTCGGGAACCTGCTGGGCACA
CGACCCCAATGTCATTCGCCGTGTGTCGGATGGAACCTACTTTCGTTTCT
CGACAGGTGGTGGTGTCCATATCTCCTCTGCCAGCGCCATCACTGGTCCC
TGGACTGATCTCGGGTATGCACTGCCTAACGGATCCATCGTTACAGTGGG
AAATGCCTCCAACCTTTGGGCTCCGGACGTACACTACGTAGATGGCACAT
ACTACATGTACTATGCTAGCTCTACCCTGGGCAGCCGGGATTCCACCATT
GGAGTTGCAACCTCCACCACCCTGGAAGCCGACTCCTGGACCGACCACGG
CGAGATTGGTGTCACCTCGTCTTCGTCCACCCCTTACAACGCCATTGACC
CCAACTGGATCACCATTGGCAGCACCCCCTATCTCCAATTCGGCTCCTAC
TGGCAAGGTCTCTACCAGGTGGAAATGACCGACTCCCTGAGCGCCAGCAG
CAGCACGCCCACTAACTTGGCCTACAACGCATCGGGGAACCATGCTATCG
AGGCTTCTTACCTGTACGAGTACGGAGGCTACTACTACCTCACCTTCTCG
TCCGGCAAGGCTCAGGGGTACACGACCTCCCTGCCTGCCCAGGGCGATGA
GTACCGCATTGTCGTTTGCCGGTCCAAGACTGGAACGGGTAACTTTGTCG
ACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGTTCTGGCC
AGCCACGACTATGTCTACGGCCCTGGTGGACAGGGTATCATCAACACCAC
CAGCCACGGTATTGTCGTCTACTACCACTATGCCAACAAGAACATTGGCC
TGGCTGTCGATGACTACCAGTTCGGCTGGAACACGCTCACCTGGACTGAT
GGGTGGCCTGTTGTGGCGTGAATGCTTTCGTTTGTCTTGCTTCTTTGTGT
AGCGTTGGTCAACGCCTACTCAGACCCGGGTGCATGCTCGGGAACCTGCT
GGGCACACGACCCCAATGTCATTCGCCGTGTGTCGGATGGAACCTACTTT
CGTTTCTCGACAGGTGGTGGTGTCCATATCTCCTCTGCCAGCGCCATCAC
TGGTCCCTGGACTGATCTCGGGTATGCACTGCCTAACGGATCCATCGTTA
CAGTGGGAAATGCCTCCAACCTTTGGGCTCCGGACGTACACTACGTAGAT
GGCACATACTACATGTACTATGCTAGCTCTACCCTGGGCAGCCGGGATTC
CACCATTGGAGTTGCAACCTCCACCACCCTGGAAGCCGACTCCTGGACCG
ACCACGGCGAGATTGGTGTCACCTCGTCTTCGTCCACCCCTTACAACGCC
ATTGACCCCAACTGGATCACCATTGGCAGCACCCCCTATCTCCAATTCGG
CTCCTACTGGCAAGGTCTCTACCAGGTGGAAATGACCGACTCCCTGAGCG
CCAGCAGCAGCACGCCCACTAACTTGGCCTACAACGCATCGGGGAACCAT
GCTATCGAGGCTTCTTACCTGTACGAGTACGGAGGCTACTACTACCTCAC
CTTCTCGTCCGGCAAGGCTCAGGGGTACACGACCTCCCTGCCTGCCCAGG
GCGATGAGTACCGCATTGTCGTTTGCCGGTCCAAGACTGGAACGGGTAAC
TTTGTCGACAAGGATGGTGTTTCATGCCTGAACAGCGGCGGAACCACCGT
TCTGGCCAGCCACGACTATGTCTACGGCCCTGGTGGACAGGGTATCATCA
ACACCACCAGCCACGGTATTGTCGTCTACTACCACTATGCCAACAAGAAC
ATTGGCCTGGCTGTCGATGACTACCAGTTCGGCTGGAACACGCTCACCTG
GACTGATGGGTGGCCTGTTGTGGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008415ATCC10864_008415Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008415-T1.exon1ATCC10864_008415-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008415-T1.exon2ATCC10864_008415-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008415-T1.exon3ATCC10864_008415-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008415-T1.exon4ATCC10864_008415-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008415-T1.cdsATCC10864_008415-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008415-T1ATCC10864_008415-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR023296
PFAMPF04616
InterProIPR016840
InterProIPR006710
Properties
Property NameValue
NoteCAZy:GH43
NoteSECRETED:SignalP(1-15)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:617376..618536 +
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