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ATCC10864_008532-T1, ATCC10864_008532-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008532-T1
Unique NameATCC10864_008532-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:946761..948131-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008532-T1 ID=ATCC10864_008532-T1|Name=ATCC10864_008532-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1371bp|location=Sequence derived from alignment at MCQH01000199:946761..948131- (Aspergillus niger ATCC 10864)
ATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAG
CCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGT
CTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGTGGGTT
GGATGGAGGAGCCCCAAAGGTCTCAATCGATGATGATCTATCTCGGATTT
CTGGAGAAGCTATTAATCCGGTGCAGACCCCAAGACGGTTTAGTGTCCCG
TAGGCGGTCTGCAACTCTTCCCCATCACGGGACTTCGGCTTGCCCTGGGG
TGGTCCGGCTCGCTAAGCGTCCCGTTTGGGGTTAGGGCGAGCCGCACCGA
ACACACCTCGCAATTTGTGAGCCTTGTGCGTTGTCCCGTTACCCTATCGA
AGCGACGACAACCACGACAACCCGGACGACTTTTGCGGGTCATACCTCCC
TTCCTTCGACTTGTTTGCGTTGCCCGCTGCTGCTCAGAGAAACGCCGTCA
GAATGCCTTCGGAACAAGGTCACAGACGTGAGTGCCATCATTTTCCGGAT
ATCAGACATGTGTGCGCGATGGTTGGAATATGGGGATGCCGGAGGATAGA
TGGGAATTTGCGGGCGCAACCTGGGCGAAGTGCTGAATGAAATGCTAACT
CGAGATTTTTGCGAAATATAGTCTATGTCAAGTAAGTTTACCACAAACCG
TCCGCCGTCGAATCCGCGCACATTCCGGATATGAATATCAAAAATATCAA
AATACATGTCGGGACATCAGAGATACGGGCCAAGCGAAGGAATGCAACGA
GAACAGACCGGTTAATACGAATTCTTTCTACAGGGGTCGCCACGTGAGCT
ACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGGTACTTGCGATCC
GCACCGATATCGATATAGAGGAACAAGGGAATCTGACACATGGGTTATCT
AGTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAAGTGAGT
AGCGAACGGGTTCGGAATGGGAATATCAGAACACACAGCTAAGACGACAT
TCTTTTACAGCTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCC
AAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTAC
CCGTCCCCACGGTATGTGATGCTCAGCTCCAATGCGCGATGATTACGATG
GAATATTTCAATACTATCGGTGATTGTTGGAACCGAGAACGGCGGGAAAC
TAACGATATTTCCTCATGAACAGGTAACTCCGGTGTTGTCCGTGCTCAGT
TCCGCCACAACCTCCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTTATG
CTGTACCCCTCCAACATCTAA
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Coding sequence (CDS) from alignment at MCQH01000199:946761..948131-

>ATCC10864_008532-T1 ID=ATCC10864_008532-T1|Name=ATCC10864_008532-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2190bp|location=Sequence derived from alignment at MCQH01000199:946761..948131- (Aspergillus niger ATCC 10864)
GTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAG
ACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCTAACT
TCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTC
CGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGT
CTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAAGGGTCGCCA
CGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGATGGG
TGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAGCCAAA
AGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGTCTTCG
GACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGTAACTCCGGTG
TTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCAAGACCTTCGGTGCT
ACCGTCCGTGTTATGCTGTACCCCTCCAACATCTAACTTCTACCTGGGCA
AGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCCAAC
ATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGTCTGATCAAGATC
GACGGTGTTGAGAGCACCGAGGCCGCAAAGGGTCGCCACGTGAGCTACCA
GCGCTCCAAGCGTACCGTCAACCCCAACACCAGATGGGTGGAAAGAAATC
CGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAGCCAAAAGCTCTCTCCGC
CGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGTCTTCGGACTACAGTAGC
CCGGACGGCAAAATTGGCCAGGTGGGGTAACTCCGGTGTTGTCCGTGCTC
AGTTCCGCCACAACCTCCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTT
ATGCTGTACCCCTCCAACATCTAACTTCTACCTGGGCAAGAAGGTTGCTT
TCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATC
TGGGGCAAGGTTACCCGTCCCCACGTCTGATCAAGATCGACGGTGTTGAG
AGCACCGAGGCCGCAAAGGGTCGCCACGTGAGCTACCAGCGCTCCAAGCG
TACCGTCAACCCCAACACCAGATGGGTGGAAAGAAATCCGCAAGCTGTTT
TGTCAGCTTGGGGCGCTCTAGCCAAAAGCTCTCTCCGCCGCTGCAGAGGG
GACCGGCGGGTAGCCAGGAGTCTTCGGACTACAGTAGCCCGGACGGCAAA
ATTGGCCAGGTGGGGTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACA
ACCTCCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCC
TCCAACATCTAACTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGG
CCAAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTT
ACCCGTCCCCACGTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCC
GCAAAGGGTCGCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCC
CAACACCAGATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGG
GCGCTCTAGCCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTA
GCCAGGAGTCTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTG
GGGTAACTCCGGTGTTGTCCGTGCTCAGTTCCGCCACAACCTCCCCCCCA
AGACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCTAA
CTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGG
TCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCAC
GTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAAGGGTCGC
CACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGATG
GGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAGCCA
AAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGTCTT
CGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL33BATCC10864_008532Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008532-T1ATCC10864_008532-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008532-T1.cdsATCC10864_008532-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008532-T1.exon5ATCC10864_008532-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_008532-T1.exon4ATCC10864_008532-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008532-T1.exon3ATCC10864_008532-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008532-T1.exon2ATCC10864_008532-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008532-T1.exon1ATCC10864_008532-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018266
InterProIPR001780
InterProIPR038661
InterProIPR009000
PFAMPF01247
Properties
Property NameValue
Product60S ribosomal protein L33B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:946761..948131 -
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