You are here

Home

ATCC10864_009299-T1, ATCC10864_009299-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009299-T1
Unique NameATCC10864_009299-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000209:237864..240681-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009299-T1 ID=ATCC10864_009299-T1|Name=ATCC10864_009299-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2818bp|location=Sequence derived from alignment at MCQH01000209:237864..240681- (Aspergillus niger ATCC 10864)
ATGGCGAGGGACACCGCGCAAACTCCGATCATCCCTCGTCCCCGGCTGCT
TCAGGGCGCCGCCAGTTATCCCTCCGATCTCACCGCCCCCTCGCTGTCTG
CGCCCTTCAAGCTCGACGAGGGTTATTCCGATGAAACGAGAAGCCAGCCC
GACAAGGAGTTTTTGAATTCGCCCCCCGATGATGTGATGCCGCTCCCCGA
CTGGGTTAATGCTTATAGTGAGGCCGAGCGAGCCGGTGAGTTCAGCCCCC
CTTCCCTTGGTCCCGTCCGGCGCAAGGCTCCTCTTCTGTTTGGCTTCTTT
AGCGCGATCATCATCGTACTGACAGGCTGTGGTGTTTCATGTAGAGCTCG
CCTACAAGCTTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGGTGGTT
GAAAAGCTAGCGCCTCTATTGCACATGGATCCCGTGCTGAAATTACCTCC
GGAGATCACCGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTTGGTAA
CGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACACCCGC
CTTTGGAGAGACTTATATATCAGCGAAGGCTGGCGGGTCGACATTGACGC
CGTGCATACGTACGAACAGGAACACTCGGGATTGGAATCCCCCCAGCTCC
GAAAATCTCGGTTGAGGCATATAGACCCGGATCTCGGTGAACCGAAACAG
AAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGATCACT
GGATAACAATGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGCAGCGG
CGGATATTGAAGGCGATCATCCCATGAGTGATGCGTCAAACGATCGAGGA
CCGGCGATCGCACCTGGGCAACAATCATCTAGCGCCCGCCATGAGTCGTC
AGGAACTGCCCAATCGAAGTCACATTTGCAGCAAATTTCTACGAACTCTA
GCCCCCCCAAATCGCCACTATTAATTCGAATGCCCAATGGCGCTGCAAAG
ATGAATTGGCCGCATCTGTATCGGGTACGGAGGCGGCTGGAAGAGAACTG
GGCCAAGGGCCGTTTCACGAACTTTCAACTGCCCCATCCGAATCACATGG
AAGAATCTCACCAAGAGTGTGTATATGCGATCCAGTTTACCGAGAAATGG
TTGGTCAGTGGTAGTCGGGATAAGACTGTTCGAGTATGGGACCTGGACAC
GAAGCGACTATGGCATCCGCCTCTCCAAGGCCACTCAAAATCGGTTCTCT
GTCTTCAGTTCGACCCCCGCCCATCTGAAGATATCATTGTGTCGGGAAGC
AGCGACAAGAATGTGATAATTTGGCGCTTTTCCACTGGAGAGAAGCTTCA
CGAAATTGCGCCAGCTCATGATGACTCTGTCCTGAATCTCCGATTCGACG
AACGCTATATAGTAACTTGCTCCAAGGACAAGCTTATCAAGGTCTGGAAC
AGGCGTCATCTCAGTCCGTTGGACAAGGACTACCCCTCTGTTTTTCAGGG
CTCGGGCGTCTCCTATCCGTCGTATATTGTCAACACAAGCGACGTCCCCG
CTTTCGTACTTGAAGCCGAAATCGCCAAGAATCACATCAGAACTTTAGCC
CCATACTCATTGCTAATGATCCTTGACGGACATACAGCCGCAGTGAATGC
TATTCAGCTCAACGAGGATGAGATCGTGTCCGCCTCGGGCGATCGCTTGA
TCAAGGTCTGGAATCTGCGCAACGGCGCTTGTAGAAAGACAATGATAGGC
CACGAAAAAGGCATTGCGTGCGTGCAGTTCGACAGCAAACGTATAATCAG
CGGAAGCAACGATGATACAGTTCGCATTTTCGACCACGCCTCCGGTGCCG
AAGTGGCCTGCCTGCACGGACATGCCAACCTCGTTCGGACAGTTCAAGCT
GGTTTCGGAGACCCACCGGGAGCCGAGGAGGCCTTACGACTGGAAGCTCT
GGCTGTCGACAACGAGTTCCGTGACGCCCAGCGCACCAACGCAAACGTTG
ACCTTGGCCCTAGTGCCCTTCGGCGCGCAGGATATCAGCAGAACACCAAC
GGGTCTCGGAACCCCAGAGACATCAAAGCACTGGGCGCCAAAATCCCTCC
AGGGGGAGGCGGAAGCCAATGGGGACGAATCGTCTCCGGCTCATACGACG
AGACCATCATCATCTGGAAAAAGGATAATGAAGGCCGCTGGGTTGTAGGC
CAGAGACTCCGACAGGCAGACGCCGCTGCGAATGCCTCATACAGCCACTT
AGATTCCGCTGCACGCCAGACAATCGCACGAGCCAATGCCTTTGCTCAAG
CGCACCAGGCGCAACAAGCCCAAGCTACCATGGCAGCCGCCGCGATATCA
GCAGGCGGTGGAGCACCACAGCAAGGCCAGAACCAGCAGCATCAAACACA
ACCACCACGATTGCCTACAACCAACTCCAACACCCACGACCCCTCATCAC
ATAATGCACCCTGGCCCGCGCACCTAGCCTTGAACCCGGCCCTCCTCATC
TCCAACAACCTTCCCCCCACCGTCCAGCAAAGCACATCTCAAGCTCAAGC
TCAAGCTCCAGCTCCCCCGCCCATCATGCATGCCGGCGCTCCAATGAGAC
CACCACCACTACCACCGCATGCTCAGCAACAGCAACACCCCCGAGTGAGA
GCCTTCCCTGCCGCCCCCCACCAACCACCTACCTCGAGGATCTTCAAGCT
CCAATTCGACGCGCACAAGATAATTTGCGCAAGCCAGGACCCGAGAATAG
TAGGGTGGGATTTTACTGCTGATGATGAGGAACTCAAAGAGGCGTGTCAG
TTCTTTAAGGGGCTGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000209:237864..240681-

>ATCC10864_009299-T1 ID=ATCC10864_009299-T1|Name=ATCC10864_009299-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5418bp|location=Sequence derived from alignment at MCQH01000209:237864..240681- (Aspergillus niger ATCC 10864)
AGCTCGCCTACAAGCTTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCG
GTGGTTGAAAAGCTAGCGCCTCTATTGCACATGGATCCCGTGCTGAAATT
ACCTCCGGAGATCACCGCCGAGATCTTTTCCTACCTCGACCCTCAAACGT
TGGTAACGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGAC
ACCCGCCTTTGGAGAGACTTATATATCAGCGAAGGCTGGCGGGTCGACAT
TGACGCCGTGCATACGTACGAACAGGAACACTCGGGATTGGAATCCCCCC
AGCTCCGAAAATCTCGGTTGAGGCATATAGACCCGGATCTCGGTGAACCG
AAACAGAAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGG
ATCACTGGATAACAATGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCG
CAGCGGCGGATATTGAAGGCGATCATCCCATGAGTGATGCGTCAAACGAT
CGAGGACCGGCGATCGCACCTGGGCAACAATCATCTAGCGCCCGCCATGA
GTCGTCAGGAACTGCCCAATCGAAGTCACATTTGCAGCAAATTTCTACGA
ACTCTAGCCCCCCCAAATCGCCACTATTAATTCGAATGCCCAATGGCGCT
GCAAAGATGAATTGGCCGCATCTGTATCGGGTACGGAGGCGGCTGGAAGA
GAACTGGGCCAAGGGCCGTTTCACGAACTTTCAACTGCCCCATCCGAATC
ACATGGAAGAATCTCACCAAGAGTGTGTATATGCGATCCAGTTTACCGAG
AAATGGTTGGTCAGTGGTAGTCGGGATAAGACTGTTCGAGTATGGGACCT
GGACACGAAGCGACTATGGCATCCGCCTCTCCAAGGCCACTCAAAATCGG
TTCTCTGTCTTCAGTTCGACCCCCGCCCATCTGAAGATATCATTGTGTCG
GGAAGCAGCGACAAGAATGTGATAATTTGGCGCTTTTCCACTGGAGAGAA
GCTTCACGAAATTGCGCCAGCTCATGATGACTCTGTCCTGAATCTCCGAT
TCGACGAACGCTATATAGTAACTTGCTCCAAGGACAAGCTTATCAAGGTC
TGGAACAGGCGTCATCTCAGTCCGTTGGACAAGGACTACCCCTCTGTTTT
TCAGGGCTCGGGCGTCTCCTATCCGTCGTATATTGTCAACACAAGCGACG
TCCCCGCTTTCGTACTTGAAGCCGAAATCGCCAAGAATCACATCAGAACT
TTAGCCCCATACTCATTGCTAATGATCCTTGACGGACATACAGCCGCAGT
GAATGCTATTCAGCTCAACGAGGATGAGATCGTGTCCGCCTCGGGCGATC
GCTTGATCAAGGTCTGGAATCTGCGCAACGGCGCTTGTAGAAAGACAATG
ATAGGCCACGAAAAAGGCATTGCGTGCGTGCAGTTCGACAGCAAACGTAT
AATCAGCGGAAGCAACGATGATACAGTTCGCATTTTCGACCACGCCTCCG
GTGCCGAAGTGGCCTGCCTGCACGGACATGCCAACCTCGTTCGGACAGTT
CAAGCTGGTTTCGGAGACCCACCGGGAGCCGAGGAGGCCTTACGACTGGA
AGCTCTGGCTGTCGACAACGAGTTCCGTGACGCCCAGCGCACCAACGCAA
ACGTTGACCTTGGCCCTAGTGCCCTTCGGCGCGCAGGATATCAGCAGAAC
ACCAACGGGTCTCGGAACCCCAGAGACATCAAAGCACTGGGCGCCAAAAT
CCCTCCAGGGGGAGGCGGAAGCCAATGGGGACGAATCGTCTCCGGCTCAT
ACGACGAGACCATCATCATCTGGAAAAAGGATAATGAAGGCCGCTGGGTT
GTAGGCCAGAGACTCCGACAGGCAGACGCCGCTGCGAATGCCTCATACAG
CCACTTAGATTCCGCTGCACGCCAGACAATCGCACGAGCCAATGCCTTTG
CTCAAGCGCACCAGGCGCAACAAGCCCAAGCTACCATGGCAGCCGCCGCG
ATATCAGCAGGCGGTGGAGCACCACAGCAAGGCCAGAACCAGCAGCATCA
AACACAACCACCACGATTGCCTACAACCAACTCCAACACCCACGACCCCT
CATCACATAATGCACCCTGGCCCGCGCACCTAGCCTTGAACCCGGCCCTC
CTCATCTCCAACAACCTTCCCCCCACCGTCCAGCAAAGCACATCTCAAGC
TCAAGCTCAAGCTCCAGCTCCCCCGCCCATCATGCATGCCGGCGCTCCAA
TGAGACCACCACCACTACCACCGCATGCTCAGCAACAGCAACACCCCCGA
GTGAGAGCCTTCCCTGCCGCCCCCCACCAACCACCTACCTCGAGGATCTT
CAAGCTCCAATTCGACGCGCACAAGATAATTTGCGCAAGCCAGGACCCGA
GAATAGTAGGGTGGGATTTTACTGCTGATGATGAGGAACTCAAAGAGGCG
TGTCAGTTCTTTAAGGGGCTGTGAATGGCGAGGGACACCGCGCAAACTCC
GATCATCCCTCGTCCCCGGCTGCTTCAGGGCGCCGCCAGTTATCCCTCCG
ATCTCACCGCCCCCTCGCTGTCTGCGCCCTTCAAGCTCGACGAGGGTTAT
TCCGATGAAACGAGAAGCCAGCCCGACAAGGAGTTTTTGAATTCGCCCCC
CGATGATGTGATGCCGCTCCCCGACTGGGTTAATGCTTATAGTGAGGCCG
AGCGAGCCGAGCTCGCCTACAAGCTTCTACGCACCTTGCGTGCTTCCACT
GTCGCCTCGGTGGTTGAAAAGCTAGCGCCTCTATTGCACATGGATCCCGT
GCTGAAATTACCTCCGGAGATCACCGCCGAGATCTTTTCCTACCTCGACC
CTCAAACGTTGGTAACGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGC
ATTTTTGACACCCGCCTTTGGAGAGACTTATATATCAGCGAAGGCTGGCG
GGTCGACATTGACGCCGTGCATACGTACGAACAGGAACACTCGGGATTGG
AATCCCCCCAGCTCCGAAAATCTCGGTTGAGGCATATAGACCCGGATCTC
GGTGAACCGAAACAGAAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCG
CGCAGCAGGATCACTGGATAACAATGAGGCCGTGCAAGGAAATGGGCTGC
AGCCCTCCGCAGCGGCGGATATTGAAGGCGATCATCCCATGAGTGATGCG
TCAAACGATCGAGGACCGGCGATCGCACCTGGGCAACAATCATCTAGCGC
CCGCCATGAGTCGTCAGGAACTGCCCAATCGAAGTCACATTTGCAGCAAA
TTTCTACGAACTCTAGCCCCCCCAAATCGCCACTATTAATTCGAATGCCC
AATGGCGCTGCAAAGATGAATTGGCCGCATCTGTATCGGGTACGGAGGCG
GCTGGAAGAGAACTGGGCCAAGGGCCGTTTCACGAACTTTCAACTGCCCC
ATCCGAATCACATGGAAGAATCTCACCAAGAGTGTGTATATGCGATCCAG
TTTACCGAGAAATGGTTGGTCAGTGGTAGTCGGGATAAGACTGTTCGAGT
ATGGGACCTGGACACGAAGCGACTATGGCATCCGCCTCTCCAAGGCCACT
CAAAATCGGTTCTCTGTCTTCAGTTCGACCCCCGCCCATCTGAAGATATC
ATTGTGTCGGGAAGCAGCGACAAGAATGTGATAATTTGGCGCTTTTCCAC
TGGAGAGAAGCTTCACGAAATTGCGCCAGCTCATGATGACTCTGTCCTGA
ATCTCCGATTCGACGAACGCTATATAGTAACTTGCTCCAAGGACAAGCTT
ATCAAGGTCTGGAACAGGCGTCATCTCAGTCCGTTGGACAAGGACTACCC
CTCTGTTTTTCAGGGCTCGGGCGTCTCCTATCCGTCGTATATTGTCAACA
CAAGCGACGTCCCCGCTTTCGTACTTGAAGCCGAAATCGCCAAGAATCAC
ATCAGAACTTTAGCCCCATACTCATTGCTAATGATCCTTGACGGACATAC
AGCCGCAGTGAATGCTATTCAGCTCAACGAGGATGAGATCGTGTCCGCCT
CGGGCGATCGCTTGATCAAGGTCTGGAATCTGCGCAACGGCGCTTGTAGA
AAGACAATGATAGGCCACGAAAAAGGCATTGCGTGCGTGCAGTTCGACAG
CAAACGTATAATCAGCGGAAGCAACGATGATACAGTTCGCATTTTCGACC
ACGCCTCCGGTGCCGAAGTGGCCTGCCTGCACGGACATGCCAACCTCGTT
CGGACAGTTCAAGCTGGTTTCGGAGACCCACCGGGAGCCGAGGAGGCCTT
ACGACTGGAAGCTCTGGCTGTCGACAACGAGTTCCGTGACGCCCAGCGCA
CCAACGCAAACGTTGACCTTGGCCCTAGTGCCCTTCGGCGCGCAGGATAT
CAGCAGAACACCAACGGGTCTCGGAACCCCAGAGACATCAAAGCACTGGG
CGCCAAAATCCCTCCAGGGGGAGGCGGAAGCCAATGGGGACGAATCGTCT
CCGGCTCATACGACGAGACCATCATCATCTGGAAAAAGGATAATGAAGGC
CGCTGGGTTGTAGGCCAGAGACTCCGACAGGCAGACGCCGCTGCGAATGC
CTCATACAGCCACTTAGATTCCGCTGCACGCCAGACAATCGCACGAGCCA
ATGCCTTTGCTCAAGCGCACCAGGCGCAACAAGCCCAAGCTACCATGGCA
GCCGCCGCGATATCAGCAGGCGGTGGAGCACCACAGCAAGGCCAGAACCA
GCAGCATCAAACACAACCACCACGATTGCCTACAACCAACTCCAACACCC
ACGACCCCTCATCACATAATGCACCCTGGCCCGCGCACCTAGCCTTGAAC
CCGGCCCTCCTCATCTCCAACAACCTTCCCCCCACCGTCCAGCAAAGCAC
ATCTCAAGCTCAAGCTCAAGCTCCAGCTCCCCCGCCCATCATGCATGCCG
GCGCTCCAATGAGACCACCACCACTACCACCGCATGCTCAGCAACAGCAA
CACCCCCGAGTGAGAGCCTTCCCTGCCGCCCCCCACCAACCACCTACCTC
GAGGATCTTCAAGCTCCAATTCGACGCGCACAAGATAATTTGCGCAAGCC
AGGACCCGAGAATAGTAGGGTGGGATTTTACTGCTGATGATGAGGAACTC
AAAGAGGCGTGTCAGTTCTTTAAGGGGCTGTGAATGGCGAGGGACACCGC
GCAAACTCCGATCATCCCTCGTCCCCGGCTGCTTCAGGGCGCCGCCAGTT
ATCCCTCCGATCTCACCGCCCCCTCGCTGTCTGCGCCCTTCAAGCTCGAC
GAGGGTTATTCCGATGAAACGAGAAGCCAGCCCGACAAGGAGTTTTTGAA
TTCGCCCCCCGATGATGTGATGCCGCTCCCCGACTGGGTTAATGCTTATA
GTGAGGCCGAGCGAGCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009299ATCC10864_009299Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009299-T1ATCC10864_009299-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009299-T1.cdsATCC10864_009299-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009299-T1.exon2ATCC10864_009299-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009299-T1.exon1ATCC10864_009299-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
PFAMPF00646
PFAMPF12937
InterProIPR036047
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR036322
InterProIPR020472
InterProIPR001810
PFAMPF00400
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000209supercontigMCQH01000209:237864..240681 -
Powered by Drupal