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ATCC10864_009222-T1, ATCC10864_009222-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009222-T1
Unique NameATCC10864_009222-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:552724..553298-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009222-T1 ID=ATCC10864_009222-T1|Name=ATCC10864_009222-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=575bp|location=Sequence derived from alignment at MCQH01000208:552724..553298- (Aspergillus niger ATCC 10864)
ATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAGCAAGAACGCCCA ATCGTATGCCACCCGTTCATCTCGAGCGTCATCTCGAGATATTCATTAAA TATACTGACCCGGTCACAGCCGTTCGTCCAAGGCCGGTCTCGCCTTTCCC GTTGGACGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGT TGGTGCCGGTTAGTGATACTCGTTTTAACCCAAAAGGCAACTCTAACCTC ATGATAATAGGTGCTCCCGTTTACCTCGCTGCCGTTCTTGAGTATCTCGC CGCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCGCGATAACAAGAAGA CCCGTATCATTCCCCGTCACCTTCAGCTCGCCATCCGCAACGATGAGGAA CTGAACAAGCTCCTGGGTCATGTCACCATTGCCCAGGGTGGTGTCCTCCC CAACATCCACCAGAGTAAGTATTGGCTCCATTTGTTAATTCAGCATGTGG TACTGACAATACATAGACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAA GGGTCCGGGAAGCCAGGAGCTGTAA
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Coding sequence (CDS) from alignment at MCQH01000208:552724..553298-

>ATCC10864_009222-T1 ID=ATCC10864_009222-T1|Name=ATCC10864_009222-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1620bp|location=Sequence derived from alignment at MCQH01000208:552724..553298- (Aspergillus niger ATCC 10864)
ACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCCGGGAAGCCAG
GAGCTGTAAGTGCTCCCGTTTACCTCGCTGCCGTTCTTGAGTATCTCGCC
GCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCGCGATAACAAGAAGAC
CCGTATCATTCCCCGTCACCTTCAGCTCGCCATCCGCAACGATGAGGAAC
TGAACAAGCTCCTGGGTCATGTCACCATTGCCCAGGGTGGTGTCCTCCCC
AACATCCACCAGACCGTTCGTCCAAGGCCGGTCTCGCCTTTCCCGTTGGA
CGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGTTGGTGC
CGATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAGCAAGAACGCC
CAATCACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCCGGGAA
GCCAGGAGCTGTAAGTGCTCCCGTTTACCTCGCTGCCGTTCTTGAGTATC
TCGCCGCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCGCGATAACAAG
AAGACCCGTATCATTCCCCGTCACCTTCAGCTCGCCATCCGCAACGATGA
GGAACTGAACAAGCTCCTGGGTCATGTCACCATTGCCCAGGGTGGTGTCC
TCCCCAACATCCACCAGACCGTTCGTCCAAGGCCGGTCTCGCCTTTCCCG
TTGGACGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGTT
GGTGCCGATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAGCAAGA
ACGCCCAATCACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCC
GGGAAGCCAGGAGCTGTAAGTGCTCCCGTTTACCTCGCTGCCGTTCTTGA
GTATCTCGCCGCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCGCGATA
ACAAGAAGACCCGTATCATTCCCCGTCACCTTCAGCTCGCCATCCGCAAC
GATGAGGAACTGAACAAGCTCCTGGGTCATGTCACCATTGCCCAGGGTGG
TGTCCTCCCCAACATCCACCAGACCGTTCGTCCAAGGCCGGTCTCGCCTT
TCCCGTTGGACGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGC
GTGTTGGTGCCGATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAG
CAAGAACGCCCAATCACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAG
GGTCCGGGAAGCCAGGAGCTGTAAGTGCTCCCGTTTACCTCGCTGCCGTT
CTTGAGTATCTCGCCGCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCG
CGATAACAAGAAGACCCGTATCATTCCCCGTCACCTTCAGCTCGCCATCC
GCAACGATGAGGAACTGAACAAGCTCCTGGGTCATGTCACCATTGCCCAG
GGTGGTGTCCTCCCCAACATCCACCAGACCGTTCGTCCAAGGCCGGTCTC
GCCTTTCCCGTTGGACGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGC
TCAGCGTGTTGGTGCCGATGACTGGAGGCAAATCTGGAGGCAAGGCCAGC
GGCAGCAAGAACGCCCAATC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009222ATCC10864_009222Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009222-T1ATCC10864_009222-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009222-T1.cdsATCC10864_009222-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009222-T1.exon4ATCC10864_009222-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009222-T1.exon3ATCC10864_009222-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009222-T1.exon2ATCC10864_009222-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009222-T1.exon1ATCC10864_009222-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR032458
InterProIPR007125
PFAMPF16211
InterProIPR032454
PFAMPF00808
InterProIPR009072
PFAMPF00125
InterProIPR002119
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:552724..553298 -