You are here

Home

ATCC10864_009402-T1, ATCC10864_009402-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009402-T1
Unique NameATCC10864_009402-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000210:217606..218693+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009402-T1 ID=ATCC10864_009402-T1|Name=ATCC10864_009402-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1088bp|location=Sequence derived from alignment at MCQH01000210:217606..218693+ (Aspergillus niger ATCC 10864)
ATGCAAGACAAAGCCAACATCCTGCTAATTGGCTGTGGTGGCATCGGCAC
TATCGCTGCGCTGAACCTGGAACTTGGAGGCAAAGCTATTGTCACTGCTG
TTCTGCGTTCAAATTACGAGCATGTCAAAGCTCACGGCTTCTCCATCAGG
TCGATCGATCACGGCGAAGTGAAGGGCTTCCGACCGTCAATCCGTATGCA
GCCAACTTTTACATCAGCAGATTCCCACTGACAGTCGCCTTGACAGTACG
AAATACCATCCCAGACGTTGAGAAAGAAAATCTCCCCCCGTACAGTTACA
TCGTCGTCACCACCAAGAACTACGCCGATGTGCCCCCGACCGTAGCAGAG
ATCATCCGCCCCGCCGTCACCCGGGGCTACACACGCATCGCTCTCGTCCA
GAATGGCCTGAACATAGAAAAGCCCCTCATTGCGGCCTTCCCAGAAAATA
TCATCCTCTCGGGCGTCAGCTTCTGTGGCTCCCATCAGGTCTCCATAGGA
GAGATCGTCCACGAAGACGATGACGAACTCTACGTGGGAGCCTTCCGCAA
TCCAAACCTGAATCCCGACGAAGAGGACGCAGCCGCCAAAGAATACTGTG
AGATCTATGGGGCAGGTGGCAAGTGCAATCCTCAGTTTAACCCCAACGTC
GGCTTCAGTCGCTGGCGGAAGCTGCTGTACAATGCCTGCTTGAACACCAT
CTGTGCCGTCACGGATCTCGACACCGGTCGGATTCAGCTGGCAGACGGCG
CCATTGAAAATCTGGTCCGACCGGCCATGGAGGAGATTCGCGCTGGTGCC
AAGGCATGTGGACATGAGTTGCCACCCGAGCTGGTGGACTTTATGATCAC
GATGGATCCCATTACCATGTACAATCCACCCAGCATGCAGGTGGACATAC
GCAATGGCCGGTTCTGTGAGTATGAGAACATTGTGGGAGAGGCATTAAAG
GAAGGCAAAGCCAGAGGGGTCCCAATGCCGACATTAACGGTATTGTATGG
CCTTCTCAAGGCCATCCAGTGGCGGACCAAGGAGAGGAAAGGGCTGGTGG
AGATTCCAGAGCCGGAGGACCACACCATCAAGAAGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000210:217606..218693+

>ATCC10864_009402-T1 ID=ATCC10864_009402-T1|Name=ATCC10864_009402-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2070bp|location=Sequence derived from alignment at MCQH01000210:217606..218693+ (Aspergillus niger ATCC 10864)
ATGCAAGACAAAGCCAACATCCTGCTAATTGGCTGTGGTGGCATCGGCAC
TATCGCTGCGCTGAACCTGGAACTTGGAGGCAAAGCTATTGTCACTGCTG
TTCTGCGTTCAAATTACGAGCATGTCAAAGCTCACGGCTTCTCCATCAGG
TCGATCGATCACGGCGAAGTGAAGGGCTTCCGACCGTCAATCCTACGAAA
TACCATCCCAGACGTTGAGAAAGAAAATCTCCCCCCGTACAGTTACATCG
TCGTCACCACCAAGAACTACGCCGATGTGCCCCCGACCGTAGCAGAGATC
ATCCGCCCCGCCGTCACCCGGGGCTACACACGCATCGCTCTCGTCCAGAA
TGGCCTGAACATAGAAAAGCCCCTCATTGCGGCCTTCCCAGAAAATATCA
TCCTCTCGGGCGTCAGCTTCTGTGGCTCCCATCAGGTCTCCATAGGAGAG
ATCGTCCACGAAGACGATGACGAACTCTACGTGGGAGCCTTCCGCAATCC
AAACCTGAATCCCGACGAAGAGGACGCAGCCGCCAAAGAATACTGTGAGA
TCTATGGGGCAGGTGGCAAGTGCAATCCTCAGTTTAACCCCAACGTCGGC
TTCAGTCGCTGGCGGAAGCTGCTGTACAATGCCTGCTTGAACACCATCTG
TGCCGTCACGGATCTCGACACCGGTCGGATTCAGCTGGCAGACGGCGCCA
TTGAAAATCTGGTCCGACCGGCCATGGAGGAGATTCGCGCTGGTGCCAAG
GCATGTGGACATGAGTTGCCACCCGAGCTGGTGGACTTTATGATCACGAT
GGATCCCATTACCATGTACAATCCACCCAGCATGCAGGTGGACATACGCA
ATGGCCGGTTCTGTGAGTATGAGAACATTGTGGGAGAGGCATTAAAGGAA
GGCAAAGCCAGAGGGGTCCCAATGCCGACATTAACGGTATTGTATGGCCT
TCTCAAGGCCATCCAGTGGCGGACCAAGGAGAGGAAAGGGCTGGTGGAGA
TTCCAGAGCCGGAGGACCACACCATCAAGAAGTGAATGCAAGACAAAGCC
AACATCCTGCTAATTGGCTGTGGTGGCATCGGCACTATCGCTGCGCTGAA
CCTGGAACTTGGAGGCAAAGCTATTGTCACTGCTGTTCTGCGTTCAAATT
ACGAGCATGTCAAAGCTCACGGCTTCTCCATCAGGTCGATCGATCACGGC
GAAGTGAAGGGCTTCCGACCGTCAATCCTACGAAATACCATCCCAGACGT
TGAGAAAGAAAATCTCCCCCCGTACAGTTACATCGTCGTCACCACCAAGA
ACTACGCCGATGTGCCCCCGACCGTAGCAGAGATCATCCGCCCCGCCGTC
ACCCGGGGCTACACACGCATCGCTCTCGTCCAGAATGGCCTGAACATAGA
AAAGCCCCTCATTGCGGCCTTCCCAGAAAATATCATCCTCTCGGGCGTCA
GCTTCTGTGGCTCCCATCAGGTCTCCATAGGAGAGATCGTCCACGAAGAC
GATGACGAACTCTACGTGGGAGCCTTCCGCAATCCAAACCTGAATCCCGA
CGAAGAGGACGCAGCCGCCAAAGAATACTGTGAGATCTATGGGGCAGGTG
GCAAGTGCAATCCTCAGTTTAACCCCAACGTCGGCTTCAGTCGCTGGCGG
AAGCTGCTGTACAATGCCTGCTTGAACACCATCTGTGCCGTCACGGATCT
CGACACCGGTCGGATTCAGCTGGCAGACGGCGCCATTGAAAATCTGGTCC
GACCGGCCATGGAGGAGATTCGCGCTGGTGCCAAGGCATGTGGACATGAG
TTGCCACCCGAGCTGGTGGACTTTATGATCACGATGGATCCCATTACCAT
GTACAATCCACCCAGCATGCAGGTGGACATACGCAATGGCCGGTTCTGTG
AGTATGAGAACATTGTGGGAGAGGCATTAAAGGAAGGCAAAGCCAGAGGG
GTCCCAATGCCGACATTAACGGTATTGTATGGCCTTCTCAAGGCCATCCA
GTGGCGGACCAAGGAGAGGAAAGGGCTGGTGGAGATTCCAGAGCCGGAGG
ACCACACCATCAAGAAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00086772-dehydropantoate 2-reductase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009402ATCC10864_009402Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009402-T1.exon1ATCC10864_009402-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009402-T1.exon2ATCC10864_009402-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009402-T1.cdsATCC10864_009402-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009402-T1ATCC10864_009402-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR008927
InterProIPR013332
PFAMPF02558
InterProIPR013752
InterProIPR003710
InterProIPR013328
PFAMPF08546
Properties
Property NameValue
NoteantiSMASH:Cluster_1000210.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000210supercontigMCQH01000210:217606..218693 +
Powered by Drupal