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ATCC10864_009072-T1, ATCC10864_009072-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009072-T1
Unique NameATCC10864_009072-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:104044..105522-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009072-T1 ID=ATCC10864_009072-T1|Name=ATCC10864_009072-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1479bp|location=Sequence derived from alignment at MCQH01000208:104044..105522- (Aspergillus niger ATCC 10864)
ATGGCTTCCAATACAATTCCTAGTCCTGCTTCGGAGACTGTTGCTCCTGG
CAAATCCGACTTTTCTCAGAAAAACAATGCCTCCCCAGCTCGTCGTTCGC
GGCCTCCAAGGCCCAATTACCGACACATCCATCGCTTCCCCTTCCCGGTC
GAGGTGCATCCTCTCCCTCCTCTCATCCCCCATAACCCTCTCTCGCTCGT
CAGTGTGCTGCTGTCCTACCTGACGTACTTTATTTCTCCCCCTCATCAGG
AAGTCTACTCCGCCTACTTTGACTCGGCCACATCCTCGGTTCATGTCACA
GACCCTAAGGCTATAAAAGCCCTCTGGGAGATGGGTTTCTTTGGTAAGGG
AACCCTGAGTCGAAGTGAGCCGAGCTGGCTTGAGCGTGAGAAGAAGAGAC
GAGGATTACTTGGGGGGATGACTAGCGAAGAGGTCACACGACAGCGGCGG
ACGGAACGTCGCGAGTTGAAACTGGAGCGCGCGAGGATGGAAAAGCTTGC
CATTGAGGAGAGACTCAAGGCCGAAGCGGCTGCCAGGGAAGGCACTGCGA
CGCCAAACGAACAGTCATCCCTCTCACCCACTCCGAATGGTGTCTCTGAA
GGCACAGTACCAATTACGGAGAAGTTCTCCCTGAGAAAAGCACGGGAAGC
CAGGGAAGCCAAGCTCCTTGAGTCACAACGTCCAGTATCACAAGACGGCA
ATACACGCACCCCTAACTCCGCCGGAAAGCGGTCACCTAGTGGCAGCAAA
ACTGTGCGGTTTTCTCCGGTTGTTCAAGCCAAGGAGTTCGCTTCTGATTC
GGCTATCTTGAGCTTGCCAGAAATGTCTGCAGATAGAAATACGGACGGAG
GTAAGGCGAATGATGAGCCAGAATTAAGTAATGAAGAGCACCTTCAATTA
TCTAACGAAGAGGCCTTCTTCCTTGCATATGGGCTGGGAGTCTTGCGTGT
GCGCGATGATACTCGCACATCCGAGATTCCTACATCTTCCCTGTTGCCAT
TATTATGTCAACACTCTTACTTCCCTCCTGGAGCTCCGTCAGCGGATCCC
ACGCCGGACGACCCATTCATGATATCCTATGTTGTGTACCACCATTTCCG
GTCTTTGGGGTGGGTTGTGCGCTCCGGAGTGAAATTCGGTGTGGACTATA
TCCTCTACAACCGTGGGCCGGTCTTCTCACATGCTGAGTTTGCTGTCGTG
GTTGTCCCGTCCTATGGTCATGGCTACTGGTCTGAAACGGCCGAGCGCAA
GGCCCAGTGTGAGGAGAAGATGGCGCGCAGTTGGTGGTGGCTGCATTGTG
TCAATCGAGTCCAGGCCCAGGTGAAGAAGAGCTTGGTAGTATGCTATGTG
GAAGTGCCTCCGCCAACGTCCTACGAGCTTGACACTCCCTCGGAAGAGGA
TATTGGTGCAATGTTGGCTCGTTATCAAGTCCGGGAGATGGTTATTCGAA
GATGGGTCCCCAATCGGACTCGGGACTAA
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Coding sequence (CDS) from alignment at MCQH01000208:104044..105522-

>ATCC10864_009072-T1 ID=ATCC10864_009072-T1|Name=ATCC10864_009072-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1479bp|location=Sequence derived from alignment at MCQH01000208:104044..105522- (Aspergillus niger ATCC 10864)
ATGGCTTCCAATACAATTCCTAGTCCTGCTTCGGAGACTGTTGCTCCTGG
CAAATCCGACTTTTCTCAGAAAAACAATGCCTCCCCAGCTCGTCGTTCGC
GGCCTCCAAGGCCCAATTACCGACACATCCATCGCTTCCCCTTCCCGGTC
GAGGTGCATCCTCTCCCTCCTCTCATCCCCCATAACCCTCTCTCGCTCGT
CAGTGTGCTGCTGTCCTACCTGACGTACTTTATTTCTCCCCCTCATCAGG
AAGTCTACTCCGCCTACTTTGACTCGGCCACATCCTCGGTTCATGTCACA
GACCCTAAGGCTATAAAAGCCCTCTGGGAGATGGGTTTCTTTGGTAAGGG
AACCCTGAGTCGAAGTGAGCCGAGCTGGCTTGAGCGTGAGAAGAAGAGAC
GAGGATTACTTGGGGGGATGACTAGCGAAGAGGTCACACGACAGCGGCGG
ACGGAACGTCGCGAGTTGAAACTGGAGCGCGCGAGGATGGAAAAGCTTGC
CATTGAGGAGAGACTCAAGGCCGAAGCGGCTGCCAGGGAAGGCACTGCGA
CGCCAAACGAACAGTCATCCCTCTCACCCACTCCGAATGGTGTCTCTGAA
GGCACAGTACCAATTACGGAGAAGTTCTCCCTGAGAAAAGCACGGGAAGC
CAGGGAAGCCAAGCTCCTTGAGTCACAACGTCCAGTATCACAAGACGGCA
ATACACGCACCCCTAACTCCGCCGGAAAGCGGTCACCTAGTGGCAGCAAA
ACTGTGCGGTTTTCTCCGGTTGTTCAAGCCAAGGAGTTCGCTTCTGATTC
GGCTATCTTGAGCTTGCCAGAAATGTCTGCAGATAGAAATACGGACGGAG
GTAAGGCGAATGATGAGCCAGAATTAAGTAATGAAGAGCACCTTCAATTA
TCTAACGAAGAGGCCTTCTTCCTTGCATATGGGCTGGGAGTCTTGCGTGT
GCGCGATGATACTCGCACATCCGAGATTCCTACATCTTCCCTGTTGCCAT
TATTATGTCAACACTCTTACTTCCCTCCTGGAGCTCCGTCAGCGGATCCC
ACGCCGGACGACCCATTCATGATATCCTATGTTGTGTACCACCATTTCCG
GTCTTTGGGGTGGGTTGTGCGCTCCGGAGTGAAATTCGGTGTGGACTATA
TCCTCTACAACCGTGGGCCGGTCTTCTCACATGCTGAGTTTGCTGTCGTG
GTTGTCCCGTCCTATGGTCATGGCTACTGGTCTGAAACGGCCGAGCGCAA
GGCCCAGTGTGAGGAGAAGATGGCGCGCAGTTGGTGGTGGCTGCATTGTG
TCAATCGAGTCCAGGCCCAGGTGAAGAAGAGCTTGGTAGTATGCTATGTG
GAAGTGCCTCCGCCAACGTCCTACGAGCTTGACACTCCCTCGGAAGAGGA
TATTGGTGCAATGTTGGCTCGTTATCAAGTCCGGGAGATGGTTATTCGAA
GATGGGTCCCCAATCGGACTCGGGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
Vocabulary: Cellular Component
TermDefinition
GO:0000214tRNA-intron endonuclease complex
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003676nucleic acid binding
GO:0000213tRNA-intron endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009072ATCC10864_009072Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009072-T1.cdsATCC10864_009072-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009072-T1.exon1ATCC10864_009072-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009072-T1ATCC10864_009072-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01974
InterProIPR036167
InterProIPR016589
InterProIPR006677
InterProIPR006676
InterProIPR011856
Properties
Property NameValue
NoteBUSCO:EOG09262WXK
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:104044..105522 -
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