You are here

Home

ATCC10864_009407-T1, ATCC10864_009407-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009407-T1
Unique NameATCC10864_009407-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000210:226303..227408-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009407-T1 ID=ATCC10864_009407-T1|Name=ATCC10864_009407-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1106bp|location=Sequence derived from alignment at MCQH01000210:226303..227408- (Aspergillus niger ATCC 10864)
ATGGACAATAGCAGCACACTCCTGGCCCAACAGCTACCGCAGAAGATCGA
TATCCACCACCACTTCGTGCCCGATTTCTTTCGTCAGGGTATGTAGACAA
TTTGACATCGATCGAAAACCCCGCACTAATTCGTGTGACGCACATTCAGC
TGTCGAAGATGCAGGCGGCGACCCGACGGGCTTGCCAGTCCCCGCATGGA
CTGTCGAGGACTCTATCCAGAACATGCGGGACAATGGAGTTTGAAAAGCC
ATACTTTCTTTGACCTCTCCAGGTGCAGTTATTACAGGCAACAACGATAC
GGCGCGGTCGCTAGCTCGAAGGGTCAATGAATATGCCGCCAGCTTGCGCG
ACCAGTACCCCGACCAGCTCGGATTCTTCGCTGCGCTGCCATCTCTTCTG
GATGTACCCGGCACCCTGGCTGAAATCGAGTATTCGCTCGACACCCTTAA
AGCCGATGGGGTCACCGTGTTCACTCGCTACGGCGATGGAAACAACTACC
TAGGTCATTCTCAGTTCACTCCCATATGGAAGGAACTAGATACCCGCAAG
ACCGTGGTCCATATCCATCCTACCATGCCCGAGGACACCAATTGGATTGA
TCCTATCATGCCACCTCCAATGCTTGACTTTCCGCAGGAGACTACACGGA
CTGCCATAGACATGATTGTTAGTAATGTCACGCAGCAGTTCCCGAACTGT
CCCAAGGTCTTGTCGCACGCAGGTGGGACCTTGCCGTATCTGATCTCGAG
GGTGGCTGTGACTTCTCGGGATACGATGGCCGCAAAGGGTCCTTATGGCA
AGACCTACTTTGAGTTGATGGAGGCACTGCGCTCGTTTTATTACGATCTT
GCTCTGTCGAGTGCTCCCGCGGTCTTGAATCTTTTGCTGGATTTGATACC
GCATGACCACATTATGTATGGTGAGTGTTTCCCTCTATGGCATATAATGA
TAGCTGCTGAAGAAGTAAGTAGGATCCGATTATCCGAACGCCCCGCCAAT
TAAAGTAGCTGGTTACCGGGAGAATCTGGATGCGTTCCATATGAATGAAG
AGCTTCGGGACAAAGTTTATTTTGGGAACGCGCAGAAACTCCTATCTAGA
AACTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000210:226303..227408-

>ATCC10864_009407-T1 ID=ATCC10864_009407-T1|Name=ATCC10864_009407-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3504bp|location=Sequence derived from alignment at MCQH01000210:226303..227408- (Aspergillus niger ATCC 10864)
GATCCGATTATCCGAACGCCCCGCCAATTAAAGTAGCTGGTTACCGGGAG
AATCTGGATGCGTTCCATATGAATGAAGAGCTTCGGGACAAAGTTTATTT
TGGGAACGCGCAGAAACTCCTATCTAGAAACTGATACCCCGACCAGCTCG
GATTCTTCGCTGCGCTGCCATCTCTTCTGGATGTACCCGGCACCCTGGCT
GAAATCGAGTATTCGCTCGACACCCTTAAAGCCGATGGGGTCACCGTGTT
CACTCGCTACGGCGATGGAAACAACTACCTAGGTCATTCTCAGTTCACTC
CCATATGGAAGGAACTAGATACCCGCAAGACCGTGGTCCATATCCATCCT
ACCATGCCCGAGGACACCAATTGGATTGATCCTATCATGCCACCTCCAAT
GCTTGACTTTCCGCAGGAGACTACACGGACTGCCATAGACATGATTGTTA
GTAATGTCACGCAGCAGTTCCCGAACTGTCCCAAGGTCTTGTCGCACGCA
GGTGGGACCTTGCCGTATCTGATCTCGAGGGTGGCTGTGACTTCTCGGGA
TACGATGGCCGCAAAGGGTCCTTATGGCAAGACCTACTTTGAGTTGATGG
AGGCACTGCGCTCGTTTTATTACGATCTTGCTCTGTCGAGTGCTCCCGCG
GTCTTGAATCTTTTGCTGGATTTGATACCGCATGACCACATTATGTATGC
TGTCGAAGATGCAGGCGGCGACCCGACGGGCTTGCCAGTCCCCGCATGGA
CTGTCGAGGACTCTATCCAGAACATGCGGGACAATGGAATGGACAATAGC
AGCACACTCCTGGCCCAACAGCTACCGCAGAAGATCGATATCCACCACCA
CTTCGTGCCCGATTTCTTTCGTCAGGGATCCGATTATCCGAACGCCCCGC
CAATTAAAGTAGCTGGTTACCGGGAGAATCTGGATGCGTTCCATATGAAT
GAAGAGCTTCGGGACAAAGTTTATTTTGGGAACGCGCAGAAACTCCTATC
TAGAAACTGATACCCCGACCAGCTCGGATTCTTCGCTGCGCTGCCATCTC
TTCTGGATGTACCCGGCACCCTGGCTGAAATCGAGTATTCGCTCGACACC
CTTAAAGCCGATGGGGTCACCGTGTTCACTCGCTACGGCGATGGAAACAA
CTACCTAGGTCATTCTCAGTTCACTCCCATATGGAAGGAACTAGATACCC
GCAAGACCGTGGTCCATATCCATCCTACCATGCCCGAGGACACCAATTGG
ATTGATCCTATCATGCCACCTCCAATGCTTGACTTTCCGCAGGAGACTAC
ACGGACTGCCATAGACATGATTGTTAGTAATGTCACGCAGCAGTTCCCGA
ACTGTCCCAAGGTCTTGTCGCACGCAGGTGGGACCTTGCCGTATCTGATC
TCGAGGGTGGCTGTGACTTCTCGGGATACGATGGCCGCAAAGGGTCCTTA
TGGCAAGACCTACTTTGAGTTGATGGAGGCACTGCGCTCGTTTTATTACG
ATCTTGCTCTGTCGAGTGCTCCCGCGGTCTTGAATCTTTTGCTGGATTTG
ATACCGCATGACCACATTATGTATGCTGTCGAAGATGCAGGCGGCGACCC
GACGGGCTTGCCAGTCCCCGCATGGACTGTCGAGGACTCTATCCAGAACA
TGCGGGACAATGGAATGGACAATAGCAGCACACTCCTGGCCCAACAGCTA
CCGCAGAAGATCGATATCCACCACCACTTCGTGCCCGATTTCTTTCGTCA
GGGATCCGATTATCCGAACGCCCCGCCAATTAAAGTAGCTGGTTACCGGG
AGAATCTGGATGCGTTCCATATGAATGAAGAGCTTCGGGACAAAGTTTAT
TTTGGGAACGCGCAGAAACTCCTATCTAGAAACTGATACCCCGACCAGCT
CGGATTCTTCGCTGCGCTGCCATCTCTTCTGGATGTACCCGGCACCCTGG
CTGAAATCGAGTATTCGCTCGACACCCTTAAAGCCGATGGGGTCACCGTG
TTCACTCGCTACGGCGATGGAAACAACTACCTAGGTCATTCTCAGTTCAC
TCCCATATGGAAGGAACTAGATACCCGCAAGACCGTGGTCCATATCCATC
CTACCATGCCCGAGGACACCAATTGGATTGATCCTATCATGCCACCTCCA
ATGCTTGACTTTCCGCAGGAGACTACACGGACTGCCATAGACATGATTGT
TAGTAATGTCACGCAGCAGTTCCCGAACTGTCCCAAGGTCTTGTCGCACG
CAGGTGGGACCTTGCCGTATCTGATCTCGAGGGTGGCTGTGACTTCTCGG
GATACGATGGCCGCAAAGGGTCCTTATGGCAAGACCTACTTTGAGTTGAT
GGAGGCACTGCGCTCGTTTTATTACGATCTTGCTCTGTCGAGTGCTCCCG
CGGTCTTGAATCTTTTGCTGGATTTGATACCGCATGACCACATTATGTAT
GCTGTCGAAGATGCAGGCGGCGACCCGACGGGCTTGCCAGTCCCCGCATG
GACTGTCGAGGACTCTATCCAGAACATGCGGGACAATGGAATGGACAATA
GCAGCACACTCCTGGCCCAACAGCTACCGCAGAAGATCGATATCCACCAC
CACTTCGTGCCCGATTTCTTTCGTCAGGGATCCGATTATCCGAACGCCCC
GCCAATTAAAGTAGCTGGTTACCGGGAGAATCTGGATGCGTTCCATATGA
ATGAAGAGCTTCGGGACAAAGTTTATTTTGGGAACGCGCAGAAACTCCTA
TCTAGAAACTGATACCCCGACCAGCTCGGATTCTTCGCTGCGCTGCCATC
TCTTCTGGATGTACCCGGCACCCTGGCTGAAATCGAGTATTCGCTCGACA
CCCTTAAAGCCGATGGGGTCACCGTGTTCACTCGCTACGGCGATGGAAAC
AACTACCTAGGTCATTCTCAGTTCACTCCCATATGGAAGGAACTAGATAC
CCGCAAGACCGTGGTCCATATCCATCCTACCATGCCCGAGGACACCAATT
GGATTGATCCTATCATGCCACCTCCAATGCTTGACTTTCCGCAGGAGACT
ACACGGACTGCCATAGACATGATTGTTAGTAATGTCACGCAGCAGTTCCC
GAACTGTCCCAAGGTCTTGTCGCACGCAGGTGGGACCTTGCCGTATCTGA
TCTCGAGGGTGGCTGTGACTTCTCGGGATACGATGGCCGCAAAGGGTCCT
TATGGCAAGACCTACTTTGAGTTGATGGAGGCACTGCGCTCGTTTTATTA
CGATCTTGCTCTGTCGAGTGCTCCCGCGGTCTTGAATCTTTTGCTGGATT
TGATACCGCATGACCACATTATGTATGCTGTCGAAGATGCAGGCGGCGAC
CCGACGGGCTTGCCAGTCCCCGCATGGACTGTCGAGGACTCTATCCAGAA
CATGCGGGACAATGGAATGGACAATAGCAGCACACTCCTGGCCCAACAGC
TACCGCAGAAGATCGATATCCACCACCACTTCGTGCCCGATTTCTTTCGT
CAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016831carboxy-lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009407ATCC10864_009407Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009407-T1ATCC10864_009407-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009407-T1.cdsATCC10864_009407-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009407-T1.exon4ATCC10864_009407-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009407-T1.exon3ATCC10864_009407-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009407-T1.exon2ATCC10864_009407-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009407-T1.exon1ATCC10864_009407-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR006680
PFAMPF04909
InterProIPR032466
InterProIPR032465
Properties
Property NameValue
NoteantiSMASH:Cluster_1000210.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000210supercontigMCQH01000210:226303..227408 -
Powered by Drupal