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ATCC10864_008774-T1, ATCC10864_008774-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008774-T1
Unique NameATCC10864_008774-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1672890..1673558-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008774-T1 ID=ATCC10864_008774-T1|Name=ATCC10864_008774-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=669bp|location=Sequence derived from alignment at MCQH01000199:1672890..1673558- (Aspergillus niger ATCC 10864)
ATGCATGAAATACACCCCCTAACGCAGGAACAGGGGGAAGACGCGGCTCG
CGAAATGGTATGCGCCGTATAGCGTAAGTGCACCCCTACTTGGATGGAAT
CGAATGACGGCTAATATTTCTGCTTTATGATAGGATGAAGAAAAAGTCAA
GCTAAAGGGCGAGGTTCGTTATATGCCCCGGACCACTACTATCTACTACT
ACGGCACCCCGCCGCGGAACGACATAATAATGTATGCTGGATAGGTACAT
CGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATT
CAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCT
GCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCGAGGCGATC
CACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCT
GGACTTGGTGTTCAATTTCTACAAAGTGAGTGATGCTAGAGGCTGGTGGA
GTGGTGCCACCGGAATTGTTTGGAATGGGAAAATAGGTAGCAGACGGATG
AGCTGATGGTTGTGCAGGTATACGCTATTCTGGACGAGGTGTTCCTTGCA
GGAGAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACA
CTTGGATAAGCTGGAATGA
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Coding sequence (CDS) from alignment at MCQH01000199:1672890..1673558-

>ATCC10864_008774-T1 ID=ATCC10864_008774-T1|Name=ATCC10864_008774-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1680bp|location=Sequence derived from alignment at MCQH01000199:1672890..1673558- (Aspergillus niger ATCC 10864)
GTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAAC
AAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAAT
GAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTC
GTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTT
GTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCG
AGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTT
TGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAA
GCTAAAGGGCGAGATGCATGAAATACACCCCCTAACGCAGGAACAGGGGG
AAGACGCGGCTCGCGAAATGGTATACGCTATTCTGGACGAGGTGTTCCTT
GCAGGAGAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGA
ACACTTGGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGCGAGATC
AGAAATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTC
TACCGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGA
CAACGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGG
ATCAGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTAC
AAAGATGAAGAAAAAGTCAAGCTAAAGGGCGAGATGCATGAAATACACCC
CCTAACGCAGGAACAGGGGGAAGACGCGGCTCGCGAAATGGTATACGCTA
TTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAG
GTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGAGTACATCG
CCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATTCA
AGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGC
GCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCGAGGCGATCCA
CTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGG
ACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGC
GAGATGCATGAAATACACCCCCTAACGCAGGAACAGGGGGAAGACGCGGC
TCGCGAAATGGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGA
TCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGAT
AAGCTGGAATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCA
GTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGAT
ATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTA
GCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTT
TGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAG
AAAAAGTCAAGCTAAAGGGCGAGATGCATGAAATACACCCCCTAACGCAG
GAACAGGGGGAAGACGCGGCTCGCGAAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030122AP-2 adaptor complex
Vocabulary: Molecular Function
TermDefinition
GO:0035615clathrin adaptor activity
Vocabulary: Biological Process
TermDefinition
GO:0072583clathrin-dependent endocytosis
GO:0015031protein transport
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
APS2ATCC10864_008774Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008774-T1ATCC10864_008774-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008774-T1.cdsATCC10864_008774-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008774-T1.exon4ATCC10864_008774-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008774-T1.exon3ATCC10864_008774-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008774-T1.exon2ATCC10864_008774-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008774-T1.exon1ATCC10864_008774-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR011012
InterProIPR022775
InterProIPR027156
InterProIPR016635
PFAMPF01217
Properties
Property NameValue
ProductAP-2 complex subunit sigma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1672890..1673558 -
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