You are here

Home

ATCC10864_009349-T1, ATCC10864_009349-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009349-T1
Unique NameATCC10864_009349-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000210:72806..73884+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009349-T1 ID=ATCC10864_009349-T1|Name=ATCC10864_009349-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1079bp|location=Sequence derived from alignment at MCQH01000210:72806..73884+ (Aspergillus niger ATCC 10864)
ATGACTGGCGAATACGTCAAGGATCAACCCGCTGGGTTCAGCAACCGTAT
TCAGCGCATTGCCATCGTCGGGGTAAGCCCCCTGTGCCCATCTGTGCCAT
CCACATCACTAACCACAAGTCTGATTGCCAGGCTGGGGGCACCGTCGGAA
GGCCCATCACCAAGGAACTGCTGCGGACTGGACAGCATAGCGTGACAGCC
CTGACCCGCATCGGTAGTACGAGTCAGGTGCCTGCCGGCGTCCAGTCCAT
TACCGTGGACTACGATGACGAGGCCAGTCTAGTACGCGCTCTACAGGGCC
ACGACTGCCTGATCATCAGCCTGTCAGTGCAGACCCCTCGCGATACTCAG
CCAAAGCTGCTGCAGGCTGCCTCTCAGGCTGGTATCCGGCATGTGATGCC
AAATGTCTGGGGCTGTGATGTCATGCACCCGCCGTTAGCCGACAGTGGCC
TGAACTGGGGAGGGTTCCGCGAACTCGTGGCCGGCATCGAGGCCAAGGGC
ATGGCGTGGACCGCGCTGATCTGTGGATTCTGGTATGAGCACAGCCTGGT
ACTGGGATCGAGTGCATTCGGCTTCGATCTTCCCGCCAAGAAGCTCATCC
TGAACGACGATGGCAACACCAAGATCAATATCAGCACCCTAGCCCAGTGT
GGCCGAGCCGTGTCCACCCTTCTGAGCCTTCCGGTGCTCCCGGAAGATGA
ACAAGATGACCAGCTGACCCTGAGTCGGTGGCGGAACAAGCCGGTGTATA
TTTCCAGTTTCCTGCTCAGTCAGCGAGACATGCTAGCAAGTTGGCTCCGA
GTGACGGGCGAGACGGCGGACAGTTGGACGATTGAGCAGGAATCCTCTCA
GGGTCGGTACGAGCGCGGATTGGAGTTGATGAAGAAGGGAGATCATGCAG
GATTGCTGCTGGCCATGTACTCGCGGGTCTTTTTTCCCAACGGCGATGGC
AACCACGAGCAGCGTCGGGGGCTAGACAATGACCTGCTGCGACTTCCAAC
GGAGGATTTGGATGAACACACGCGCCAGGCCAAGGCCATGTCTGACCGGG
GATACAATTATATGACAAACCGCAATTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000210:72806..73884+

>ATCC10864_009349-T1 ID=ATCC10864_009349-T1|Name=ATCC10864_009349-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2040bp|location=Sequence derived from alignment at MCQH01000210:72806..73884+ (Aspergillus niger ATCC 10864)
ATGACTGGCGAATACGTCAAGGATCAACCCGCTGGGTTCAGCAACCGTAT
TCAGCGCATTGCCATCGTCGGGGCTGGGGGCACCGTCGGAAGGCCCATCA
CCAAGGAACTGCTGCGGACTGGACAGCATAGCGTGACAGCCCTGACCCGC
ATCGGTAGTACGAGTCAGGTGCCTGCCGGCGTCCAGTCCATTACCGTGGA
CTACGATGACGAGGCCAGTCTAGTACGCGCTCTACAGGGCCACGACTGCC
TGATCATCAGCCTGTCAGTGCAGACCCCTCGCGATACTCAGCCAAAGCTG
CTGCAGGCTGCCTCTCAGGCTGGTATCCGGCATGTGATGCCAAATGTCTG
GGGCTGTGATGTCATGCACCCGCCGTTAGCCGACAGTGGCCTGAACTGGG
GAGGGTTCCGCGAACTCGTGGCCGGCATCGAGGCCAAGGGCATGGCGTGG
ACCGCGCTGATCTGTGGATTCTGGTATGAGCACAGCCTGGTACTGGGATC
GAGTGCATTCGGCTTCGATCTTCCCGCCAAGAAGCTCATCCTGAACGACG
ATGGCAACACCAAGATCAATATCAGCACCCTAGCCCAGTGTGGCCGAGCC
GTGTCCACCCTTCTGAGCCTTCCGGTGCTCCCGGAAGATGAACAAGATGA
CCAGCTGACCCTGAGTCGGTGGCGGAACAAGCCGGTGTATATTTCCAGTT
TCCTGCTCAGTCAGCGAGACATGCTAGCAAGTTGGCTCCGAGTGACGGGC
GAGACGGCGGACAGTTGGACGATTGAGCAGGAATCCTCTCAGGGTCGGTA
CGAGCGCGGATTGGAGTTGATGAAGAAGGGAGATCATGCAGGATTGCTGC
TGGCCATGTACTCGCGGGTCTTTTTTCCCAACGGCGATGGCAACCACGAG
CAGCGTCGGGGGCTAGACAATGACCTGCTGCGACTTCCAACGGAGGATTT
GGATGAACACACGCGCCAGGCCAAGGCCATGTCTGACCGGGGATACAATT
ATATGACAAACCGCAATTGAATGACTGGCGAATACGTCAAGGATCAACCC
GCTGGGTTCAGCAACCGTATTCAGCGCATTGCCATCGTCGGGGCTGGGGG
CACCGTCGGAAGGCCCATCACCAAGGAACTGCTGCGGACTGGACAGCATA
GCGTGACAGCCCTGACCCGCATCGGTAGTACGAGTCAGGTGCCTGCCGGC
GTCCAGTCCATTACCGTGGACTACGATGACGAGGCCAGTCTAGTACGCGC
TCTACAGGGCCACGACTGCCTGATCATCAGCCTGTCAGTGCAGACCCCTC
GCGATACTCAGCCAAAGCTGCTGCAGGCTGCCTCTCAGGCTGGTATCCGG
CATGTGATGCCAAATGTCTGGGGCTGTGATGTCATGCACCCGCCGTTAGC
CGACAGTGGCCTGAACTGGGGAGGGTTCCGCGAACTCGTGGCCGGCATCG
AGGCCAAGGGCATGGCGTGGACCGCGCTGATCTGTGGATTCTGGTATGAG
CACAGCCTGGTACTGGGATCGAGTGCATTCGGCTTCGATCTTCCCGCCAA
GAAGCTCATCCTGAACGACGATGGCAACACCAAGATCAATATCAGCACCC
TAGCCCAGTGTGGCCGAGCCGTGTCCACCCTTCTGAGCCTTCCGGTGCTC
CCGGAAGATGAACAAGATGACCAGCTGACCCTGAGTCGGTGGCGGAACAA
GCCGGTGTATATTTCCAGTTTCCTGCTCAGTCAGCGAGACATGCTAGCAA
GTTGGCTCCGAGTGACGGGCGAGACGGCGGACAGTTGGACGATTGAGCAG
GAATCCTCTCAGGGTCGGTACGAGCGCGGATTGGAGTTGATGAAGAAGGG
AGATCATGCAGGATTGCTGCTGGCCATGTACTCGCGGGTCTTTTTTCCCA
ACGGCGATGGCAACCACGAGCAGCGTCGGGGGCTAGACAATGACCTGCTG
CGACTTCCAACGGAGGATTTGGATGAACACACGCGCCAGGCCAAGGCCAT
GTCTGACCGGGGATACAATTATATGACAAACCGCAATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009349ATCC10864_009349Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009349-T1.exon1ATCC10864_009349-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009349-T1.exon2ATCC10864_009349-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009349-T1.cdsATCC10864_009349-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009349-T1ATCC10864_009349-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03435
InterProIPR008030
PFAMPF05368
InterProIPR036291
Properties
Property NameValue
NoteantiSMASH:Cluster_1000210.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000210supercontigMCQH01000210:72806..73884 +
Powered by Drupal