You are here

Home

ATCC10864_009275-T1, ATCC10864_009275-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009275-T1
Unique NameATCC10864_009275-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000209:159192..160787-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009275-T1 ID=ATCC10864_009275-T1|Name=ATCC10864_009275-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1596bp|location=Sequence derived from alignment at MCQH01000209:159192..160787- (Aspergillus niger ATCC 10864)
ATGGTGTCTTGTCCCATCTGCAGCCAGTCCGTCTCGTCCCTAAAGATTAA
CGACCACATCGATTCCGACTGCCAGAACTTTATCGAAGAGCCGCCCAGCT
CGGGGGAGACTCCCGCCACTCAGAAAGCTCCGGTTCCCAGCTTCTTCCAG
CCAGCCTCTGCTAAGAAAGCTTCTGCCCAGTCTGCTCAGGCAAATGGACA
GCGAGATCAAAATGTGACTTCCTCCCCACTGCGCAATGTCAACGGCAAAC
GGGCGACGCCGCACGATGCCAACTCATCGGAGGTATACGAGAGATCCGGG
CCCAGCCAACCGTCGAGCGAACCAAAGAAGCCAAAAGTTAGCGCCTTGCA
AAAGGCTGCGCCTTTACCGGAACGCATGCGTCCTCGGACTCTTGACGATG
TCTGCGGACAAGAGCTTGTAGGGCCAAACGGAGTGCTTCGGGGCTTGATT
GAGCAAGATCGGGTTCCGAGTATGATTCTTTGGGGTGGTCCAGGAACAGG
AAAAACAACCATTGCTCGCGTGATTGCTTCGATGGTTGGTAGCCGCTTCG
TTGAGATCAACAGTACCAGTTCGGGAGTTGCGGAGTGCAAGAAAATCTTC
TCCGATGCGAAAAGTGAGCTCGGTCTGACGGGACGGAAGACCATCATTTT
CTGTGACGAGATTCATCGATTCTCCAAGTCTCAACAAGACGTATTTCTGG
GACCAGTAGAAAGTGGGCAGGTAACGCTTATTGGTGCTACCACGGAGAAC
CCTTCTTTCAAGGTGCAGAACGCTCTGCTGTCCCGGTGTCGGACTTTTAC
TCTTTCCAAACTTACAGACGAAGATATCAAATCGATCCTTCATCGAGCAC
TACGGCTGGAGGGGCCGAACTATTCGCCTTCGGAATTGGTCGATGAAGAA
TTGATTGATTACTTGGCCAGGTTCGCCGATGGCGACGCGCGGACGTCCCT
TAATCTTCTAGAGCTCGCCATGGATCTGTCGAAACGGCCTGGAATGACCA
AGGATGAGATCAAGCGGTCATTGACTAAGACCCTTGTCTATGATCGGGCC
GGGGATCAACACTACGATACCATTTCCGCTTTTCACAAATCCATCCGGGG
GAGCGATCCGGATGCGGCGCTTTACTATCTTGCTCGCATGATCCAGTCGG
GAGAAGACCCCCTCTATATCGCTCGACGTCTCATCGTCGTCGCTTCGGAG
GACATTGGGCTTGCGGACAACAGCATGCTCACGCTAGCCATCTCGACCCA
CGCGGCTGTGGAAAAGATCGGCCTACCGGAGGCACGGATCAATCTGGCAC
ATGCGACCGTTGCCATGGCACTCTCAAAGAAGAGCACGCGGTCGTACCGC
GGCCTGAACAATGCATTTGCTGCGCTAGCAGAGCCCGGCGTTGCTGGGCT
GCCTGTTCCGATCCATCTGCGCAATGCGCCGACTCGGTTGATGAAGGAGC
TCGGATACGGCAAGGAATACAAGTATAATCCTAACTATGTCGACGGGGAG
GTCGTCCAGGACTATCTCCCGGAAAAGATTTTGGGACGGAAGTTCTTGGA
GGATCACGATCTAGGACATCAGGTGGACCCAGATCTCATGAGGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000209:159192..160787-

>ATCC10864_009275-T1 ID=ATCC10864_009275-T1|Name=ATCC10864_009275-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1596bp|location=Sequence derived from alignment at MCQH01000209:159192..160787- (Aspergillus niger ATCC 10864)
ATGGTGTCTTGTCCCATCTGCAGCCAGTCCGTCTCGTCCCTAAAGATTAA
CGACCACATCGATTCCGACTGCCAGAACTTTATCGAAGAGCCGCCCAGCT
CGGGGGAGACTCCCGCCACTCAGAAAGCTCCGGTTCCCAGCTTCTTCCAG
CCAGCCTCTGCTAAGAAAGCTTCTGCCCAGTCTGCTCAGGCAAATGGACA
GCGAGATCAAAATGTGACTTCCTCCCCACTGCGCAATGTCAACGGCAAAC
GGGCGACGCCGCACGATGCCAACTCATCGGAGGTATACGAGAGATCCGGG
CCCAGCCAACCGTCGAGCGAACCAAAGAAGCCAAAAGTTAGCGCCTTGCA
AAAGGCTGCGCCTTTACCGGAACGCATGCGTCCTCGGACTCTTGACGATG
TCTGCGGACAAGAGCTTGTAGGGCCAAACGGAGTGCTTCGGGGCTTGATT
GAGCAAGATCGGGTTCCGAGTATGATTCTTTGGGGTGGTCCAGGAACAGG
AAAAACAACCATTGCTCGCGTGATTGCTTCGATGGTTGGTAGCCGCTTCG
TTGAGATCAACAGTACCAGTTCGGGAGTTGCGGAGTGCAAGAAAATCTTC
TCCGATGCGAAAAGTGAGCTCGGTCTGACGGGACGGAAGACCATCATTTT
CTGTGACGAGATTCATCGATTCTCCAAGTCTCAACAAGACGTATTTCTGG
GACCAGTAGAAAGTGGGCAGGTAACGCTTATTGGTGCTACCACGGAGAAC
CCTTCTTTCAAGGTGCAGAACGCTCTGCTGTCCCGGTGTCGGACTTTTAC
TCTTTCCAAACTTACAGACGAAGATATCAAATCGATCCTTCATCGAGCAC
TACGGCTGGAGGGGCCGAACTATTCGCCTTCGGAATTGGTCGATGAAGAA
TTGATTGATTACTTGGCCAGGTTCGCCGATGGCGACGCGCGGACGTCCCT
TAATCTTCTAGAGCTCGCCATGGATCTGTCGAAACGGCCTGGAATGACCA
AGGATGAGATCAAGCGGTCATTGACTAAGACCCTTGTCTATGATCGGGCC
GGGGATCAACACTACGATACCATTTCCGCTTTTCACAAATCCATCCGGGG
GAGCGATCCGGATGCGGCGCTTTACTATCTTGCTCGCATGATCCAGTCGG
GAGAAGACCCCCTCTATATCGCTCGACGTCTCATCGTCGTCGCTTCGGAG
GACATTGGGCTTGCGGACAACAGCATGCTCACGCTAGCCATCTCGACCCA
CGCGGCTGTGGAAAAGATCGGCCTACCGGAGGCACGGATCAATCTGGCAC
ATGCGACCGTTGCCATGGCACTCTCAAAGAAGAGCACGCGGTCGTACCGC
GGCCTGAACAATGCATTTGCTGCGCTAGCAGAGCCCGGCGTTGCTGGGCT
GCCTGTTCCGATCCATCTGCGCAATGCGCCGACTCGGTTGATGAAGGAGC
TCGGATACGGCAAGGAATACAAGTATAATCCTAACTATGTCGACGGGGAG
GTCGTCCAGGACTATCTCCCGGAAAAGATTTTGGGACGGAAGTTCTTGGA
GGATCACGATCTAGGACATCAGGTGGACCCAGATCTCATGAGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0016887ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009275ATCC10864_009275Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009275-T1.cdsATCC10864_009275-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009275-T1.exon1ATCC10864_009275-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009275-T1ATCC10864_009275-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00004
PFAMPF12002
InterProIPR021886
InterProIPR027417
InterProIPR032423
InterProIPR008921
PFAMPF07726
InterProIPR003959
InterProIPR006642
InterProIPR003593
PFAMPF16193
PFAMPF05496
Properties
Property NameValue
NoteBUSCO:EOG09261W2O
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000209supercontigMCQH01000209:159192..160787 -
Powered by Drupal