You are here

ATCC10864_008421-T1, ATCC10864_008421-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008421-T1
Unique NameATCC10864_008421-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:634192..635405-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008421-T1 ID=ATCC10864_008421-T1|Name=ATCC10864_008421-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1214bp|location=Sequence derived from alignment at MCQH01000199:634192..635405- (Aspergillus niger ATCC 10864)
ATGTCCTCTACTGAAACGCAATTTGGAAACATGTCGACTACTGTTCTTGT CACTGGTGCTACCGGCCTTCTGGGTCGACAGGTATTCAATACCTTCAAGC ACTCCGGCTGTCTGGTCGTGGGTCAAGGCTATTCCAGAGCCATACCTCCC ACGATACAGAAGGCCGATCTGGAAAAGGAGGAGGACATCAAGAATTTGTT GAACGAAGCGAAGTAAATCAATTCCCGACTACGGCTTCCGCCTGCATCTT ACACTGAATACCCCCCCATCTCACACCCGCGTTGTACACGAATTGAATCT GACTGATGTCCGTGCCCCTGCAGACCTCAGATAGTCATCCATTGTACGCC ACCTCCTGTTGGAAATGCAGCCAATCTGCATCGCCTTGTACGCTGACCGT TCCGCTCTAGGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCC GGACCAGGCGCGTCGGGTCAACGTTGACGCCACCCGCACCCTCGCAGAAG AGACCGCGCGCCGTGGTGCCCTGCTGGTTTACATCTCAACCGACTATGTT TTCCCTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGATGCTCAGACCAA CCCGCCGAATCTGTACGGGCAGTTCAAGCGGGATGGCGAGGTGGCTGTGC TGGAGGCCACCAAGGACACCGGGCTAGGGATTGTGCTGCGGGTGCCCGTG TTGTATGGGACTGCTAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGT GGATGCGGTGTACAAGGCCCAAGATGAGAGTGCGGGCGTGAAGATGGACG ACTGGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGC CGTGACATTGTAATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCT TCCCAAGATCCTGCAATTCTCGTCGGAGGATCGAATGACCAAGTACGAGA TTTGTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTA CGCAACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGA CACTCACCTGTCGACAAAAGCGCTGAAGGAGCTCGGAATTGATCTTCGGA CGGTCGACTTTGTATCGTGGTGGTAAGTTGTTCTTTCCCTTATCAGGATG GTGCATAGTAGAGAGGCTAACTCTCAGACGCAGGCGGAAACACTTGGGAG CGTACAAGCATTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:634192..635405-

>ATCC10864_008421-T1 ID=ATCC10864_008421-T1|Name=ATCC10864_008421-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3900bp|location=Sequence derived from alignment at MCQH01000199:634192..635405- (Aspergillus niger ATCC 10864)
GCGGAAACACTTGGGAGCGTACAAGCATTAAGTGCCGCAAACCGTTCCCC
CGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGACG
CCACCCGCACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGTT
TACATCTCAACCGACTATGTTTTCCCTGGTAAGGAGGGGGAGGCTCCCTA
CGAGGCCGATGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAGC
GGGATGGCGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGGG
ATTGTGCTGCGGGTGCCCGTGTTGTATGGGACTGCTAAGGAGAACTCGGA
GAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAAGATGAGA
GTGCGGGCGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACACC
GAAGATGTTGCACGGGTGTGCCGTGACATTGTAATCAAGTATGTCAAGGA
GCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAATTCTCGTCGGAGG
ATCGAATGACCAAGTACGAGATTTGTGAGAAGCTGGCGGATGTGCTCGGA
CTGTCCCTGGTTGGCATGGTACGCAACAAGCAAGGGAATGATCCAAACGC
GAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAGG
AGCTCGGAATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGACCTCAG
ATAGTCATCCATTATGTCCTCTACTGAAACGCAATTTGGAAACATGTCGA
CTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGTCGACAGGTATTC
AATACCTTCAAGCACTCCGGCTGTCTGGTCGTGGGTCAAGGCTATTCCAG
AGCCATACCTCCCACGATACAGAAGGCCGATCTGGAAAAGGAGGAGGACA
TCAAGAATTTGTTGAACGAAGCGAAGCGGAAACACTTGGGAGCGTACAAG
CATTAAGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGAC
CAGGCGCGTCGGGTCAACGTTGACGCCACCCGCACCCTCGCAGAAGAGAC
CGCGCGCCGTGGTGCCCTGCTGGTTTACATCTCAACCGACTATGTTTTCC
CTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGATGCTCAGACCAACCCG
CCGAATCTGTACGGGCAGTTCAAGCGGGATGGCGAGGTGGCTGTGCTGGA
GGCCACCAAGGACACCGGGCTAGGGATTGTGCTGCGGGTGCCCGTGTTGT
ATGGGACTGCTAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGAT
GCGGTGTACAAGGCCCAAGATGAGAGTGCGGGCGTGAAGATGGACGACTG
GGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGTG
ACATTGTAATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCCC
AAGATCCTGCAATTCTCGTCGGAGGATCGAATGACCAAGTACGAGATTTG
TGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTACGCA
ACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACACT
CACCTGTCGACAAAAGCGCTGAAGGAGCTCGGAATTGATCTTCGGACGGT
CGACTTTGTATCGTGGTGACCTCAGATAGTCATCCATTATGTCCTCTACT
GAAACGCAATTTGGAAACATGTCGACTACTGTTCTTGTCACTGGTGCTAC
CGGCCTTCTGGGTCGACAGGTATTCAATACCTTCAAGCACTCCGGCTGTC
TGGTCGTGGGTCAAGGCTATTCCAGAGCCATACCTCCCACGATACAGAAG
GCCGATCTGGAAAAGGAGGAGGACATCAAGAATTTGTTGAACGAAGCGAA
GCGGAAACACTTGGGAGCGTACAAGCATTAAGTGCCGCAAACCGTTCCCC
CGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGACG
CCACCCGCACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGTT
TACATCTCAACCGACTATGTTTTCCCTGGTAAGGAGGGGGAGGCTCCCTA
CGAGGCCGATGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAGC
GGGATGGCGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGGG
ATTGTGCTGCGGGTGCCCGTGTTGTATGGGACTGCTAAGGAGAACTCGGA
GAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAAGATGAGA
GTGCGGGCGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACACC
GAAGATGTTGCACGGGTGTGCCGTGACATTGTAATCAAGTATGTCAAGGA
GCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAATTCTCGTCGGAGG
ATCGAATGACCAAGTACGAGATTTGTGAGAAGCTGGCGGATGTGCTCGGA
CTGTCCCTGGTTGGCATGGTACGCAACAAGCAAGGGAATGATCCAAACGC
GAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAGG
AGCTCGGAATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGACCTCAG
ATAGTCATCCATTATGTCCTCTACTGAAACGCAATTTGGAAACATGTCGA
CTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGTCGACAGGTATTC
AATACCTTCAAGCACTCCGGCTGTCTGGTCGTGGGTCAAGGCTATTCCAG
AGCCATACCTCCCACGATACAGAAGGCCGATCTGGAAAAGGAGGAGGACA
TCAAGAATTTGTTGAACGAAGCGAAGCGGAAACACTTGGGAGCGTACAAG
CATTAAGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGAC
CAGGCGCGTCGGGTCAACGTTGACGCCACCCGCACCCTCGCAGAAGAGAC
CGCGCGCCGTGGTGCCCTGCTGGTTTACATCTCAACCGACTATGTTTTCC
CTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGATGCTCAGACCAACCCG
CCGAATCTGTACGGGCAGTTCAAGCGGGATGGCGAGGTGGCTGTGCTGGA
GGCCACCAAGGACACCGGGCTAGGGATTGTGCTGCGGGTGCCCGTGTTGT
ATGGGACTGCTAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGAT
GCGGTGTACAAGGCCCAAGATGAGAGTGCGGGCGTGAAGATGGACGACTG
GGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGTG
ACATTGTAATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCCC
AAGATCCTGCAATTCTCGTCGGAGGATCGAATGACCAAGTACGAGATTTG
TGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTACGCA
ACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACACT
CACCTGTCGACAAAAGCGCTGAAGGAGCTCGGAATTGATCTTCGGACGGT
CGACTTTGTATCGTGGTGACCTCAGATAGTCATCCATTATGTCCTCTACT
GAAACGCAATTTGGAAACATGTCGACTACTGTTCTTGTCACTGGTGCTAC
CGGCCTTCTGGGTCGACAGGTATTCAATACCTTCAAGCACTCCGGCTGTC
TGGTCGTGGGTCAAGGCTATTCCAGAGCCATACCTCCCACGATACAGAAG
GCCGATCTGGAAAAGGAGGAGGACATCAAGAATTTGTTGAACGAAGCGAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008421ATCC10864_008421Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008421-T1ATCC10864_008421-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008421-T1.cdsATCC10864_008421-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008421-T1.exon4ATCC10864_008421-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008421-T1.exon3ATCC10864_008421-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008421-T1.exon2ATCC10864_008421-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008421-T1.exon1ATCC10864_008421-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005913
PFAMPF01370
InterProIPR029903
PFAMPF04321
InterProIPR036291
PFAMPF01073
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:634192..635405 -