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ATCC10864_008525-T1, ATCC10864_008525-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008525-T1
Unique NameATCC10864_008525-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:927951..929291+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008525-T1 ID=ATCC10864_008525-T1|Name=ATCC10864_008525-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1341bp|location=Sequence derived from alignment at MCQH01000199:927951..929291+ (Aspergillus niger ATCC 10864)
ATGGCCTCTCTAACTACTCCTCCCCGCGTCCCCATCCCCGCCAACGGGGT
CGACTACCGTGGCAAAGTAGTCCTGGCCCCTATGGTGCGCTCCGGCGAAT
TGCCCTCCCGCCTCATTGCCCTCAAGTATGGCGCCGATCTAGTTTGGGGC
CCTGAAACTATCGACCGGGCTATGGCAGGCGCCATCCGCCGTGTGAACCC
CCGCAACGGCACCATCGAATTCACCCGCATGCCCTCCAACGGCGGCCGCA
CCGAAAAGGCAGGCCAAGAATCCGTGATCTACCGTCTCGACCCCGTCCGC
GAGAAAGGCAAACTCATTTATCAAATTGGCACTGCGACGCCTGAAATCGC
CGTCCAAGCAGCCAAACTCGTCGCGGGCGATGTCGCCGGTATCGACGTGA
ACTCGGGATGTCCGAAACCCTTTAGCACGAGCGGTGGTATGGGTGCGGCG
CTTCTCAAGACACCGGATAAGTTGGTTGCGATTCTGGAAGCCCTGGTGAA
GGAGGTCGGGACGCCATTCCAGATCGGTATCTCGGTCAAGATCCGCATTT
TGAAAGATCCCGAGGAGACGAGAGCTCTGGTGTCGCGGCTCGTGAAGACA
GGCATTACGGGCTTGACAGTGCATTGTCGGACGCCGCCCATGAGGCCGCG
TGAACGCGCTATCCGTGATCAGGTGCGCATGATTGCCGACATCTGTCATG
AGGCTGGTGTCGCATGCGTTATAAACGGTGATGTAACCTCCAAAGATGAG
GGACACGCCTTGATGAAAGAGTTCGGCGTCGACGGCGCGATGATCGCCAC
AGCCGCAGAAGCAAACCCATCCTGCTTCCGTACCGAAGCCGAGGGCGGCC
TTCTCCCCTGGAAGGAGGTAGTCCACGAATATATCAAGTTCTGCCTCGAG
TCTGAGAACCGCTTCGGCAACTCCAAATATCTCCTCAACATCCTCGTCCC
CGGCAAGCTCCAGGAAGGCAAGCTTGCAAAGGCAGCCAGGTCCTATGCCG
ATACATGCCACGCCCTCGGATTCGAGGATCTCCTTCCCCTCGCCATGCAA
GTGGACGACATCCTCAACCTCACCGACAAGTCAGTCACTACCAAAGACCT
CCAGTCCGAACACACCCGCAGCAAGGCCGTTCAGAACGCCATGGAGAACA
ACGAATCCGCGCGGGCTGCTGGCGGTGCTTCTCGCGTCAAGTCCACCTCC
CCCGCAGTCAGCGCAGGCGGCCCCATTCGCACGAACTCCATCCCAGCTCC
TACGAAGACCAAGGCTGAGGCGGAGACCCAGGCCGATGTCTCTGTTCCGG
CTCCCGAAGCTGCGCCTCAGAAGCAGGAGCTGACAGCTTAA
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Coding sequence (CDS) from alignment at MCQH01000199:927951..929291+

>ATCC10864_008525-T1 ID=ATCC10864_008525-T1|Name=ATCC10864_008525-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1341bp|location=Sequence derived from alignment at MCQH01000199:927951..929291+ (Aspergillus niger ATCC 10864)
ATGGCCTCTCTAACTACTCCTCCCCGCGTCCCCATCCCCGCCAACGGGGT
CGACTACCGTGGCAAAGTAGTCCTGGCCCCTATGGTGCGCTCCGGCGAAT
TGCCCTCCCGCCTCATTGCCCTCAAGTATGGCGCCGATCTAGTTTGGGGC
CCTGAAACTATCGACCGGGCTATGGCAGGCGCCATCCGCCGTGTGAACCC
CCGCAACGGCACCATCGAATTCACCCGCATGCCCTCCAACGGCGGCCGCA
CCGAAAAGGCAGGCCAAGAATCCGTGATCTACCGTCTCGACCCCGTCCGC
GAGAAAGGCAAACTCATTTATCAAATTGGCACTGCGACGCCTGAAATCGC
CGTCCAAGCAGCCAAACTCGTCGCGGGCGATGTCGCCGGTATCGACGTGA
ACTCGGGATGTCCGAAACCCTTTAGCACGAGCGGTGGTATGGGTGCGGCG
CTTCTCAAGACACCGGATAAGTTGGTTGCGATTCTGGAAGCCCTGGTGAA
GGAGGTCGGGACGCCATTCCAGATCGGTATCTCGGTCAAGATCCGCATTT
TGAAAGATCCCGAGGAGACGAGAGCTCTGGTGTCGCGGCTCGTGAAGACA
GGCATTACGGGCTTGACAGTGCATTGTCGGACGCCGCCCATGAGGCCGCG
TGAACGCGCTATCCGTGATCAGGTGCGCATGATTGCCGACATCTGTCATG
AGGCTGGTGTCGCATGCGTTATAAACGGTGATGTAACCTCCAAAGATGAG
GGACACGCCTTGATGAAAGAGTTCGGCGTCGACGGCGCGATGATCGCCAC
AGCCGCAGAAGCAAACCCATCCTGCTTCCGTACCGAAGCCGAGGGCGGCC
TTCTCCCCTGGAAGGAGGTAGTCCACGAATATATCAAGTTCTGCCTCGAG
TCTGAGAACCGCTTCGGCAACTCCAAATATCTCCTCAACATCCTCGTCCC
CGGCAAGCTCCAGGAAGGCAAGCTTGCAAAGGCAGCCAGGTCCTATGCCG
ATACATGCCACGCCCTCGGATTCGAGGATCTCCTTCCCCTCGCCATGCAA
GTGGACGACATCCTCAACCTCACCGACAAGTCAGTCACTACCAAAGACCT
CCAGTCCGAACACACCCGCAGCAAGGCCGTTCAGAACGCCATGGAGAACA
ACGAATCCGCGCGGGCTGCTGGCGGTGCTTCTCGCGTCAAGTCCACCTCC
CCCGCAGTCAGCGCAGGCGGCCCCATTCGCACGAACTCCATCCCAGCTCC
TACGAAGACCAAGGCTGAGGCGGAGACCCAGGCCGATGTCTCTGTTCCGG
CTCCCGAAGCTGCGCCTCAGAAGCAGGAGCTGACAGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008525ATCC10864_008525Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008525-T1.exon1ATCC10864_008525-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008525-T1.cdsATCC10864_008525-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008525-T1ATCC10864_008525-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018517
PFAMPF01207
InterProIPR013785
InterProIPR035587
Properties
Property NameValue
NoteBUSCO:EOG092628FW
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:927951..929291 +
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