You are here

Home

ATCC10864_008601-T1, ATCC10864_008601-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008601-T1
Unique NameATCC10864_008601-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1143199..1144369+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008601-T1 ID=ATCC10864_008601-T1|Name=ATCC10864_008601-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1171bp|location=Sequence derived from alignment at MCQH01000199:1143199..1144369+ (Aspergillus niger ATCC 10864)
ATGACTATTGTCCGTCAGACCGAACACCCAGTGGAGGTCCATGATACCGG
CCTCCCACAGAACAACTGGAGTACACCCGGTCGAGCCGCATACGACTTCC
GGTCTGATTTCGTTACCTCCCCGAATATGAGCATGCTCGAATCCATCGTC
AACACAACACTTCTCGACGATGAGATGATGGAGGATCCAACCACTAACTA
TTTCCAGGAGTGGATGGCTCAGTTGACAGGCCATGAAAGGGCGCTCCTTA
CTTATTCGGGAACTATGAGCAACCAGGTGGCACTCCGGACGGCTCTCACC
ACCCCACCATACTCCATCCTTGCAGACCATCGCAGCCATATCCTGAACAT
GGAGGCAGGTGGGGCAGCGACTGTTTGTGGCGCTCTAATTCACGGTGTCA
TCCCAGCAAATGGCCATCATTTGACGCTGGGAGACATCAAGAAGCACTTT
GTCTTCAAGAAAGATATCTGTGAGTGATATGACGTGTTGATTTACTTGTT
CTAATACTGCGTGTATAGATGACTGCCCCACTCGCGTTATAAGCCTCGAG
AACACCCTCTTCGGAACGATTATGCCCCTTGACGAAGTCCGAGATATCTC
AATGTGGGCTAAGACCCAAGACCCACCGGTTCACATGCATCTCGATGGAG
CAAGACTTTGGGAGGCCGTCGCTGCAGGTGCAGGTGCTCTTAATGAGTTT
TGTGCCTGCTTTGACAGCGTTTCGCTGTGCTTCACCAAGGGTCTGGGAGC
ACCCATCGGATCTGTGATTGTAGGAAACACAGAATTCATCACAAGGGCAA
GGTGGATGCGTAAGCTGCTCGGTGGTGGACTGCGCCAAACAGGGATCATT
TCGGCGCCGATGTGCGTTGCACTCGAGGAAGTGTTCTTAGGGGGCAAGCT
GAAACGGTGTCAAGAGAGAGCGAAATATATCTCTACAATGTGGGAACGTC
TAGGTGGGTCTTTGCTAAGACCCACAGAGACAAACATGATGTGGATGAAC
CTGAACGATGGAAATGTCGACAAGAAAGCATTCCAAAAAGTAGCAAAAGA
GCTAGGGCTCAAGGTGCACGAAAAAGAGCGCTTAGAAGGACGATTGGTAG
TGCATTATCAGATATCTGATGACGCTATCAAGAAGTTGGAAATTGCGATG
AGGGCTGCATTGAGTTGTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:1143199..1144369+

>ATCC10864_008601-T1 ID=ATCC10864_008601-T1|Name=ATCC10864_008601-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2244bp|location=Sequence derived from alignment at MCQH01000199:1143199..1144369+ (Aspergillus niger ATCC 10864)
ATGACTATTGTCCGTCAGACCGAACACCCAGTGGAGGTCCATGATACCGG
CCTCCCACAGAACAACTGGAGTACACCCGGTCGAGCCGCATACGACTTCC
GGTCTGATTTCGTTACCTCCCCGAATATGAGCATGCTCGAATCCATCGTC
AACACAACACTTCTCGACGATGAGATGATGGAGGATCCAACCACTAACTA
TTTCCAGGAGTGGATGGCTCAGTTGACAGGCCATGAAAGGGCGCTCCTTA
CTTATTCGGGAACTATGAGCAACCAGGTGGCACTCCGGACGGCTCTCACC
ACCCCACCATACTCCATCCTTGCAGACCATCGCAGCCATATCCTGAACAT
GGAGGCAGGTGGGGCAGCGACTGTTTGTGGCGCTCTAATTCACGGTGTCA
TCCCAGCAAATGGCCATCATTTGACGCTGGGAGACATCAAGAAGCACTTT
GTCTTCAAGAAAGATATCTATGACTGCCCCACTCGCGTTATAAGCCTCGA
GAACACCCTCTTCGGAACGATTATGCCCCTTGACGAAGTCCGAGATATCT
CAATGTGGGCTAAGACCCAAGACCCACCGGTTCACATGCATCTCGATGGA
GCAAGACTTTGGGAGGCCGTCGCTGCAGGTGCAGGTGCTCTTAATGAGTT
TTGTGCCTGCTTTGACAGCGTTTCGCTGTGCTTCACCAAGGGTCTGGGAG
CACCCATCGGATCTGTGATTGTAGGAAACACAGAATTCATCACAAGGGCA
AGGTGGATGCGTAAGCTGCTCGGTGGTGGACTGCGCCAAACAGGGATCAT
TTCGGCGCCGATGTGCGTTGCACTCGAGGAAGTGTTCTTAGGGGGCAAGC
TGAAACGGTGTCAAGAGAGAGCGAAATATATCTCTACAATGTGGGAACGT
CTAGGTGGGTCTTTGCTAAGACCCACAGAGACAAACATGATGTGGATGAA
CCTGAACGATGGAAATGTCGACAAGAAAGCATTCCAAAAAGTAGCAAAAG
AGCTAGGGCTCAAGGTGCACGAAAAAGAGCGCTTAGAAGGACGATTGGTA
GTGCATTATCAGATATCTGATGACGCTATCAAGAAGTTGGAAATTGCGAT
GAGGGCTGCATTGAGTTGTTGAATGACTATTGTCCGTCAGACCGAACACC
CAGTGGAGGTCCATGATACCGGCCTCCCACAGAACAACTGGAGTACACCC
GGTCGAGCCGCATACGACTTCCGGTCTGATTTCGTTACCTCCCCGAATAT
GAGCATGCTCGAATCCATCGTCAACACAACACTTCTCGACGATGAGATGA
TGGAGGATCCAACCACTAACTATTTCCAGGAGTGGATGGCTCAGTTGACA
GGCCATGAAAGGGCGCTCCTTACTTATTCGGGAACTATGAGCAACCAGGT
GGCACTCCGGACGGCTCTCACCACCCCACCATACTCCATCCTTGCAGACC
ATCGCAGCCATATCCTGAACATGGAGGCAGGTGGGGCAGCGACTGTTTGT
GGCGCTCTAATTCACGGTGTCATCCCAGCAAATGGCCATCATTTGACGCT
GGGAGACATCAAGAAGCACTTTGTCTTCAAGAAAGATATCTATGACTGCC
CCACTCGCGTTATAAGCCTCGAGAACACCCTCTTCGGAACGATTATGCCC
CTTGACGAAGTCCGAGATATCTCAATGTGGGCTAAGACCCAAGACCCACC
GGTTCACATGCATCTCGATGGAGCAAGACTTTGGGAGGCCGTCGCTGCAG
GTGCAGGTGCTCTTAATGAGTTTTGTGCCTGCTTTGACAGCGTTTCGCTG
TGCTTCACCAAGGGTCTGGGAGCACCCATCGGATCTGTGATTGTAGGAAA
CACAGAATTCATCACAAGGGCAAGGTGGATGCGTAAGCTGCTCGGTGGTG
GACTGCGCCAAACAGGGATCATTTCGGCGCCGATGTGCGTTGCACTCGAG
GAAGTGTTCTTAGGGGGCAAGCTGAAACGGTGTCAAGAGAGAGCGAAATA
TATCTCTACAATGTGGGAACGTCTAGGTGGGTCTTTGCTAAGACCCACAG
AGACAAACATGATGTGGATGAACCTGAACGATGGAAATGTCGACAAGAAA
GCATTCCAAAAAGTAGCAAAAGAGCTAGGGCTCAAGGTGCACGAAAAAGA
GCGCTTAGAAGGACGATTGGTAGTGCATTATCAGATATCTGATGACGCTA
TCAAGAAGTTGGAAATTGCGATGAGGGCTGCATTGAGTTGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008601ATCC10864_008601Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008601-T1.exon1ATCC10864_008601-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008601-T1.exon2ATCC10864_008601-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008601-T1.cdsATCC10864_008601-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008601-T1ATCC10864_008601-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015424
InterProIPR015422
InterProIPR001597
PFAMPF01212
InterProIPR023603
InterProIPR015421
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1143199..1144369 +
Powered by Drupal