You are here

Home

ATCC10864_008424-T1, ATCC10864_008424-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008424-T1
Unique NameATCC10864_008424-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:639680..641529-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008424-T1 ID=ATCC10864_008424-T1|Name=ATCC10864_008424-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1850bp|location=Sequence derived from alignment at MCQH01000199:639680..641529- (Aspergillus niger ATCC 10864)
ATGGCCCCTCAGTCATACGGACGGGTATGTATCGCCCGCCCACTATCTAT
ATCTTGCTTACGGAGGCGGGCGAACAGGCCTGTCTAAATTGCTCAAAAGC
CAAATGCAAATGCGTTGACCGACCAGGGGTCCAGGGGTGCGAGAGATGCT
ATCGATTGAACAAGTCATGCCTGCGAGGGACGTCGACGAGAGCGATGCAG
TCCCAGAAGAACAACACCGTCGCGCGCATTGCTCAGCTAGAAGGGAAGCT
GAATGAACTTGTGTCATCCCTCCAGCCGCATCGCGCGCCAAGTAGCTGCA
ATAGTTCTATCGAAAACTCTCTTTCTGCTCCACTATCTAACTCCACTTCT
CCTGCTACTTCTGGAGATGTATACACTGTCCCCGCAGTGCCGACGTCTAA
TCTGGACAGCTTGGAGTTTTCACCGGAAGAGTCTCTAGACATATTCCGAA
CTCGCATGCTTCAGTACTTTCCCTTTCTACATCTTCCTAGCAACGCGCAA
TGGATGCGCCAGGAGCGGCCATTTTTGTTCCTCTGCATTATGGCAGTGAC
ATGTCCGTCAATACCGACCAAGCTCGCCTTAGGGGAGAAGATCAGAAAGA
TTGCCACGGAAAGAATGTTTCTTTCGAGTGACCCGGGGGCAGTGAACCTT
GATCTCCTGCTAGGTCTTTTGACAGTTCTAGCCTGGGGTTACGATCACTT
ACTACACGATACCGCAATGGGACTGCCGCGTTTTACTCAGCTCGCTATAA
CAGTTGTATACGAACTGCGTCTCAACAAGCCGCTTCCTGATGACTCTAAT
GTACTTACTGCCGGGCTCGGTGGCTGCGCATCATCGAGAGCACCGACTCG
GACGCTTGAGGAGCAGCGAGCGGTCCTAGCATGTTTTGTCTTGAGCTCAA
TGTTAGTTTGCAAGCACTCCTACTTAATATATGCCTAACGCAGCCAGCGT
ATCGACATGTCTTGACAACATCCAACCAATGCAGTGGACGGCACATATGG
AAGAATGCCTTGAAGCCCTGGCTCGAAAACGTGAAACGCCGCTTGACGAA
GTGTTCGCTCATCAAGTCCGACTGCACCGTATTGCAAGAGAGGCGGAGCA
TATTCGAATTGCATCAACAGCCGTTCCAGCAGCTTTTCACCTCACAGCCT
TGCAGCGGAAGGTCAATGAAGTCAAGCAAAGTATAACACCTGAACTGCGA
CAGAATAGTGAGTGCATCAACAATCACACTGTTGTCAGATAAACCATGTC
TCATCATGAACAGGCCTGTTCCGTGCCTCGACATATTACACCGAATTGAG
CATCCACGGCCTGGTCCTCTCTAAAAAGCAAGACACTCCAGACCTACAAA
GGCTTGAAGGACTCCACGCATGTCTCGAAACCGCCAGATCAGCCCTCGAT
AGCTTCTTCCAGATATCGTCCACTGATGATTATATCGGAATTTCATTCCT
TTTCTTCAACTACCTCGCGCGGAGCATCCTAGTCATCATGACGCTGTCGA
CGATGAACGACCCCATCTGGGACACAAACCTGGTGCGATCGACCGTGGAT
GTTCTGTGGATATTGGACCGCCTGATCAGCGGGGTGCAGGAAGCCAAGGC
GTCGAGAGGTGAAGAAGGCGAGTCAGCTAATGGATTCTTGGACAAGTCGA
CCAAGAAGCTTATGTCACTTCGTGCTTCAGCGTGTGCTGCGCTGATGCCG
GAGAAGACGCAGCCGCAGCGTAGTAGCGCTGCTCAAGCGGCCGAGAATGA
CTTGCAGGTCTTGAGCATGCTTCAGGCTTACGAAATGATGGACGCGGGGT
TAATGGCTAGTTTTATGGAGGGGACAGCTATATTTGATGGATTTTATTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000199:639680..641529-

>ATCC10864_008424-T1 ID=ATCC10864_008424-T1|Name=ATCC10864_008424-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6780bp|location=Sequence derived from alignment at MCQH01000199:639680..641529- (Aspergillus niger ATCC 10864)
GCCTGTTCCGTGCCTCGACATATTACACCGAATTGAGCATCCACGGCCTG
GTCCTCTCTAAAAAGCAAGACACTCCAGACCTACAAAGGCTTGAAGGACT
CCACGCATGTCTCGAAACCGCCAGATCAGCCCTCGATAGCTTCTTCCAGA
TATCGTCCACTGATGATTATATCGGAATTTCATTCCTTTTCTTCAACTAC
CTCGCGCGGAGCATCCTAGTCATCATGACGCTGTCGACGATGAACGACCC
CATCTGGGACACAAACCTGGTGCGATCGACCGTGGATGTTCTGTGGATAT
TGGACCGCCTGATCAGCGGGGTGCAGGAAGCCAAGGCGTCGAGAGGTGAA
GAAGGCGAGTCAGCTAATGGATTCTTGGACAAGTCGACCAAGAAGCTTAT
GTCACTTCGTGCTTCAGCGTGTGCTGCGCTGATGCCGGAGAAGACGCAGC
CGCAGCGTAGTAGCGCTGCTCAAGCGGCCGAGAATGACTTGCAGGTCTTG
AGCATGCTTCAGGCTTACGAAATGATGGACGCGGGGTTAATGGCTAGTTT
TATGGAGGGGACAGCTATATTTGATGGATTTTATTAGCGTATCGACATGT
CTTGACAACATCCAACCAATGCAGTGGACGGCACATATGGAAGAATGCCT
TGAAGCCCTGGCTCGAAAACGTGAAACGCCGCTTGACGAAGTGTTCGCTC
ATCAAGTCCGACTGCACCGTATTGCAAGAGAGGCGGAGCATATTCGAATT
GCATCAACAGCCGTTCCAGCAGCTTTTCACCTCACAGCCTTGCAGCGGAA
GGTCAATGAAGTCAAGCAAAGTATAACACCTGAACTGCGACAGAATAGCC
TGTCTAAATTGCTCAAAAGCCAAATGCAAATGCGTTGACCGACCAGGGGT
CCAGGGGTGCGAGAGATGCTATCGATTGAACAAGTCATGCCTGCGAGGGA
CGTCGACGAGAGCGATGCAGTCCCAGAAGAACAACACCGTCGCGCGCATT
GCTCAGCTAGAAGGGAAGCTGAATGAACTTGTGTCATCCCTCCAGCCGCA
TCGCGCGCCAAGTAGCTGCAATAGTTCTATCGAAAACTCTCTTTCTGCTC
CACTATCTAACTCCACTTCTCCTGCTACTTCTGGAGATGTATACACTGTC
CCCGCAGTGCCGACGTCTAATCTGGACAGCTTGGAGTTTTCACCGGAAGA
GTCTCTAGACATATTCCGAACTCGCATGCTTCAGTACTTTCCCTTTCTAC
ATCTTCCTAGCAACGCGCAATGGATGCGCCAGGAGCGGCCATTTTTGTTC
CTCTGCATTATGGCAGTGACATGTCCGTCAATACCGACCAAGCTCGCCTT
AGGGGAGAAGATCAGAAAGATTGCCACGGAAAGAATGTTTCTTTCGAGTG
ACCCGGGGGCAGTGAACCTTGATCTCCTGCTAGGTCTTTTGACAGTTCTA
GCCTGGGGTTACGATCACTTACTACACGATACCGCAATGGGACTGCCGCG
TTTTACTCAGCTCGCTATAACAGTTGTATACGAACTGCGTCTCAACAAGC
CGCTTCCTGATGACTCTAATGTACTTACTGCCGGGCTCGGTGGCTGCGCA
TCATCGAGAGCACCGACTCGGACGCTTGAGGAGCAGCGAGCGGTCCTAGC
ATGTTTTGTCTTGAGCTCAATATGGCCCCTCAGTCATACGGACGGGCCTG
TTCCGTGCCTCGACATATTACACCGAATTGAGCATCCACGGCCTGGTCCT
CTCTAAAAAGCAAGACACTCCAGACCTACAAAGGCTTGAAGGACTCCACG
CATGTCTCGAAACCGCCAGATCAGCCCTCGATAGCTTCTTCCAGATATCG
TCCACTGATGATTATATCGGAATTTCATTCCTTTTCTTCAACTACCTCGC
GCGGAGCATCCTAGTCATCATGACGCTGTCGACGATGAACGACCCCATCT
GGGACACAAACCTGGTGCGATCGACCGTGGATGTTCTGTGGATATTGGAC
CGCCTGATCAGCGGGGTGCAGGAAGCCAAGGCGTCGAGAGGTGAAGAAGG
CGAGTCAGCTAATGGATTCTTGGACAAGTCGACCAAGAAGCTTATGTCAC
TTCGTGCTTCAGCGTGTGCTGCGCTGATGCCGGAGAAGACGCAGCCGCAG
CGTAGTAGCGCTGCTCAAGCGGCCGAGAATGACTTGCAGGTCTTGAGCAT
GCTTCAGGCTTACGAAATGATGGACGCGGGGTTAATGGCTAGTTTTATGG
AGGGGACAGCTATATTTGATGGATTTTATTAGCGTATCGACATGTCTTGA
CAACATCCAACCAATGCAGTGGACGGCACATATGGAAGAATGCCTTGAAG
CCCTGGCTCGAAAACGTGAAACGCCGCTTGACGAAGTGTTCGCTCATCAA
GTCCGACTGCACCGTATTGCAAGAGAGGCGGAGCATATTCGAATTGCATC
AACAGCCGTTCCAGCAGCTTTTCACCTCACAGCCTTGCAGCGGAAGGTCA
ATGAAGTCAAGCAAAGTATAACACCTGAACTGCGACAGAATAGCCTGTCT
AAATTGCTCAAAAGCCAAATGCAAATGCGTTGACCGACCAGGGGTCCAGG
GGTGCGAGAGATGCTATCGATTGAACAAGTCATGCCTGCGAGGGACGTCG
ACGAGAGCGATGCAGTCCCAGAAGAACAACACCGTCGCGCGCATTGCTCA
GCTAGAAGGGAAGCTGAATGAACTTGTGTCATCCCTCCAGCCGCATCGCG
CGCCAAGTAGCTGCAATAGTTCTATCGAAAACTCTCTTTCTGCTCCACTA
TCTAACTCCACTTCTCCTGCTACTTCTGGAGATGTATACACTGTCCCCGC
AGTGCCGACGTCTAATCTGGACAGCTTGGAGTTTTCACCGGAAGAGTCTC
TAGACATATTCCGAACTCGCATGCTTCAGTACTTTCCCTTTCTACATCTT
CCTAGCAACGCGCAATGGATGCGCCAGGAGCGGCCATTTTTGTTCCTCTG
CATTATGGCAGTGACATGTCCGTCAATACCGACCAAGCTCGCCTTAGGGG
AGAAGATCAGAAAGATTGCCACGGAAAGAATGTTTCTTTCGAGTGACCCG
GGGGCAGTGAACCTTGATCTCCTGCTAGGTCTTTTGACAGTTCTAGCCTG
GGGTTACGATCACTTACTACACGATACCGCAATGGGACTGCCGCGTTTTA
CTCAGCTCGCTATAACAGTTGTATACGAACTGCGTCTCAACAAGCCGCTT
CCTGATGACTCTAATGTACTTACTGCCGGGCTCGGTGGCTGCGCATCATC
GAGAGCACCGACTCGGACGCTTGAGGAGCAGCGAGCGGTCCTAGCATGTT
TTGTCTTGAGCTCAATATGGCCCCTCAGTCATACGGACGGGCCTGTTCCG
TGCCTCGACATATTACACCGAATTGAGCATCCACGGCCTGGTCCTCTCTA
AAAAGCAAGACACTCCAGACCTACAAAGGCTTGAAGGACTCCACGCATGT
CTCGAAACCGCCAGATCAGCCCTCGATAGCTTCTTCCAGATATCGTCCAC
TGATGATTATATCGGAATTTCATTCCTTTTCTTCAACTACCTCGCGCGGA
GCATCCTAGTCATCATGACGCTGTCGACGATGAACGACCCCATCTGGGAC
ACAAACCTGGTGCGATCGACCGTGGATGTTCTGTGGATATTGGACCGCCT
GATCAGCGGGGTGCAGGAAGCCAAGGCGTCGAGAGGTGAAGAAGGCGAGT
CAGCTAATGGATTCTTGGACAAGTCGACCAAGAAGCTTATGTCACTTCGT
GCTTCAGCGTGTGCTGCGCTGATGCCGGAGAAGACGCAGCCGCAGCGTAG
TAGCGCTGCTCAAGCGGCCGAGAATGACTTGCAGGTCTTGAGCATGCTTC
AGGCTTACGAAATGATGGACGCGGGGTTAATGGCTAGTTTTATGGAGGGG
ACAGCTATATTTGATGGATTTTATTAGCGTATCGACATGTCTTGACAACA
TCCAACCAATGCAGTGGACGGCACATATGGAAGAATGCCTTGAAGCCCTG
GCTCGAAAACGTGAAACGCCGCTTGACGAAGTGTTCGCTCATCAAGTCCG
ACTGCACCGTATTGCAAGAGAGGCGGAGCATATTCGAATTGCATCAACAG
CCGTTCCAGCAGCTTTTCACCTCACAGCCTTGCAGCGGAAGGTCAATGAA
GTCAAGCAAAGTATAACACCTGAACTGCGACAGAATAGCCTGTCTAAATT
GCTCAAAAGCCAAATGCAAATGCGTTGACCGACCAGGGGTCCAGGGGTGC
GAGAGATGCTATCGATTGAACAAGTCATGCCTGCGAGGGACGTCGACGAG
AGCGATGCAGTCCCAGAAGAACAACACCGTCGCGCGCATTGCTCAGCTAG
AAGGGAAGCTGAATGAACTTGTGTCATCCCTCCAGCCGCATCGCGCGCCA
AGTAGCTGCAATAGTTCTATCGAAAACTCTCTTTCTGCTCCACTATCTAA
CTCCACTTCTCCTGCTACTTCTGGAGATGTATACACTGTCCCCGCAGTGC
CGACGTCTAATCTGGACAGCTTGGAGTTTTCACCGGAAGAGTCTCTAGAC
ATATTCCGAACTCGCATGCTTCAGTACTTTCCCTTTCTACATCTTCCTAG
CAACGCGCAATGGATGCGCCAGGAGCGGCCATTTTTGTTCCTCTGCATTA
TGGCAGTGACATGTCCGTCAATACCGACCAAGCTCGCCTTAGGGGAGAAG
ATCAGAAAGATTGCCACGGAAAGAATGTTTCTTTCGAGTGACCCGGGGGC
AGTGAACCTTGATCTCCTGCTAGGTCTTTTGACAGTTCTAGCCTGGGGTT
ACGATCACTTACTACACGATACCGCAATGGGACTGCCGCGTTTTACTCAG
CTCGCTATAACAGTTGTATACGAACTGCGTCTCAACAAGCCGCTTCCTGA
TGACTCTAATGTACTTACTGCCGGGCTCGGTGGCTGCGCATCATCGAGAG
CACCGACTCGGACGCTTGAGGAGCAGCGAGCGGTCCTAGCATGTTTTGTC
TTGAGCTCAATATGGCCCCTCAGTCATACGGACGGGCCTGTTCCGTGCCT
CGACATATTACACCGAATTGAGCATCCACGGCCTGGTCCTCTCTAAAAAG
CAAGACACTCCAGACCTACAAAGGCTTGAAGGACTCCACGCATGTCTCGA
AACCGCCAGATCAGCCCTCGATAGCTTCTTCCAGATATCGTCCACTGATG
ATTATATCGGAATTTCATTCCTTTTCTTCAACTACCTCGCGCGGAGCATC
CTAGTCATCATGACGCTGTCGACGATGAACGACCCCATCTGGGACACAAA
CCTGGTGCGATCGACCGTGGATGTTCTGTGGATATTGGACCGCCTGATCA
GCGGGGTGCAGGAAGCCAAGGCGTCGAGAGGTGAAGAAGGCGAGTCAGCT
AATGGATTCTTGGACAAGTCGACCAAGAAGCTTATGTCACTTCGTGCTTC
AGCGTGTGCTGCGCTGATGCCGGAGAAGACGCAGCCGCAGCGTAGTAGCG
CTGCTCAAGCGGCCGAGAATGACTTGCAGGTCTTGAGCATGCTTCAGGCT
TACGAAATGATGGACGCGGGGTTAATGGCTAGTTTTATGGAGGGGACAGC
TATATTTGATGGATTTTATTAGCGTATCGACATGTCTTGACAACATCCAA
CCAATGCAGTGGACGGCACATATGGAAGAATGCCTTGAAGCCCTGGCTCG
AAAACGTGAAACGCCGCTTGACGAAGTGTTCGCTCATCAAGTCCGACTGC
ACCGTATTGCAAGAGAGGCGGAGCATATTCGAATTGCATCAACAGCCGTT
CCAGCAGCTTTTCACCTCACAGCCTTGCAGCGGAAGGTCAATGAAGTCAA
GCAAAGTATAACACCTGAACTGCGACAGAATAGCCTGTCTAAATTGCTCA
AAAGCCAAATGCAAATGCGTTGACCGACCAGGGGTCCAGGGGTGCGAGAG
ATGCTATCGATTGAACAAGTCATGCCTGCGAGGGACGTCGACGAGAGCGA
TGCAGTCCCAGAAGAACAACACCGTCGCGCGCATTGCTCAGCTAGAAGGG
AAGCTGAATGAACTTGTGTCATCCCTCCAGCCGCATCGCGCGCCAAGTAG
CTGCAATAGTTCTATCGAAAACTCTCTTTCTGCTCCACTATCTAACTCCA
CTTCTCCTGCTACTTCTGGAGATGTATACACTGTCCCCGCAGTGCCGACG
TCTAATCTGGACAGCTTGGAGTTTTCACCGGAAGAGTCTCTAGACATATT
CCGAACTCGCATGCTTCAGTACTTTCCCTTTCTACATCTTCCTAGCAACG
CGCAATGGATGCGCCAGGAGCGGCCATTTTTGTTCCTCTGCATTATGGCA
GTGACATGTCCGTCAATACCGACCAAGCTCGCCTTAGGGGAGAAGATCAG
AAAGATTGCCACGGAAAGAATGTTTCTTTCGAGTGACCCGGGGGCAGTGA
ACCTTGATCTCCTGCTAGGTCTTTTGACAGTTCTAGCCTGGGGTTACGAT
CACTTACTACACGATACCGCAATGGGACTGCCGCGTTTTACTCAGCTCGC
TATAACAGTTGTATACGAACTGCGTCTCAACAAGCCGCTTCCTGATGACT
CTAATGTACTTACTGCCGGGCTCGGTGGCTGCGCATCATCGAGAGCACCG
ACTCGGACGCTTGAGGAGCAGCGAGCGGTCCTAGCATGTTTTGTCTTGAG
CTCAATATGGCCCCTCAGTCATACGGACGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008424ATCC10864_008424Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008424-T1ATCC10864_008424-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008424-T1.cdsATCC10864_008424-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008424-T1.exon4ATCC10864_008424-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008424-T1.exon3ATCC10864_008424-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008424-T1.exon2ATCC10864_008424-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008424-T1.exon1ATCC10864_008424-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001138
InterProIPR036864
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:639680..641529 -
Powered by Drupal