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ATCC10864_008814-T1, ATCC10864_008814-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008814-T1
Unique NameATCC10864_008814-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:1789190..1791988+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008814-T1 ID=ATCC10864_008814-T1|Name=ATCC10864_008814-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2799bp|location=Sequence derived from alignment at MCQH01000199:1789190..1791988+ (Aspergillus niger ATCC 10864)
ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACAT
CACCAATGCGCTGTTTCAAAATGACAGCGACTCCGACAACGAGGCCCCCG
CGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT
TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTAT
CGCGGAGACGCAGGCGTCTGCGAACCGAAAGGCGTCGAATTTGAAGGGTC
GCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC
TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCA
GCGCAAGACGATCCCAGTGATTATGGAGGATCAGGATGTCGTGGGCATGG
CGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG
AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTC
GCCGTCGCGTGAGTTGGCGCTGCAGACTTTGAAGGTCGTGAAGGAGCTTG
GTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG
GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGAC
GCCCGGTCGGTTCCTGCACTTGAAGGTCGAAATGAACCTCGATTTGTCGA
GTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT
TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCA
GACCCTGCTTTTCTCGGCTACCCTTCCCAAATCCCTGGTGGAATTCGCGC
GCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG
ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAA
GGAGGGCGCGCTGATGTATATCCTCCACAACGTGATTAAGATGCCTACGG
GTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG
AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAA
CTTTAAGGAGTCGCCCACGAAGCATTCCACGATCATTTTCGCCGCTACCA
AGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG
ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGT
GCACAACTTCCGTACCGGCATTTCGAACATCCTGGTCGTCACTGACGTCG
CAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC
TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCG
TGCTGGCCGCACCGGTTGGAGTTACAGTCTGGTCCGCGATTCCGATGCCC
CCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC
CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGG
CTTCCCCCGCGACGGCCTGTCTCAGAGCTGCGAGTGGGTGAACAAGGTCT
TGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT
GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAA
GCGCTCGAAAGAGGTCGTTTCATCCGACAATTGGACGGCCCTGCACCCCC
TGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG
GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAA
CCGCCGCAGCGGCAAGCCCGAGAACGAGGAGGCGCTCACGACAATCAAGC
GCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA
TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGC
CGACGACGCCGAAGATGGTGCCTTCTCCGACGAAGACGAAGCCGGCGAAG
GCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC
TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGG
TGCCACCTCCTTCCAGAACCCCGAATACTTCATGTCCTACACCCCCAACA
ACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC
GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGA
TGAAGGCAGCCGCGGGTTCGGCGAGCCTCGCACCATGATGCGCTGGGACA
AGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG
GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTT
CCGCAGTGGACGCTTCGACGCCTGGAAGAAGGGCAAGCGACTGACTCGTC
TGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC
CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAA
GCGGGCTGATCCGCTCCGCGGAGATTATGATAAGATGAAGAAGAAGAATG
AGGCGGCCAAGGAGCGCCAGTTGGGTAAGTTCGGAGGAGCCGCTGCGGGC
GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTT
GAAGCAGAAGAGACGCGAGAAGAATGCTCGACCGTCGAGGAAGAAGTAG
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Coding sequence (CDS) from alignment at MCQH01000199:1789190..1791988+

>ATCC10864_008814-T1 ID=ATCC10864_008814-T1|Name=ATCC10864_008814-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2799bp|location=Sequence derived from alignment at MCQH01000199:1789190..1791988+ (Aspergillus niger ATCC 10864)
ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACAT
CACCAATGCGCTGTTTCAAAATGACAGCGACTCCGACAACGAGGCCCCCG
CGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT
TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTAT
CGCGGAGACGCAGGCGTCTGCGAACCGAAAGGCGTCGAATTTGAAGGGTC
GCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC
TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCA
GCGCAAGACGATCCCAGTGATTATGGAGGATCAGGATGTCGTGGGCATGG
CGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG
AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTC
GCCGTCGCGTGAGTTGGCGCTGCAGACTTTGAAGGTCGTGAAGGAGCTTG
GTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG
GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGAC
GCCCGGTCGGTTCCTGCACTTGAAGGTCGAAATGAACCTCGATTTGTCGA
GTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT
TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCA
GACCCTGCTTTTCTCGGCTACCCTTCCCAAATCCCTGGTGGAATTCGCGC
GCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG
ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAA
GGAGGGCGCGCTGATGTATATCCTCCACAACGTGATTAAGATGCCTACGG
GTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG
AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAA
CTTTAAGGAGTCGCCCACGAAGCATTCCACGATCATTTTCGCCGCTACCA
AGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG
ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGT
GCACAACTTCCGTACCGGCATTTCGAACATCCTGGTCGTCACTGACGTCG
CAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC
TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCG
TGCTGGCCGCACCGGTTGGAGTTACAGTCTGGTCCGCGATTCCGATGCCC
CCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC
CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGG
CTTCCCCCGCGACGGCCTGTCTCAGAGCTGCGAGTGGGTGAACAAGGTCT
TGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT
GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAA
GCGCTCGAAAGAGGTCGTTTCATCCGACAATTGGACGGCCCTGCACCCCC
TGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG
GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAA
CCGCCGCAGCGGCAAGCCCGAGAACGAGGAGGCGCTCACGACAATCAAGC
GCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA
TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGC
CGACGACGCCGAAGATGGTGCCTTCTCCGACGAAGACGAAGCCGGCGAAG
GCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC
TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGG
TGCCACCTCCTTCCAGAACCCCGAATACTTCATGTCCTACACCCCCAACA
ACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC
GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGA
TGAAGGCAGCCGCGGGTTCGGCGAGCCTCGCACCATGATGCGCTGGGACA
AGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG
GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTT
CCGCAGTGGACGCTTCGACGCCTGGAAGAAGGGCAAGCGACTGACTCGTC
TGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC
CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAA
GCGGGCTGATCCGCTCCGCGGAGATTATGATAAGATGAAGAAGAAGAATG
AGGCGGCCAAGGAGCGCCAGTTGGGTAAGTTCGGAGGAGCCGCTGCGGGC
GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTT
GAAGCAGAAGAGACGCGAGAAGAATGCTCGACCGTCGAGGAAGAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003724RNA helicase activity
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP10ATCC10864_008814Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008814-T1.exon1ATCC10864_008814-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008814-T1.cdsATCC10864_008814-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008814-T1ATCC10864_008814-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00270
InterProIPR027417
InterProIPR000629
InterProIPR012541
PFAMPF00271
PFAMPF08147
InterProIPR033517
InterProIPR014014
InterProIPR001650
InterProIPR011545
InterProIPR014001
Properties
Property NameValue
ProductATP-dependent RNA helicase dbp10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:1789190..1791988 +
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