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ATCC10864_009058-T1, ATCC10864_009058-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009058-T1
Unique NameATCC10864_009058-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:68915..70119-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009058-T1 ID=ATCC10864_009058-T1|Name=ATCC10864_009058-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1205bp|location=Sequence derived from alignment at MCQH01000208:68915..70119- (Aspergillus niger ATCC 10864)
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTGAGTATTACTCTTCA
TTTACCTGAGCTCCAGCTCCAAACATCATTGCGACAACCCCTCCTCTCTT
ATCGATAACACCGCGCAACTGCGCACAGGATGGAAGGATGGCCACACCTA
CACATACAATGCGCGCACATCCTATCTACCTCTATCCATCTATACACCTT
CCAATACATTGTCCAGAGAGAAGCTAACAAGCTATCTCCCAGGTCCTCTC
GGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCG
CGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACC
GGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCA
AGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCA
CCACACCCAATGCCTCCTCCACCTCACAACCAGATACAACAACAACGGCA
ACAGAAACAGAAGGTGGAAGCGCCATAAAACACGGCTCTCTCCGCTGCAT
GTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCG
GGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGG
AATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGA
GCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACGATCGATGCTT
CCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACA
CCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGT
TAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATA
CGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGG
CAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGT
TGACGTTGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGGAGG
ATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAA
GAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTA
TGCGCGGTTCGAGGACTTTTCAAAGACGTTGATTGCGGAGATTGAGGGGC
AATGA
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Coding sequence (CDS) from alignment at MCQH01000208:68915..70119-

>ATCC10864_009058-T1 ID=ATCC10864_009058-T1|Name=ATCC10864_009058-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1992bp|location=Sequence derived from alignment at MCQH01000208:68915..70119- (Aspergillus niger ATCC 10864)
GTCCTCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACT
CGCCCTCGCGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCG
ATCTCACCGGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAA
ATTACCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCAC
CATCATCACCACACCCAATGCCTCCTCCACCTCACAACCAGATACAACAA
CAACGGCAACAGAAACAGAAGGTGGAAGCGCCATAAAACACGGCTCTCTC
CGCTGCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAAT
CTGGCGCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATG
TGCTGTGGAATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGAACT
AGTGATGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACGAT
CGATGCTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGG
TCACTACACCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTGAAT
TTCTGCGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTC
TGGTTATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTG
GTGGGGGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAG
GTGCCCGTTGACGTTGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGG
GGAGGAGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGG
AGGAAGAAGAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGT
TGGTCGTATGCGCGGTTCGAGGACTTTTCAAAGACGTTGATTGCGGAGAT
TGAGGGGCAATGAATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTCC
TCTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCC
CTCGCGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCT
CACCGGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTA
CCCAAGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATC
ATCACCACACCCAATGCCTCCTCCACCTCACAACCAGATACAACAACAAC
GGCAACAGAAACAGAAGGTGGAAGCGCCATAAAACACGGCTCTCTCCGCT
GCATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGG
CGCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCT
GTGGAATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGAACTAGTG
ATGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACGATCGAT
GCTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCAC
TACACCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCT
GCGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGT
TATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGG
GGGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGC
CCGTTGACGTTGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAG
GAGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGA
AGAAGAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGT
CGTATGCGCGGTTCGAGGACTTTTCAAAGACGTTGATTGCGGAGATTGAG
GGGCAATGAATGCCTCTCGACGGGGTGAAGAATGTTGTGCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0005524ATP binding
GO:0016887ATPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CFD1ATCC10864_009058Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009058-T1ATCC10864_009058-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009058-T1.cdsATCC10864_009058-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009058-T1.exon2ATCC10864_009058-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009058-T1.exon1ATCC10864_009058-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR028600
InterProIPR027417
InterProIPR033756
InterProIPR019591
PFAMPF01656
Properties
Property NameValue
Productcytosolic Fe-S cluster assembly factor cfd1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:68915..70119 -
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