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ATCC10864_008763-T1, ATCC10864_008763-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008763-T1
Unique NameATCC10864_008763-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1632304..1634307+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008763-T1 ID=ATCC10864_008763-T1|Name=ATCC10864_008763-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2004bp|location=Sequence derived from alignment at MCQH01000199:1632304..1634307+ (Aspergillus niger ATCC 10864)
ATGAGTGATAATCAGTTCCCTGCTCAGCCTCTGGGCTCTTCAGAAGTCCC
CAATGAGGGTCCTCCTGTCAAGAGACCCTGCACCATCGATACGCCACCGA
TTGCGTTGACGCCAGCCGACGATGGAAGCGACTTCTACAATACACCCTTG
GCTGTCGGCACACCCGCGGACAGTAGCGCTGTGAAAGACCAGGTTGATGG
CGCTCAGAACCCGACCAGTGAGCCGGATGCCGCTGCACACGTCCATCCAC
CTATTCCAGGATTGAATTTGGTCAATGATAACGTCCAAGATCTTCAACAA
CCACAGGCAACTGAGGCTACTGTATCACAGACGACCACAAATGTGAACAG
CGAGCAAAACGGTGCTGTATCTACCAACCAGTCTGTTCCCGCCCAGGGTG
AACCCGAGAAGATGGAGGAAACTAAGGCAGAGCCCACTACCGATGCTATG
GATGTGGATGCCAATGAGAAGCAGGAGCCCCAACAACCAGCGGAGGCACC
TGCCACTAATGGCGCAGAAGCTGCTCAGGACGAAGAAGATGACGAGCACC
CCGAGTGGGAAATTGATTCATCTCCCTACGAATCCTCTTCCGACGACTCC
TCCACAGACTCTTCCGATGACAGCGACGATGACGACGAAGACTACCCCAT
CCTGAGCCCCGAAGAACAAGCACGGATTTTGATGCAGGCGGAGCTTGGCT
CTGACGACGAAGGTGATGGAAAAGGCAAGACCGGCGGCCATCTGAGGACG
GCAAACGAAATGCCCGAAGAAGCACCTCCCATCCCTGAGGTTACCATCAC
ACCGGAGATGAAAATTGTGCATCTGGGTCAGGTGGAGGCGATCGTTGAGA
ACACCCTCCTTATTACTGCCAACACCAGCGGGGAGTACCAAGTGCTCGAA
GCCGGCTCCCTACTCTGTTTGGAGAACCGCAGTGTCGCCGGTGTGGTCTC
TGAGACTCTCGGAAGGGTCGAGAACCCTCTGTATGCCGTTCGGTACCCGA
CCGCGGCTGACATCGCCGAGCGTGGCTTGTCCAAGGGCACGAATGTCTAC
TACGTCGAGGAACACTCCACCTTCGTCTTCACTCAACCTCTCAAGGGCCT
GAAGGGAAGTGATGCCTCTAACTTCCACGACGAAGAGATTGCCGAGGATG
AAGTCGAGTTCTCCGACGACGAAGCCGAAGCAGAGTATAAGCGCAAGCTT
AAACAGAAGCGCCAGGAAAAGAAGGAGTCACGGAACGAAAACGGCCCAGC
AAGAGGCAGAAGGAACCCCCCGGGACCCTCCAAGCTCGGCCAAAGCGAAT
TGAACTACGACGACAACCCCGTCGACGACGGCTACACTCCGCTCGCCCGG
CCTAAGAACCTGCACGAGATGATGCGCCAACAGGAAGCCCCCGTTGAAGC
CGACGGCCACTCCGGCCCCAGCAGAAACAACTCCGGCTTCCGCGGTGGTG
GACGCGGTCGTGGCCGAGGATATGATCGTGGAGGTCGCGGTGGTGGTGGC
CGCGGTGGCCGCCCCTCCCACGATTCGGCTCCTCATCATCAAGATCGTCA
ACAGTCATACTACCAGCCCCAAGCGCAGGCCTCTCATCAGTCTCAACCTC
AAAGCCACCCCTACCCTCAAGCAGCGTACCCCACGAACCCGCAGGGTGCA
TACGCTCTCCCTCAGCAGTTCCCTCCCTTCGCAGCTTTCCAGCCGCAACA
ACCCCAGGCATACGGACAAGGTGCCATGCCAACAGCACCTTTCAATTTCC
AGATGCCCTTCCAACAGGCCTATCAACAACCAAACCCGTACCAGCAGCTT
CCTGCTAACGTGCACATCAACCCCTTGTTCTTGGCTGCCCTTCAGCAACA
ACAGCAGCAGCAGCAACAACAACAACAAGTACCAGGACAACCCCAACAAC
CCCAGCAACCGACGATGAACTTCGACCAAGTAAAAGCACAGTTGGATCTT
CTACGGCAATTAAGTAACAACCAGAACCAGAACCAGGGGCCTCCTCGGTC
GTGA
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Coding sequence (CDS) from alignment at MCQH01000199:1632304..1634307+

>ATCC10864_008763-T1 ID=ATCC10864_008763-T1|Name=ATCC10864_008763-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2004bp|location=Sequence derived from alignment at MCQH01000199:1632304..1634307+ (Aspergillus niger ATCC 10864)
ATGAGTGATAATCAGTTCCCTGCTCAGCCTCTGGGCTCTTCAGAAGTCCC
CAATGAGGGTCCTCCTGTCAAGAGACCCTGCACCATCGATACGCCACCGA
TTGCGTTGACGCCAGCCGACGATGGAAGCGACTTCTACAATACACCCTTG
GCTGTCGGCACACCCGCGGACAGTAGCGCTGTGAAAGACCAGGTTGATGG
CGCTCAGAACCCGACCAGTGAGCCGGATGCCGCTGCACACGTCCATCCAC
CTATTCCAGGATTGAATTTGGTCAATGATAACGTCCAAGATCTTCAACAA
CCACAGGCAACTGAGGCTACTGTATCACAGACGACCACAAATGTGAACAG
CGAGCAAAACGGTGCTGTATCTACCAACCAGTCTGTTCCCGCCCAGGGTG
AACCCGAGAAGATGGAGGAAACTAAGGCAGAGCCCACTACCGATGCTATG
GATGTGGATGCCAATGAGAAGCAGGAGCCCCAACAACCAGCGGAGGCACC
TGCCACTAATGGCGCAGAAGCTGCTCAGGACGAAGAAGATGACGAGCACC
CCGAGTGGGAAATTGATTCATCTCCCTACGAATCCTCTTCCGACGACTCC
TCCACAGACTCTTCCGATGACAGCGACGATGACGACGAAGACTACCCCAT
CCTGAGCCCCGAAGAACAAGCACGGATTTTGATGCAGGCGGAGCTTGGCT
CTGACGACGAAGGTGATGGAAAAGGCAAGACCGGCGGCCATCTGAGGACG
GCAAACGAAATGCCCGAAGAAGCACCTCCCATCCCTGAGGTTACCATCAC
ACCGGAGATGAAAATTGTGCATCTGGGTCAGGTGGAGGCGATCGTTGAGA
ACACCCTCCTTATTACTGCCAACACCAGCGGGGAGTACCAAGTGCTCGAA
GCCGGCTCCCTACTCTGTTTGGAGAACCGCAGTGTCGCCGGTGTGGTCTC
TGAGACTCTCGGAAGGGTCGAGAACCCTCTGTATGCCGTTCGGTACCCGA
CCGCGGCTGACATCGCCGAGCGTGGCTTGTCCAAGGGCACGAATGTCTAC
TACGTCGAGGAACACTCCACCTTCGTCTTCACTCAACCTCTCAAGGGCCT
GAAGGGAAGTGATGCCTCTAACTTCCACGACGAAGAGATTGCCGAGGATG
AAGTCGAGTTCTCCGACGACGAAGCCGAAGCAGAGTATAAGCGCAAGCTT
AAACAGAAGCGCCAGGAAAAGAAGGAGTCACGGAACGAAAACGGCCCAGC
AAGAGGCAGAAGGAACCCCCCGGGACCCTCCAAGCTCGGCCAAAGCGAAT
TGAACTACGACGACAACCCCGTCGACGACGGCTACACTCCGCTCGCCCGG
CCTAAGAACCTGCACGAGATGATGCGCCAACAGGAAGCCCCCGTTGAAGC
CGACGGCCACTCCGGCCCCAGCAGAAACAACTCCGGCTTCCGCGGTGGTG
GACGCGGTCGTGGCCGAGGATATGATCGTGGAGGTCGCGGTGGTGGTGGC
CGCGGTGGCCGCCCCTCCCACGATTCGGCTCCTCATCATCAAGATCGTCA
ACAGTCATACTACCAGCCCCAAGCGCAGGCCTCTCATCAGTCTCAACCTC
AAAGCCACCCCTACCCTCAAGCAGCGTACCCCACGAACCCGCAGGGTGCA
TACGCTCTCCCTCAGCAGTTCCCTCCCTTCGCAGCTTTCCAGCCGCAACA
ACCCCAGGCATACGGACAAGGTGCCATGCCAACAGCACCTTTCAATTTCC
AGATGCCCTTCCAACAGGCCTATCAACAACCAAACCCGTACCAGCAGCTT
CCTGCTAACGTGCACATCAACCCCTTGTTCTTGGCTGCCCTTCAGCAACA
ACAGCAGCAGCAGCAACAACAACAACAAGTACCAGGACAACCCCAACAAC
CCCAGCAACCGACGATGAACTTCGACCAAGTAAAAGCACAGTTGGATCTT
CTACGGCAATTAAGTAACAACCAGAACCAGAACCAGGGGCCTCCTCGGTC
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005732small nucleolar ribonucleoprotein complex
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0042254ribosome biogenesis
GO:0000493box H/ACA snoRNP assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008763ATCC10864_008763Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008763-T1.exon1ATCC10864_008763-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008763-T1.cdsATCC10864_008763-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008763-T1ATCC10864_008763-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR040309
InterProIPR009000
InterProIPR007504
PFAMPF04410
InterProIPR038664
Properties
Property NameValue
NoteBUSCO:EOG09263G4R
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1632304..1634307 +
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