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ATCC10864_008500-T1, ATCC10864_008500-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008500-T1
Unique NameATCC10864_008500-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:858359..860049+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008500-T1 ID=ATCC10864_008500-T1|Name=ATCC10864_008500-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1691bp|location=Sequence derived from alignment at MCQH01000199:858359..860049+ (Aspergillus niger ATCC 10864)
ATGCCGGATATCAATTCGTTGGACAGTGCTCGTCCTCTCGGCGGTGCGGT
GGCTGCTCATAGCTACTCGTCGCATCCGGAATCTAATCTTGAGGACCTGT
CTGGCCATGAAGAAATTCCTGGCCATCCTCTGGGCGTGAAACCCAGTGGC
AATGCCTTGCTCGCCGCAGAGAACCTGCGCCATGCAATTGGGACCTTTAA
TATCCTACCGGATGAGTCGATATTGATGTTGCTGGAATACCTCGACGGGC
CCAGTTTGTTGAATATTGGACAGTCATGCAAGGCATTTTATGCTTTTACC
AGAGCCGAGGATCTCTGGAAAGCTCTTTTTATCGGGTGAGATATAGATCT
ATTGTTCTTACATTATTGTTATTGTCTGCATCTGCTTGCGAGAGTACTGC
TCTTCTATTTCTGTTGCATTGTGGGACATGGCAATTTGCTCTCATCACAT
TTATAGATTTACAACTAGACGGCCTGGGGCATTGTACTAACGTTTCAGTT
AGGTCTCCTCCCGCTTCGTTCTCATGGAAAGGAACATGGCGTTCAACTTA
TCTTAACATTCCTCCATCGGAAGAGTGCATCCTGGACTGCTCGAATCTAT
TCTCGGATGTCCTGCACCGACCCTTTCACTGCGCCCACATATCTCTAGAT
CCCTACATCAAGAATATCCCTGCCCGCAACCAAATTGCTCGTCTCCCCGA
TCTCTCTTTCGAGGAGTTCAATGAAAAATGGAGCGATACGCCCTTCATCT
TGACTGAGCCGGTGAAACAATGGCCAGCGTACAAGAATTGGTCCGTAAAC
ATGCTACTAGATCACTACGGCGAGGTTGTCTTCCGTGCAGAGGCAGTGGA
TTGGCCTTTCCATACTTATGTCGATTACATGCACAACAACTCCGATGAGA
GTCCTCTTTACCTGTTCGACCGGGCCTTTGTCTCGAAGATGGGCCTTAAG
GTCGGTCAACCGGACCAGGAGCCTGAAGCCACTTACTGGCCTCCCGGTTG
CTTTGGAGAAGACTTCTTCTCCGTGCTGGGCAACGATCGCCCTGACAGGC
AGTGGCTGATCATTGGACCCGAGCGGTCTGGAAGTACATTTCACAAGGAC
CCGAACGCTACCAGTGCCTGGAACGCGGTTGTCCGTGGCTCGAAGTACTG
GATCATGTTCCCGTCGTCTTCGAAGCTCCCGCCGCCTCCGGGTGTCTATG
TGTCAGACGATCAGAGTGAAGTGACTTCCCCTCTTAGCATTGCTGAGTGG
CTTTTTGGCTTCCACGCAGAGGCACGACGCACTCCAGGCTGTATTGAGGG
GATCTGTCACGAGGGGGAGATTCTCCACGTTCCTTCGGGATGGTGGCACT
TGGTCGTCAACATCGAGCCGGCTATTGCCATTACTCAGAACTTCATACCC
CGTGCCCATCTGAGCGCTGCGCTGGACTTCTTGTCTAACAAGGCCGACCA
GATTTCAGGTTTCAGGAAGGACGTAAACAATCCTTACGAACGGTTTGTGG
CGCAGATGCAGAAATCGCACCCTGAACTCTTGGAACAGGCGCAGGCAGAG
CTGCAGAAGAAGAACGAGGGGAAGAAACGGAAATGGGACGAAATTGTGCA
CGGAAACCCTGAGCAAGACGGAGGGGAGGCCGCCGAAGGAGGCGGTTTCA
GCTTTGGGTTTGGAGATGACAGCGATGTTGAAGTCCCCTAA
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Coding sequence (CDS) from alignment at MCQH01000199:858359..860049+

>ATCC10864_008500-T1 ID=ATCC10864_008500-T1|Name=ATCC10864_008500-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3048bp|location=Sequence derived from alignment at MCQH01000199:858359..860049+ (Aspergillus niger ATCC 10864)
ATGCCGGATATCAATTCGTTGGACAGTGCTCGTCCTCTCGGCGGTGCGGT
GGCTGCTCATAGCTACTCGTCGCATCCGGAATCTAATCTTGAGGACCTGT
CTGGCCATGAAGAAATTCCTGGCCATCCTCTGGGCGTGAAACCCAGTGGC
AATGCCTTGCTCGCCGCAGAGAACCTGCGCCATGCAATTGGGACCTTTAA
TATCCTACCGGATGAGTCGATATTGATGTTGCTGGAATACCTCGACGGGC
CCAGTTTGTTGAATATTGGACAGTCATGCAAGGCATTTTATGCTTTTACC
AGAGCCGAGGATCTCTGGAAAGCTCTTTTTATCGGGTCTCCTCCCGCTTC
GTTCTCATGGAAAGGAACATGGCGTTCAACTTATCTTAACATTCCTCCAT
CGGAAGAGTGCATCCTGGACTGCTCGAATCTATTCTCGGATGTCCTGCAC
CGACCCTTTCACTGCGCCCACATATCTCTAGATCCCTACATCAAGAATAT
CCCTGCCCGCAACCAAATTGCTCGTCTCCCCGATCTCTCTTTCGAGGAGT
TCAATGAAAAATGGAGCGATACGCCCTTCATCTTGACTGAGCCGGTGAAA
CAATGGCCAGCGTACAAGAATTGGTCCGTAAACATGCTACTAGATCACTA
CGGCGAGGTTGTCTTCCGTGCAGAGGCAGTGGATTGGCCTTTCCATACTT
ATGTCGATTACATGCACAACAACTCCGATGAGAGTCCTCTTTACCTGTTC
GACCGGGCCTTTGTCTCGAAGATGGGCCTTAAGGTCGGTCAACCGGACCA
GGAGCCTGAAGCCACTTACTGGCCTCCCGGTTGCTTTGGAGAAGACTTCT
TCTCCGTGCTGGGCAACGATCGCCCTGACAGGCAGTGGCTGATCATTGGA
CCCGAGCGGTCTGGAAGTACATTTCACAAGGACCCGAACGCTACCAGTGC
CTGGAACGCGGTTGTCCGTGGCTCGAAGTACTGGATCATGTTCCCGTCGT
CTTCGAAGCTCCCGCCGCCTCCGGGTGTCTATGTGTCAGACGATCAGAGT
GAAGTGACTTCCCCTCTTAGCATTGCTGAGTGGCTTTTTGGCTTCCACGC
AGAGGCACGACGCACTCCAGGCTGTATTGAGGGGATCTGTCACGAGGGGG
AGATTCTCCACGTTCCTTCGGGATGGTGGCACTTGGTCGTCAACATCGAG
CCGGCTATTGCCATTACTCAGAACTTCATACCCCGTGCCCATCTGAGCGC
TGCGCTGGACTTCTTGTCTAACAAGGCCGACCAGATTTCAGGTTTCAGGA
AGGACGTAAACAATCCTTACGAACGGTTTGTGGCGCAGATGCAGAAATCG
CACCCTGAACTCTTGGAACAGGCGCAGGCAGAGCTGCAGAAGAAGAACGA
GGGGAAGAAACGGAAATGGGACGAAATTGTGCACGGAAACCCTGAGCAAG
ACGGAGGGGAGGCCGCCGAAGGAGGCGGTTTCAGCTTTGGGTTTGGAGAT
GACAGCGATGTTGAAGTCCCCTAAATGCCGGATATCAATTCGTTGGACAG
TGCTCGTCCTCTCGGCGGTGCGGTGGCTGCTCATAGCTACTCGTCGCATC
CGGAATCTAATCTTGAGGACCTGTCTGGCCATGAAGAAATTCCTGGCCAT
CCTCTGGGCGTGAAACCCAGTGGCAATGCCTTGCTCGCCGCAGAGAACCT
GCGCCATGCAATTGGGACCTTTAATATCCTACCGGATGAGTCGATATTGA
TGTTGCTGGAATACCTCGACGGGCCCAGTTTGTTGAATATTGGACAGTCA
TGCAAGGCATTTTATGCTTTTACCAGAGCCGAGGATCTCTGGAAAGCTCT
TTTTATCGGGTCTCCTCCCGCTTCGTTCTCATGGAAAGGAACATGGCGTT
CAACTTATCTTAACATTCCTCCATCGGAAGAGTGCATCCTGGACTGCTCG
AATCTATTCTCGGATGTCCTGCACCGACCCTTTCACTGCGCCCACATATC
TCTAGATCCCTACATCAAGAATATCCCTGCCCGCAACCAAATTGCTCGTC
TCCCCGATCTCTCTTTCGAGGAGTTCAATGAAAAATGGAGCGATACGCCC
TTCATCTTGACTGAGCCGGTGAAACAATGGCCAGCGTACAAGAATTGGTC
CGTAAACATGCTACTAGATCACTACGGCGAGGTTGTCTTCCGTGCAGAGG
CAGTGGATTGGCCTTTCCATACTTATGTCGATTACATGCACAACAACTCC
GATGAGAGTCCTCTTTACCTGTTCGACCGGGCCTTTGTCTCGAAGATGGG
CCTTAAGGTCGGTCAACCGGACCAGGAGCCTGAAGCCACTTACTGGCCTC
CCGGTTGCTTTGGAGAAGACTTCTTCTCCGTGCTGGGCAACGATCGCCCT
GACAGGCAGTGGCTGATCATTGGACCCGAGCGGTCTGGAAGTACATTTCA
CAAGGACCCGAACGCTACCAGTGCCTGGAACGCGGTTGTCCGTGGCTCGA
AGTACTGGATCATGTTCCCGTCGTCTTCGAAGCTCCCGCCGCCTCCGGGT
GTCTATGTGTCAGACGATCAGAGTGAAGTGACTTCCCCTCTTAGCATTGC
TGAGTGGCTTTTTGGCTTCCACGCAGAGGCACGACGCACTCCAGGCTGTA
TTGAGGGGATCTGTCACGAGGGGGAGATTCTCCACGTTCCTTCGGGATGG
TGGCACTTGGTCGTCAACATCGAGCCGGCTATTGCCATTACTCAGAACTT
CATACCCCGTGCCCATCTGAGCGCTGCGCTGGACTTCTTGTCTAACAAGG
CCGACCAGATTTCAGGTTTCAGGAAGGACGTAAACAATCCTTACGAACGG
TTTGTGGCGCAGATGCAGAAATCGCACCCTGAACTCTTGGAACAGGCGCA
GGCAGAGCTGCAGAAGAAGAACGAGGGGAAGAAACGGAAATGGGACGAAA
TTGTGCACGGAAACCCTGAGCAAGACGGAGGGGAGGCCGCCGAAGGAGGC
GGTTTCAGCTTTGGGTTTGGAGATGACAGCGATGTTGAAGTCCCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008500ATCC10864_008500Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008500-T1.exon1ATCC10864_008500-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008500-T1.exon2ATCC10864_008500-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008500-T1.cdsATCC10864_008500-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008500-T1ATCC10864_008500-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR041667
PFAMPF12937
InterProIPR036047
PFAMPF02373
PFAMPF13621
InterProIPR003347
InterProIPR001810
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:858359..860049 +
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