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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000199:1743398..1744264+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_008799-T1 ID=ATCC10864_008799-T1|Name=ATCC10864_008799-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=867bp|location=Sequence derived from alignment at MCQH01000199:1743398..1744264+ (Aspergillus niger ATCC 10864)
ATGGCCGCCTCCTCATCGAAGCCATCGAGCTTCCTGCTCTAGTACGTGAT
TCAAACAGCAGCTGGAGACAGCACACCGCGACATCTATCTTCTCCCTCAA
ATAGCATCTCCAACTAACCACTCACCCATATCTACAGTTCCTGCATCGCC
CACCGCACAACCATTCTCGCCGAACACTCCTCCCCAGGCACATCCTCGAC
CGCCGCCTCGTCCCTGGCCTCTATCATCCTCCCAAAGATCAGCCACGACC
AACCGCAAAAGCTCACCTACACCCACGAGCGTCTCTTCGTACACTACATT
GCCGACTCGCCCACAACACCCAGCACCTCCGACGACCCCCGCCAGGGCGA
ACCCAACTCCTATGCGCCCCTCAGCTACATCGTCGTCGCAACCGCCGAAC
AAGGCCGCCGTATTCCTTTCGCCTTCCTCCTCGAAATCAAGCGCAAGTTC
CTCTCTACTTACTCACCCTCCAGCACGGACTTCTCTGCTCTCCCGGCTTA
CGGCTGCGCCGCGTTCAACAATGAGCTCCGCTCGCTGCTGCAAACGTACA
ATACGGCCCCGCCGGCGGATTCGCTGGCCTCGGCAAGACGGGAAATCGAT
AGCGTGCGGAACATCATGACGGAGAATATTGAGAGAGTGCTGGAGAGGGG
AGAGCGGATTGATCTCCTGGTGGACAAGACGGATCGGTTGGGTGGGAGTG
CGCATGATTTTCGCATTAGGAGTCGTGGCTTGAGGAGACGTATGTGGTGG
AAGAATATCAAGTTGATGGTTTTGTTGGCTGTTGTGGTTGTGTTCTTGGT
GTATTTGTTTGTGGGGATGGGGTGTGGGTTGCCCGCTTGGGGGAAGTGTG
TTGGGCAGAGTCAGTAA back to topCoding sequence (CDS) from alignment at MCQH01000199:1743398..1744264+ >ATCC10864_008799-T1 ID=ATCC10864_008799-T1|Name=ATCC10864_008799-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1542bp|location=Sequence derived from alignment at MCQH01000199:1743398..1744264+ (Aspergillus niger ATCC 10864)
ATGGCCGCCTCCTCATCGAAGCCATCGAGCTTCCTGCTCTATTCCTGCAT
CGCCCACCGCACAACCATTCTCGCCGAACACTCCTCCCCAGGCACATCCT
CGACCGCCGCCTCGTCCCTGGCCTCTATCATCCTCCCAAAGATCAGCCAC
GACCAACCGCAAAAGCTCACCTACACCCACGAGCGTCTCTTCGTACACTA
CATTGCCGACTCGCCCACAACACCCAGCACCTCCGACGACCCCCGCCAGG
GCGAACCCAACTCCTATGCGCCCCTCAGCTACATCGTCGTCGCAACCGCC
GAACAAGGCCGCCGTATTCCTTTCGCCTTCCTCCTCGAAATCAAGCGCAA
GTTCCTCTCTACTTACTCACCCTCCAGCACGGACTTCTCTGCTCTCCCGG
CTTACGGCTGCGCCGCGTTCAACAATGAGCTCCGCTCGCTGCTGCAAACG
TACAATACGGCCCCGCCGGCGGATTCGCTGGCCTCGGCAAGACGGGAAAT
CGATAGCGTGCGGAACATCATGACGGAGAATATTGAGAGAGTGCTGGAGA
GGGGAGAGCGGATTGATCTCCTGGTGGACAAGACGGATCGGTTGGGTGGG
AGTGCGCATGATTTTCGCATTAGGAGTCGTGGCTTGAGGAGACGTATGTG
GTGGAAGAATATCAAGTTGATGGTTTTGTTGGCTGTTGTGGTTGTGTTCT
TGGTGTATTTGTTTGTGGGGATGGGGTGTGGGTTGCCCGCTTGGGGGAAG
TGTGTTGGGCAGAGTCAGTAAATGGCCGCCTCCTCATCGAAGCCATCGAG
CTTCCTGCTCTATTCCTGCATCGCCCACCGCACAACCATTCTCGCCGAAC
ACTCCTCCCCAGGCACATCCTCGACCGCCGCCTCGTCCCTGGCCTCTATC
ATCCTCCCAAAGATCAGCCACGACCAACCGCAAAAGCTCACCTACACCCA
CGAGCGTCTCTTCGTACACTACATTGCCGACTCGCCCACAACACCCAGCA
CCTCCGACGACCCCCGCCAGGGCGAACCCAACTCCTATGCGCCCCTCAGC
TACATCGTCGTCGCAACCGCCGAACAAGGCCGCCGTATTCCTTTCGCCTT
CCTCCTCGAAATCAAGCGCAAGTTCCTCTCTACTTACTCACCCTCCAGCA
CGGACTTCTCTGCTCTCCCGGCTTACGGCTGCGCCGCGTTCAACAATGAG
CTCCGCTCGCTGCTGCAAACGTACAATACGGCCCCGCCGGCGGATTCGCT
GGCCTCGGCAAGACGGGAAATCGATAGCGTGCGGAACATCATGACGGAGA
ATATTGAGAGAGTGCTGGAGAGGGGAGAGCGGATTGATCTCCTGGTGGAC
AAGACGGATCGGTTGGGTGGGAGTGCGCATGATTTTCGCATTAGGAGTCG
TGGCTTGAGGAGACGTATGTGGTGGAAGAATATCAAGTTGATGGTTTTGT
TGGCTGTTGTGGTTGTGTTCTTGGTGTATTTGTTTGTGGGGATGGGGTGT
GGGTTGCCCGCTTGGGGGAAGTGTGTTGGGCAGAGTCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR011012 |
| PFAM | PF13774 |
| PFAM | PF00957 |
| InterPro | IPR010908 |
| InterPro | IPR042855 |
| InterPro | IPR001388 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000199 | supercontig | MCQH01000199:1743398..1744264 + |
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