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ATCC10864_008552-T1, ATCC10864_008552-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008552-T1
Unique NameATCC10864_008552-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1000552..1001805-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008552-T1 ID=ATCC10864_008552-T1|Name=ATCC10864_008552-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1254bp|location=Sequence derived from alignment at MCQH01000199:1000552..1001805- (Aspergillus niger ATCC 10864)
ATGCGGCCTATTTTGCTCTCCGGCCATGTGCGTTTCGCCTATACCCACCC
CCGAACGCGATGATGGTCGCCCAGGAGCTAGGAACATGATATGAAAATCG
GGAAATAAAAGGGAATAAGGACGGGTCGCTGATTGATTTTTTGCTTAATA
GGAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCGATCTTATCT
TCTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGC
GAGCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTGGACGGTCGA
TGTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCG
TGCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTC
CCTACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTT
GGCTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGG
ATATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTG
CGCATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACAT
GGGCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACG
ATGGAAAGGTGCGGAGAAATGCTTGTGTTTTGTTATGCATTTGGGGCTAG
ATGCTAACTGGGTGATGACAGACCGGTGAGCAGCTGGAGAACGTCCAGGC
CCACGAGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCA
CCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGGTACATAAGCCT
GCTACTATGCATGTCAAACGATTTTAAATGCTAACTCAACCCAGCTCATG
TCTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACACTCCCCT
GAACAGCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTGGGAGGTG
GTCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGGTAAGTTC
GAGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTCGTGTCCG
TGGTCATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCCGGTACTG
CCTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCACTTCGAC
AAGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGCTGAGGAA
GTGA
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Coding sequence (CDS) from alignment at MCQH01000199:1000552..1001805-

>ATCC10864_008552-T1 ID=ATCC10864_008552-T1|Name=ATCC10864_008552-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4044bp|location=Sequence derived from alignment at MCQH01000199:1000552..1001805- (Aspergillus niger ATCC 10864)
CTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACAC
TCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTGG
GAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGGT
AAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTCG
TGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCCG
GTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCAC
TTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGCT
GAGGAAGTGAACCGGTGAGCAGCTGGAGAACGTCCAGGCCCACGAGTTCG
ACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCACCTACTTCATC
ACTGCCTCCAAGGACAAGTCCGCCAAGGAACGGTCTCTGAACCAAATCAA
GTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAAGGATAAAATTG
TGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTACCTACAATGGA
CACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAACACTCAGATTCT
GGCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAACGTGAAGACCG
GCGAGTGCATCAAGGTGTGGGACTTCCCTACGGCCGTCAAGCGGGTCGAG
TTCACCCCCGATGGAAGCAGACTGTTGGCTGTGACGGAGAAGCGTATGGG
TTTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGGCGAGAACTTGA
CGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCACAGAGAGCAAG
GCAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATCATTGCTGGTCA
CGAAGACGGCAGTGTCAGCCAGTACGATGGAAAGATGCGGCCTATTTTGC
TCTCCGGCCATCTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTAT
GTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTA
CGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGG
CCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGAC
GAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACAT
CCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCC
GTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAG
CGCGAGCAGCTGAGGAAGTGAACCGGTGAGCAGCTGGAGAACGTCCAGGC
CCACGAGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCA
CCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGGAACGGTCTCTG
AACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAA
GGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTA
CCTACAATGGACACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAAC
ACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAA
CGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTCCCTACGGCCGTCA
AGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTTGGCTGTGACGGAG
AAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGG
CGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCA
CAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATC
ATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGATGGAAAGATGCG
GCCTATTTTGCTCTCCGGCCATCTCATGTCTACCCGTAACCTCGCCATCC
TCAAAACCTATGTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCCC
AAGAAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCAC
CACGACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAGG
TCTTCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAAC
ACGGTTCACATCCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGGA
CGGTTACGTCCGTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATGT
ACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGAACCGGTGAGCAGCTGGAG
AACGTCCAGGCCCACGAGTTCGACCACCAGATCAACGACATCCAGTTCTC
CGCCGACCGCACCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGG
AACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTTC
TCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCGA
GCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTGGACGGTCGATG
TGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGTG
CGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTCCC
TACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTTGG
CTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGGAT
ATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCG
CATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATGG
GCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGAT
GGAAAGATGCGGCCTATTTTGCTCTCCGGCCATCTCATGTCTACCCGTAA
CCTCGCCATCCTCAAAACCTATGTTGCCGACACTCCCCTGAACAGCGCCA
CCATTACGCCCAAGAAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGCC
ATGGATGTCACCACGACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTTT
CTACCACAAGGTCTTCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTCG
GTCCCCTCAACACGGTTCACATCCACCCCGCCGGTACTGCCTACGCCTCT
GGAGGTGAGGACGGTTACGTCCGTGTGCACCACTTCGACAAGCCCTACTT
CGACTTCATGTACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGAACCGGTG
AGCAGCTGGAGAACGTCCAGGCCCACGAGTTCGACCACCAGATCAACGAC
ATCCAGTTCTCCGCCGACCGCACCTACTTCATCACTGCCTCCAAGGACAA
GTCCGCCAAGGAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCG
ATCTTATCTTCTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCG
GCCAACGGCGAGCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTG
GACGGTCGATGTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAG
ACAACACCGTGCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTG
TGGGACTTCCCTACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAG
CAGACTGTTGGCTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTG
CGGTGTTGGATATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAG
CCTAGCTTGCGCATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTG
GAGTTACATGGGCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCA
GCCAGTACGATGGAAAGATGCGGCCTATTTTGCTCTCCGGCCAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF34ATCC10864_008552Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008552-T1ATCC10864_008552-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008552-T1.cdsATCC10864_008552-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008552-T1.exon4ATCC10864_008552-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008552-T1.exon3ATCC10864_008552-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008552-T1.exon2ATCC10864_008552-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008552-T1.exon1ATCC10864_008552-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR036322
InterProIPR027525
PFAMPF00400
Properties
Property NameValue
NoteBUSCO:EOG09262W7C
Producttranslation initiation factor eIF3 subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1000552..1001805 -
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