You are here

Home

ATCC10864_009147-T1, ATCC10864_009147-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009147-T1
Unique NameATCC10864_009147-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:326743..327711+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009147-T1 ID=ATCC10864_009147-T1|Name=ATCC10864_009147-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=969bp|location=Sequence derived from alignment at MCQH01000208:326743..327711+ (Aspergillus niger ATCC 10864)
ATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCTCCGC
ATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTTCCGC
GGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGCAGAC
AAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCTCCTT
GAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCCAAGG
TTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAAGATG
CTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTGATCA
GGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGTATGTCAAGTG
TTGCTGTGCAATGAATGGTAACAGGATTGGATACTAATGCGGATGGGGTT
GTACACAGGCAAGCGTATTGTTCAGCTGCAGGCTTCGTTGGCTTTGGTCC
AGAGTCCTAGCAACGCTGCTAACTCTGCCACCCCCGATGCGTATGGCCGG
GTCCCCTTCACTCACCCGGCTTTAGATAGCCTGGACAACCTCGACTACAA
CACGAAGAGCTTCCTTACGAGCAAGACGAAGCTGTCGGAACTTGCTCACA
AGTATGACATGCAGAGAGTTGTGAGATGGTGCCCTCGGAAGGTGAGTCTA
CGGTTCCCGTGCATTAAGACGACATTCGGACACCCTGCGCTGCTGGGCTT
TTGATATTGTCTTGTGAGTTGGTCAATTGGATCCCCTGCTAACAGCGGCG
TGTTTACGTGTAGCCCAACAACCTCGAAAGCTCTGGAATGGACCTCGTTC
TCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCCCTGGAGAAGGGC
AATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATTAGCACCTCTGGG
ATTCAAGATCGCGGCTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000208:326743..327711+

>ATCC10864_009147-T1 ID=ATCC10864_009147-T1|Name=ATCC10864_009147-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2331bp|location=Sequence derived from alignment at MCQH01000208:326743..327711+ (Aspergillus niger ATCC 10864)
ATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCTCCGC
ATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTTCCGC
GGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGCAGAC
AAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCTCCTT
GAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCCAAGG
TTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAAGATG
CTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTGATCA
GGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGCAAGCGTATTG
TTCAGCTGCAGGCTTCGTTGGCTTTGGTCCAGAGTCCTAGCAACGCTGCT
AACTCTGCCACCCCCGATGCGTATGGCCGGGTCCCCTTCACTCACCCGGC
TTTAGATAGCCTGGACAACCTCGACTACAACACGAAGAGCTTCCTTACGA
GCAAGACGAAGCTGTCGGAACTTGCTCACAAGTATGACATGCAGAGAGTT
GTGAGATGGTGCCCTCGGAAGCCCAACAACCTCGAAAGCTCTGGAATGGA
CCTCGTTCTCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCCCTGG
AGAAGGGCAATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATTAGCA
CCTCTGGGATTCAAGATCGCGGCTTGAATGGCTTCCGTACTATCGACTCG
CGCGGTCAGGACCGCCTCCTGCTCCGCATGCCGCTCCCTCGCTCGTCCCA
ACTCCATCGCAGCCGGTCTCCTTCCGCGGCGAGGACTCTCGACGGCCACC
GAAGATGCAGCAGTCAACCATGCAGACAAGCCCCGGTGGTCGTACACGCC
GCCTCGTGCCAAAGCGCCGTTCTCCTTGAGACTCAACTCCAACCGCCCCG
AGTTCCCCGTGAATTCAGATCCCAAGGTTCTGGACCGGTTCTACATCCTC
ATGCTCGGAAACGACGGCGACAAGATGCTCTCGGAGGAAACCAAGTGGCT
CGCAGTGACACACAAGAGTTTTGATCAGGGCCGGAGAGGTTTCAACGACC
GTTTGGCCTTCCTGGGCAAGCGTATTGTTCAGCTGCAGGCTTCGTTGGCT
TTGGTCCAGAGTCCTAGCAACGCTGCTAACTCTGCCACCCCCGATGCGTA
TGGCCGGGTCCCCTTCACTCACCCGGCTTTAGATAGCCTGGACAACCTCG
ACTACAACACGAAGAGCTTCCTTACGAGCAAGACGAAGCTGTCGGAACTT
GCTCACAAGTATGACATGCAGAGAGTTGTGAGATGGTGCCCTCGGAAGCC
CAACAACCTCGAAAGCTCTGGAATGGACCTCGTTCTCGCCCACACGATGT
ACGCTGTGATCGGTGCCATCTCCCTGGAGAAGGGCAATGCTGTTGCGAAC
AAGGTGGCCCGTGAGCGCATATTAGCACCTCTGGGATTCAAGATCGCGGC
TTGAATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCT
CCGCATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTT
CCGCGGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGC
AGACAAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCT
CCTTGAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCC
AAGGTTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAA
GATGCTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTG
ATCAGGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGCAAGCGT
ATTGTTCAGCTGCAGGCTTCGTTGGCTTTGGTCCAGAGTCCTAGCAACGC
TGCTAACTCTGCCACCCCCGATGCGTATGGCCGGGTCCCCTTCACTCACC
CGGCTTTAGATAGCCTGGACAACCTCGACTACAACACGAAGAGCTTCCTT
ACGAGCAAGACGAAGCTGTCGGAACTTGCTCACAAGTATGACATGCAGAG
AGTTGTGAGATGGTGCCCTCGGAAGCCCAACAACCTCGAAAGCTCTGGAA
TGGACCTCGTTCTCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCC
CTGGAGAAGGGCAATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATT
AGCACCTCTGGGATTCAAGATCGCGGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005762mitochondrial large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0032543mitochondrial translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0004525ribonuclease III activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009147ATCC10864_009147Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009147-T1.exon1ATCC10864_009147-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009147-T1.exon2ATCC10864_009147-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009147-T1.exon3ATCC10864_009147-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009147-T1.cdsATCC10864_009147-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009147-T1ATCC10864_009147-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF14622
InterProIPR000999
InterProIPR036389
InterProIPR040030
PFAMPF00636
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:326743..327711 +
Powered by Drupal