You are here

Home

ATCC10864_009346-T1, ATCC10864_009346-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009346-T1
Unique NameATCC10864_009346-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000210:65641..67041-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009346-T1 ID=ATCC10864_009346-T1|Name=ATCC10864_009346-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1401bp|location=Sequence derived from alignment at MCQH01000210:65641..67041- (Aspergillus niger ATCC 10864)
ATGAAAAACAAACCTTCAACGCAGGATGTCATTCTTCAAAAGTTATATGG
CCATACGTGCGTTATACCTGATCTACGATCGTTTATGAAGAGTGAATCGG
AGAGCATAAACAATCACCGAACCTTGTTACCGCTATGCGTTCATGACTAT
ATAGATAGGTCAGTGTCTAGCGTCCGCCACAGATAACCTGACACCCCCAG
TCAAGCTGATGCCAGTGAGTCTCTCAGCCTCTTACCAGAAGATCCAGCCA
AGGCGCAAAAAGTAAAAGGTGCCGATTTCCCACTACTAGCCTGCCTTTGG
TGGCCCCATGCATCATTCAGAAAGCTGCGTGTGTTGTCGTTTCTAGTTGT
ATGGTTGGTTGTCTGGGACGATGAACTGGACGGTGCTTCCCAGTCTACGG
CGTACAACCTGAATATGGGTCAGCAATTTCGGGATGAGACACGTCGGTTC
GTCAAAGCTAGTCTGGGATTGGAGTCGGAAGATCCCAACAACGTTACCGA
AAATGCTATCATTCGAGGGTTTAGCCAGATAGCAGATTTTATTCGAGAGG
AGTATGATGAAGGTAGGTGAGCGTGTTTGTTTAAACAAGATATACGTACG
GGGATGCTAAAGCTGCATAGAACATAGGCTTACGCTGACGGAAGAGATCA
TTTTTGTTATCCACATGTCCAAGGTGGAACAGGAAAATCGCCTTGGGATG
GACATACCTTCAACCGATCAATATCTTGCATATCGGCTTGGAACAAATTT
GATGGGCGTGATCTGCGCTGCAACAGAGTAAGCCACTATTACTGATAGGT
GGTTAATGAGAAGTTGATATATGAATCTGAAAGGCTCTCCATGGATTGGC
GAATTCCCCGTTCGATGACGCGTAGCCCATGGGTGAAGGACGTTTGGCAT
CAAACGAACCTGATAATCGCTCTGTATGTACACTCCCGATACGACCCTGA
TGCCTCCTGCTGATCAGTCAATAGTACCAATGACATCTTGTCACTCAAAA
AGGAAATTGTCAGCCTTGAGTTTACTCGTATAGAGAAAGAGACACTGACC
TAGACTTTGATTAGGATAAGGGAGAAGTATACAGCTTCATACCTGTTCTT
CTCAACCAAAACAGAACACCGCAAAATGCAGTCGATCTTTCGATCCAGAT
ACTTAAGGACTCCATTGCAGATTTGGACCGCATCAAATCTGACATTGTGG
CAAACAGTGACCAAGTCCATTCAAAGATCTTGGTCGAGTCCTGCCGCCGG
TATTGCACAGGATTTCTCGAATGGAGGTTTGTGCAACCTTGCCCAGATTG
TCAAACCCAATATAACTCTATAATACAGCCTTCTTACCTCAAGATATAAG
CTCGCCACCGTGCCCAGAGATGAGACAGGGGCCATGGTATTGTTGTTTTA
A
back to top

Coding sequence (CDS) from alignment at MCQH01000210:65641..67041-

>ATCC10864_009346-T1 ID=ATCC10864_009346-T1|Name=ATCC10864_009346-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7602bp|location=Sequence derived from alignment at MCQH01000210:65641..67041- (Aspergillus niger ATCC 10864)
CCTTCTTACCTCAAGATATAAGCTCGCCACCGTGCCCAGAGATGAGACAG
GGGCCATGGTATTGTTGTTTTAAGATAAGGGAGAAGTATACAGCTTCATA
CCTGTTCTTCTCAACCAAAACAGAACACCGCAAAATGCAGTCGATCTTTC
GATCCAGATACTTAAGGACTCCATTGCAGATTTGGACCGCATCAAATCTG
ACATTGTGGCAAACAGTGACCAAGTCCATTCAAAGATCTTGGTCGAGTCC
TGCCGCCGGTATTGCACAGGATTTCTCGAATGGAGTACCAATGACATCTT
GTCACTCAAAAAGGAAATTGCTCTCCATGGATTGGCGAATTCCCCGTTCG
ATGACGCGTAGCCCATGGGTGAAGGACGTTTGGCATCAAACGAACCTGAT
AATCGCTCTAACATAGGCTTACGCTGACGGAAGAGATCATTTTTGTTATC
CACATGTCCAAGGTGGAACAGGAAAATCGCCTTGGGATGGACATACCTTC
AACCGATCAATATCTTGCATATCGGCTTGGAACAAATTTGATGGGCGTGA
TCTGCGCTGCAACAGATCAAGCTGATGCCAGTGAGTCTCTCAGCCTCTTA
CCAGAAGATCCAGCCAAGGCGCAAAAAGTAAAAGGTGCCGATTTCCCACT
ACTAGCCTGCCTTTGGTGGCCCCATGCATCATTCAGAAAGCTGCGTGTGT
TGTCGTTTCTAGTTGTATGGTTGGTTGTCTGGGACGATGAACTGGACGGT
GCTTCCCAGTCTACGGCGTACAACCTGAATATGGGTCAGCAATTTCGGGA
TGAGACACGTCGGTTCGTCAAAGCTAGTCTGGGATTGGAGTCGGAAGATC
CCAACAACGTTACCGAAAATGCTATCATTCGAGGGTTTAGCCAGATAGCA
GATTTTATTCGAGAGGAGTATGATGAAGATGAAAAACAAACCTTCAACGC
AGGATGTCATTCTTCAAAAGTTATATGGCCATACGTGCGTTATACCTGAT
CTACGATCGTTTATGAAGAGTGAATCGGAGAGCATAAACAATCACCGAAC
CTTGTTACCGCTATGCGTTCATGACTATATAGATAGCCTTCTTACCTCAA
GATATAAGCTCGCCACCGTGCCCAGAGATGAGACAGGGGCCATGGTATTG
TTGTTTTAAGATAAGGGAGAAGTATACAGCTTCATACCTGTTCTTCTCAA
CCAAAACAGAACACCGCAAAATGCAGTCGATCTTTCGATCCAGATACTTA
AGGACTCCATTGCAGATTTGGACCGCATCAAATCTGACATTGTGGCAAAC
AGTGACCAAGTCCATTCAAAGATCTTGGTCGAGTCCTGCCGCCGGTATTG
CACAGGATTTCTCGAATGGAGTACCAATGACATCTTGTCACTCAAAAAGG
AAATTGCTCTCCATGGATTGGCGAATTCCCCGTTCGATGACGCGTAGCCC
ATGGGTGAAGGACGTTTGGCATCAAACGAACCTGATAATCGCTCTAACAT
AGGCTTACGCTGACGGAAGAGATCATTTTTGTTATCCACATGTCCAAGGT
GGAACAGGAAAATCGCCTTGGGATGGACATACCTTCAACCGATCAATATC
TTGCATATCGGCTTGGAACAAATTTGATGGGCGTGATCTGCGCTGCAACA
GATCAAGCTGATGCCAGTGAGTCTCTCAGCCTCTTACCAGAAGATCCAGC
CAAGGCGCAAAAAGTAAAAGGTGCCGATTTCCCACTACTAGCCTGCCTTT
GGTGGCCCCATGCATCATTCAGAAAGCTGCGTGTGTTGTCGTTTCTAGTT
GTATGGTTGGTTGTCTGGGACGATGAACTGGACGGTGCTTCCCAGTCTAC
GGCGTACAACCTGAATATGGGTCAGCAATTTCGGGATGAGACACGTCGGT
TCGTCAAAGCTAGTCTGGGATTGGAGTCGGAAGATCCCAACAACGTTACC
GAAAATGCTATCATTCGAGGGTTTAGCCAGATAGCAGATTTTATTCGAGA
GGAGTATGATGAAGATGAAAAACAAACCTTCAACGCAGGATGTCATTCTT
CAAAAGTTATATGGCCATACGTGCGTTATACCTGATCTACGATCGTTTAT
GAAGAGTGAATCGGAGAGCATAAACAATCACCGAACCTTGTTACCGCTAT
GCGTTCATGACTATATAGATAGCCTTCTTACCTCAAGATATAAGCTCGCC
ACCGTGCCCAGAGATGAGACAGGGGCCATGGTATTGTTGTTTTAAGATAA
GGGAGAAGTATACAGCTTCATACCTGTTCTTCTCAACCAAAACAGAACAC
CGCAAAATGCAGTCGATCTTTCGATCCAGATACTTAAGGACTCCATTGCA
GATTTGGACCGCATCAAATCTGACATTGTGGCAAACAGTGACCAAGTCCA
TTCAAAGATCTTGGTCGAGTCCTGCCGCCGGTATTGCACAGGATTTCTCG
AATGGAGTACCAATGACATCTTGTCACTCAAAAAGGAAATTGCTCTCCAT
GGATTGGCGAATTCCCCGTTCGATGACGCGTAGCCCATGGGTGAAGGACG
TTTGGCATCAAACGAACCTGATAATCGCTCTAACATAGGCTTACGCTGAC
GGAAGAGATCATTTTTGTTATCCACATGTCCAAGGTGGAACAGGAAAATC
GCCTTGGGATGGACATACCTTCAACCGATCAATATCTTGCATATCGGCTT
GGAACAAATTTGATGGGCGTGATCTGCGCTGCAACAGATCAAGCTGATGC
CAGTGAGTCTCTCAGCCTCTTACCAGAAGATCCAGCCAAGGCGCAAAAAG
TAAAAGGTGCCGATTTCCCACTACTAGCCTGCCTTTGGTGGCCCCATGCA
TCATTCAGAAAGCTGCGTGTGTTGTCGTTTCTAGTTGTATGGTTGGTTGT
CTGGGACGATGAACTGGACGGTGCTTCCCAGTCTACGGCGTACAACCTGA
ATATGGGTCAGCAATTTCGGGATGAGACACGTCGGTTCGTCAAAGCTAGT
CTGGGATTGGAGTCGGAAGATCCCAACAACGTTACCGAAAATGCTATCAT
TCGAGGGTTTAGCCAGATAGCAGATTTTATTCGAGAGGAGTATGATGAAG
ATGAAAAACAAACCTTCAACGCAGGATGTCATTCTTCAAAAGTTATATGG
CCATACGTGCGTTATACCTGATCTACGATCGTTTATGAAGAGTGAATCGG
AGAGCATAAACAATCACCGAACCTTGTTACCGCTATGCGTTCATGACTAT
ATAGATAGCCTTCTTACCTCAAGATATAAGCTCGCCACCGTGCCCAGAGA
TGAGACAGGGGCCATGGTATTGTTGTTTTAAGATAAGGGAGAAGTATACA
GCTTCATACCTGTTCTTCTCAACCAAAACAGAACACCGCAAAATGCAGTC
GATCTTTCGATCCAGATACTTAAGGACTCCATTGCAGATTTGGACCGCAT
CAAATCTGACATTGTGGCAAACAGTGACCAAGTCCATTCAAAGATCTTGG
TCGAGTCCTGCCGCCGGTATTGCACAGGATTTCTCGAATGGAGTACCAAT
GACATCTTGTCACTCAAAAAGGAAATTGCTCTCCATGGATTGGCGAATTC
CCCGTTCGATGACGCGTAGCCCATGGGTGAAGGACGTTTGGCATCAAACG
AACCTGATAATCGCTCTAACATAGGCTTACGCTGACGGAAGAGATCATTT
TTGTTATCCACATGTCCAAGGTGGAACAGGAAAATCGCCTTGGGATGGAC
ATACCTTCAACCGATCAATATCTTGCATATCGGCTTGGAACAAATTTGAT
GGGCGTGATCTGCGCTGCAACAGATCAAGCTGATGCCAGTGAGTCTCTCA
GCCTCTTACCAGAAGATCCAGCCAAGGCGCAAAAAGTAAAAGGTGCCGAT
TTCCCACTACTAGCCTGCCTTTGGTGGCCCCATGCATCATTCAGAAAGCT
GCGTGTGTTGTCGTTTCTAGTTGTATGGTTGGTTGTCTGGGACGATGAAC
TGGACGGTGCTTCCCAGTCTACGGCGTACAACCTGAATATGGGTCAGCAA
TTTCGGGATGAGACACGTCGGTTCGTCAAAGCTAGTCTGGGATTGGAGTC
GGAAGATCCCAACAACGTTACCGAAAATGCTATCATTCGAGGGTTTAGCC
AGATAGCAGATTTTATTCGAGAGGAGTATGATGAAGATGAAAAACAAACC
TTCAACGCAGGATGTCATTCTTCAAAAGTTATATGGCCATACGTGCGTTA
TACCTGATCTACGATCGTTTATGAAGAGTGAATCGGAGAGCATAAACAAT
CACCGAACCTTGTTACCGCTATGCGTTCATGACTATATAGATAGCCTTCT
TACCTCAAGATATAAGCTCGCCACCGTGCCCAGAGATGAGACAGGGGCCA
TGGTATTGTTGTTTTAAGATAAGGGAGAAGTATACAGCTTCATACCTGTT
CTTCTCAACCAAAACAGAACACCGCAAAATGCAGTCGATCTTTCGATCCA
GATACTTAAGGACTCCATTGCAGATTTGGACCGCATCAAATCTGACATTG
TGGCAAACAGTGACCAAGTCCATTCAAAGATCTTGGTCGAGTCCTGCCGC
CGGTATTGCACAGGATTTCTCGAATGGAGTACCAATGACATCTTGTCACT
CAAAAAGGAAATTGCTCTCCATGGATTGGCGAATTCCCCGTTCGATGACG
CGTAGCCCATGGGTGAAGGACGTTTGGCATCAAACGAACCTGATAATCGC
TCTAACATAGGCTTACGCTGACGGAAGAGATCATTTTTGTTATCCACATG
TCCAAGGTGGAACAGGAAAATCGCCTTGGGATGGACATACCTTCAACCGA
TCAATATCTTGCATATCGGCTTGGAACAAATTTGATGGGCGTGATCTGCG
CTGCAACAGATCAAGCTGATGCCAGTGAGTCTCTCAGCCTCTTACCAGAA
GATCCAGCCAAGGCGCAAAAAGTAAAAGGTGCCGATTTCCCACTACTAGC
CTGCCTTTGGTGGCCCCATGCATCATTCAGAAAGCTGCGTGTGTTGTCGT
TTCTAGTTGTATGGTTGGTTGTCTGGGACGATGAACTGGACGGTGCTTCC
CAGTCTACGGCGTACAACCTGAATATGGGTCAGCAATTTCGGGATGAGAC
ACGTCGGTTCGTCAAAGCTAGTCTGGGATTGGAGTCGGAAGATCCCAACA
ACGTTACCGAAAATGCTATCATTCGAGGGTTTAGCCAGATAGCAGATTTT
ATTCGAGAGGAGTATGATGAAGATGAAAAACAAACCTTCAACGCAGGATG
TCATTCTTCAAAAGTTATATGGCCATACGTGCGTTATACCTGATCTACGA
TCGTTTATGAAGAGTGAATCGGAGAGCATAAACAATCACCGAACCTTGTT
ACCGCTATGCGTTCATGACTATATAGATAGCCTTCTTACCTCAAGATATA
AGCTCGCCACCGTGCCCAGAGATGAGACAGGGGCCATGGTATTGTTGTTT
TAAGATAAGGGAGAAGTATACAGCTTCATACCTGTTCTTCTCAACCAAAA
CAGAACACCGCAAAATGCAGTCGATCTTTCGATCCAGATACTTAAGGACT
CCATTGCAGATTTGGACCGCATCAAATCTGACATTGTGGCAAACAGTGAC
CAAGTCCATTCAAAGATCTTGGTCGAGTCCTGCCGCCGGTATTGCACAGG
ATTTCTCGAATGGAGTACCAATGACATCTTGTCACTCAAAAAGGAAATTG
CTCTCCATGGATTGGCGAATTCCCCGTTCGATGACGCGTAGCCCATGGGT
GAAGGACGTTTGGCATCAAACGAACCTGATAATCGCTCTAACATAGGCTT
ACGCTGACGGAAGAGATCATTTTTGTTATCCACATGTCCAAGGTGGAACA
GGAAAATCGCCTTGGGATGGACATACCTTCAACCGATCAATATCTTGCAT
ATCGGCTTGGAACAAATTTGATGGGCGTGATCTGCGCTGCAACAGATCAA
GCTGATGCCAGTGAGTCTCTCAGCCTCTTACCAGAAGATCCAGCCAAGGC
GCAAAAAGTAAAAGGTGCCGATTTCCCACTACTAGCCTGCCTTTGGTGGC
CCCATGCATCATTCAGAAAGCTGCGTGTGTTGTCGTTTCTAGTTGTATGG
TTGGTTGTCTGGGACGATGAACTGGACGGTGCTTCCCAGTCTACGGCGTA
CAACCTGAATATGGGTCAGCAATTTCGGGATGAGACACGTCGGTTCGTCA
AAGCTAGTCTGGGATTGGAGTCGGAAGATCCCAACAACGTTACCGAAAAT
GCTATCATTCGAGGGTTTAGCCAGATAGCAGATTTTATTCGAGAGGAGTA
TGATGAAGATGAAAAACAAACCTTCAACGCAGGATGTCATTCTTCAAAAG
TTATATGGCCATACGTGCGTTATACCTGATCTACGATCGTTTATGAAGAG
TGAATCGGAGAGCATAAACAATCACCGAACCTTGTTACCGCTATGCGTTC
ATGACTATATAGATAGCCTTCTTACCTCAAGATATAAGCTCGCCACCGTG
CCCAGAGATGAGACAGGGGCCATGGTATTGTTGTTTTAAGATAAGGGAGA
AGTATACAGCTTCATACCTGTTCTTCTCAACCAAAACAGAACACCGCAAA
ATGCAGTCGATCTTTCGATCCAGATACTTAAGGACTCCATTGCAGATTTG
GACCGCATCAAATCTGACATTGTGGCAAACAGTGACCAAGTCCATTCAAA
GATCTTGGTCGAGTCCTGCCGCCGGTATTGCACAGGATTTCTCGAATGGA
GTACCAATGACATCTTGTCACTCAAAAAGGAAATTGCTCTCCATGGATTG
GCGAATTCCCCGTTCGATGACGCGTAGCCCATGGGTGAAGGACGTTTGGC
ATCAAACGAACCTGATAATCGCTCTAACATAGGCTTACGCTGACGGAAGA
GATCATTTTTGTTATCCACATGTCCAAGGTGGAACAGGAAAATCGCCTTG
GGATGGACATACCTTCAACCGATCAATATCTTGCATATCGGCTTGGAACA
AATTTGATGGGCGTGATCTGCGCTGCAACAGATCAAGCTGATGCCAGTGA
GTCTCTCAGCCTCTTACCAGAAGATCCAGCCAAGGCGCAAAAAGTAAAAG
GTGCCGATTTCCCACTACTAGCCTGCCTTTGGTGGCCCCATGCATCATTC
AGAAAGCTGCGTGTGTTGTCGTTTCTAGTTGTATGGTTGGTTGTCTGGGA
CGATGAACTGGACGGTGCTTCCCAGTCTACGGCGTACAACCTGAATATGG
GTCAGCAATTTCGGGATGAGACACGTCGGTTCGTCAAAGCTAGTCTGGGA
TTGGAGTCGGAAGATCCCAACAACGTTACCGAAAATGCTATCATTCGAGG
GTTTAGCCAGATAGCAGATTTTATTCGAGAGGAGTATGATGAAGATGAAA
AACAAACCTTCAACGCAGGATGTCATTCTTCAAAAGTTATATGGCCATAC
GTGCGTTATACCTGATCTACGATCGTTTATGAAGAGTGAATCGGAGAGCA
TAAACAATCACCGAACCTTGTTACCGCTATGCGTTCATGACTATATAGAT
AG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009346ATCC10864_009346Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009346-T1ATCC10864_009346-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009346-T1.cdsATCC10864_009346-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009346-T1.exon7ATCC10864_009346-T1.exon7Aspergillus niger ATCC 10864exon
ATCC10864_009346-T1.exon6ATCC10864_009346-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_009346-T1.exon5ATCC10864_009346-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_009346-T1.exon4ATCC10864_009346-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009346-T1.exon3ATCC10864_009346-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009346-T1.exon2ATCC10864_009346-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009346-T1.exon1ATCC10864_009346-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF19086
InterProIPR008949
InterProIPR034686
Properties
Property NameValue
NoteSMCOG1052:Terpene synthase/cyclase metal-binding domain protein
NoteantiSMASH:Cluster_1000210.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000210supercontigMCQH01000210:65641..67041 -
Powered by Drupal