You are here

ATCC10864_009123-T1, ATCC10864_009123-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009123-T1
Unique NameATCC10864_009123-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:246098..246724+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009123-T1 ID=ATCC10864_009123-T1|Name=ATCC10864_009123-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=627bp|location=Sequence derived from alignment at MCQH01000208:246098..246724+ (Aspergillus niger ATCC 10864)
ATGGCTGTGAATTTTCCATGGATCTACCCTGTTCGGGTAATCCAGGCCAT CTTCGGAATAATCGTCCTTGCTTTAACCGCATACTGTTCGTCAAGTCATT CCATCACACTTCAAAGAAGAACTGAAAATAGCTGACATATGACAAGATAT CAGTTGGTTCGCGTATAGCAGCGATTCGCCCAATTTCATGCTTTTCGTTG CGTGCTGGACAGCCTTCATCGCAACTCCCTATCTTGCCTTGGCGCCAGTA TTCTTCCCCCAGTTGGCGCATCGGATCGTCATCCCAGCTGTCGAAGTGAT TACCATGATATTCTGGTTCGCAGGATTCATCGCCCTAGCTGTATTCCTTC CACCAGCAGAAGCCTGTCACTGGAGCCGTTGCAGCGCATTACAGGCCGCA ACCGTGTTTGGTGCACTCGAGTGGTATGACTCCCCTCTGATCAAGATCGC CATTTTTAGCGCTCGAGCGGAAAAGTTCAACTCTGTATTTCGGGACATGA AGGATGTCGTTGATGAGCATTGTTACTAACATGGATTGCGTAGGGTACTA TTTCTGGTTACTTCCGTTTTTGCTGTCCTCGGCATTTCGCGTACCCGGTC CAGCTCCAGTACGAAGCCCACCCCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000208:246098..246724+

>ATCC10864_009123-T1 ID=ATCC10864_009123-T1|Name=ATCC10864_009123-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1521bp|location=Sequence derived from alignment at MCQH01000208:246098..246724+ (Aspergillus niger ATCC 10864)
ATGGCTGTGAATTTTCCATGGATCTACCCTGTTCGGGTAATCCAGGCCAT
CTTCGGAATAATCGTCCTTGCTTTAACCGCATACTATATCAGTTGGTTCG
CGTATAGCAGCGATTCGCCCAATTTCATGCTTTTCGTTGCGTGCTGGACA
GCCTTCATCGCAACTCCCTATCTTGCCTTGGCGCCAGTATTCTTCCCCCA
GTTGGCGCATCGGATCGTCATCCCAGCTGTCGAAGTGATTACCATGATAT
TCTGGTTCGCAGGATTCATCGCCCTAGCTGTATTCCTTCCACCAGCAGAA
GCCTGTCACTGGAGCCGTTGCAGCGCATTACAGGCCGCAACCGTGTTTGG
TGCACTCGAGTGGTATGACTCCCCTCTGATCAAGATCGCCATTTTTAGCG
CTCGAGCGGAAAAGTTCAACTCTGGTACTATTTCTGGTTACTTCCGTTTT
TGCTGTCCTCGGCATTTCGCGTACCCGGTCCAGCTCCAGTACGAAGCCCA
CCCCTAAATGGCTGTGAATTTTCCATGGATCTACCCTGTTCGGGTAATCC
AGGCCATCTTCGGAATAATCGTCCTTGCTTTAACCGCATACTATATCAGT
TGGTTCGCGTATAGCAGCGATTCGCCCAATTTCATGCTTTTCGTTGCGTG
CTGGACAGCCTTCATCGCAACTCCCTATCTTGCCTTGGCGCCAGTATTCT
TCCCCCAGTTGGCGCATCGGATCGTCATCCCAGCTGTCGAAGTGATTACC
ATGATATTCTGGTTCGCAGGATTCATCGCCCTAGCTGTATTCCTTCCACC
AGCAGAAGCCTGTCACTGGAGCCGTTGCAGCGCATTACAGGCCGCAACCG
TGTTTGGTGCACTCGAGTGGTATGACTCCCCTCTGATCAAGATCGCCATT
TTTAGCGCTCGAGCGGAAAAGTTCAACTCTGGTACTATTTCTGGTTACTT
CCGTTTTTGCTGTCCTCGGCATTTCGCGTACCCGGTCCAGCTCCAGTACG
AAGCCCACCCCTAAATGGCTGTGAATTTTCCATGGATCTACCCTGTTCGG
GTAATCCAGGCCATCTTCGGAATAATCGTCCTTGCTTTAACCGCATACTA
TATCAGTTGGTTCGCGTATAGCAGCGATTCGCCCAATTTCATGCTTTTCG
TTGCGTGCTGGACAGCCTTCATCGCAACTCCCTATCTTGCCTTGGCGCCA
GTATTCTTCCCCCAGTTGGCGCATCGGATCGTCATCCCAGCTGTCGAAGT
GATTACCATGATATTCTGGTTCGCAGGATTCATCGCCCTAGCTGTATTCC
TTCCACCAGCAGAAGCCTGTCACTGGAGCCGTTGCAGCGCATTACAGGCC
GCAACCGTGTTTGGTGCACTCGAGTGGTATGACTCCCCTCTGATCAAGAT
CGCCATTTTTAGCGCTCGAGCGGAAAAGTTCAACTCTGGTACTATTTCTG
GTTACTTCCGTTTTTGCTGTCCTCGGCATTTCGCGTACCCGGTCCAGCTC
CAGTACGAAGCCCACCCCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009123ATCC10864_009123Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009123-T1.exon1ATCC10864_009123-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009123-T1.exon2ATCC10864_009123-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009123-T1.exon3ATCC10864_009123-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009123-T1.cdsATCC10864_009123-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009123-T1ATCC10864_009123-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR008253
PFAMPF01284
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:246098..246724 +