You are here

ATCC10864_009433-T1, ATCC10864_009433-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009433-T1
Unique NameATCC10864_009433-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000210:272063..273039-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009433-T1 ID=ATCC10864_009433-T1|Name=ATCC10864_009433-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=977bp|location=Sequence derived from alignment at MCQH01000210:272063..273039- (Aspergillus niger ATCC 10864)
ATGTTTTTACTCGTGACTTCCACGACGACAACCGGGACGTTTGGCTTAAT TTACTCCATGTACACCTGCTAACTAAAACCGCAGGATTAACCTTCAACAT TACCTGTGGACTGAATTGTTCGGCTACCACATTCACCCTTCCATCCCTAT CAGCAATCCAAACTTGAGAATTGCCGACGTTGGCACCGGAACAGGGTAGG TGGAAAAGAAGGCAATATGACAAAATGGCTCGCTCACTGCCAACCCTCCA CGCAGAATTTGGTTGACAGATCTATCTCGTCGACTTCCGAGCACCGTATC CCTAGACGGCCTTGACATATCATTCAGCGCTCTTCCCCCAAAAGAATGCC TTCCTTCAAATATGACACTACATTCATACAACATACTATCCGAGACGCCT GATCATCTCCGTGGCGTCTACGATATTGTTCACGTTCGGAACTTTTCCTT CGTAGTAAGGGACTCAGAGGCTGAGAGTGTTATCGGAAACGTTTTACAAC TATTAAGTATGTATCCACTATCAATCGTTTGGGCCCACCCCAAACCTTAT ATTGCGTGCTAAGTATATCACAGAGCCGGGCGGCTACATACAATGGGCCG AAGTAGATGCCCTTTCATATCGCATTGAAAAGACCAACTCGAACTGCAAA GACAAAGCCCTTGAGGAACTCATGCGCTTAGGCAGGGCGACGGATGATCG GATCACTCCTCACTGGGTTCCTGAGATTCCTTATTTCTTTCAGCAGGCCA AGCTACAAGAGGTGCAAAATGAAGTCAAGGAGGCTCCGCCGTACATGGCC GTAGCAAAGCATGAATGCAACCTGATTGTTCCAGAAATGCTCGCCCAGAC GACGCAGGATTCGGCTCTAAGCGAGGGGCTTTCACGGCTCTTACCCGAAG TCGTGGAAGAAACTCATGGAGGGGCCTACTGGGCTTTCACTCGGCTTACA GTAGTTGGTAGGAAGCCCAGCGGTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000210:272063..273039-

>ATCC10864_009433-T1 ID=ATCC10864_009433-T1|Name=ATCC10864_009433-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3216bp|location=Sequence derived from alignment at MCQH01000210:272063..273039- (Aspergillus niger ATCC 10864)
AGCCGGGCGGCTACATACAATGGGCCGAAGTAGATGCCCTTTCATATCGC
ATTGAAAAGACCAACTCGAACTGCAAAGACAAAGCCCTTGAGGAACTCAT
GCGCTTAGGCAGGGCGACGGATGATCGGATCACTCCTCACTGGGTTCCTG
AGATTCCTTATTTCTTTCAGCAGGCCAAGCTACAAGAGGTGCAAAATGAA
GTCAAGGAGGCTCCGCCGTACATGGCCGTAGCAAAGCATGAATGCAACCT
GATTGTTCCAGAAATGCTCGCCCAGACGACGCAGGATTCGGCTCTAAGCG
AGGGGCTTTCACGGCTCTTACCCGAAGTCGTGGAAGAAACTCATGGAGGG
GCCTACTGGGCTTTCACTCGGCTTACAGTAGTTGGTAGGAAGCCCAGCGG
TTAGAATTTGGTTGACAGATCTATCTCGTCGACTTCCGAGCACCGTATCC
CTAGACGGCCTTGACATATCATTCAGCGCTCTTCCCCCAAAAGAATGCCT
TCCTTCAAATATGACACTACATTCATACAACATACTATCCGAGACGCCTG
ATCATCTCCGTGGCGTCTACGATATTGTTCACGTTCGGAACTTTTCCTTC
GTAGTAAGGGACTCAGAGGCTGAGAGTGTTATCGGAAACGTTTTACAACT
ATTAAGATTAACCTTCAACATTACCTGTGGACTGAATTGTTCGGCTACCA
CATTCACCCTTCCATCCCTATCAGCAATCCAAACTTGAGAATTGCCGACG
TTGGCACCGGAACAGGATGTTTTTACTCGTGACTTCCACGACGACAACCG
GGACAGCCGGGCGGCTACATACAATGGGCCGAAGTAGATGCCCTTTCATA
TCGCATTGAAAAGACCAACTCGAACTGCAAAGACAAAGCCCTTGAGGAAC
TCATGCGCTTAGGCAGGGCGACGGATGATCGGATCACTCCTCACTGGGTT
CCTGAGATTCCTTATTTCTTTCAGCAGGCCAAGCTACAAGAGGTGCAAAA
TGAAGTCAAGGAGGCTCCGCCGTACATGGCCGTAGCAAAGCATGAATGCA
ACCTGATTGTTCCAGAAATGCTCGCCCAGACGACGCAGGATTCGGCTCTA
AGCGAGGGGCTTTCACGGCTCTTACCCGAAGTCGTGGAAGAAACTCATGG
AGGGGCCTACTGGGCTTTCACTCGGCTTACAGTAGTTGGTAGGAAGCCCA
GCGGTTAGAATTTGGTTGACAGATCTATCTCGTCGACTTCCGAGCACCGT
ATCCCTAGACGGCCTTGACATATCATTCAGCGCTCTTCCCCCAAAAGAAT
GCCTTCCTTCAAATATGACACTACATTCATACAACATACTATCCGAGACG
CCTGATCATCTCCGTGGCGTCTACGATATTGTTCACGTTCGGAACTTTTC
CTTCGTAGTAAGGGACTCAGAGGCTGAGAGTGTTATCGGAAACGTTTTAC
AACTATTAAGATTAACCTTCAACATTACCTGTGGACTGAATTGTTCGGCT
ACCACATTCACCCTTCCATCCCTATCAGCAATCCAAACTTGAGAATTGCC
GACGTTGGCACCGGAACAGGATGTTTTTACTCGTGACTTCCACGACGACA
ACCGGGACAGCCGGGCGGCTACATACAATGGGCCGAAGTAGATGCCCTTT
CATATCGCATTGAAAAGACCAACTCGAACTGCAAAGACAAAGCCCTTGAG
GAACTCATGCGCTTAGGCAGGGCGACGGATGATCGGATCACTCCTCACTG
GGTTCCTGAGATTCCTTATTTCTTTCAGCAGGCCAAGCTACAAGAGGTGC
AAAATGAAGTCAAGGAGGCTCCGCCGTACATGGCCGTAGCAAAGCATGAA
TGCAACCTGATTGTTCCAGAAATGCTCGCCCAGACGACGCAGGATTCGGC
TCTAAGCGAGGGGCTTTCACGGCTCTTACCCGAAGTCGTGGAAGAAACTC
ATGGAGGGGCCTACTGGGCTTTCACTCGGCTTACAGTAGTTGGTAGGAAG
CCCAGCGGTTAGAATTTGGTTGACAGATCTATCTCGTCGACTTCCGAGCA
CCGTATCCCTAGACGGCCTTGACATATCATTCAGCGCTCTTCCCCCAAAA
GAATGCCTTCCTTCAAATATGACACTACATTCATACAACATACTATCCGA
GACGCCTGATCATCTCCGTGGCGTCTACGATATTGTTCACGTTCGGAACT
TTTCCTTCGTAGTAAGGGACTCAGAGGCTGAGAGTGTTATCGGAAACGTT
TTACAACTATTAAGATTAACCTTCAACATTACCTGTGGACTGAATTGTTC
GGCTACCACATTCACCCTTCCATCCCTATCAGCAATCCAAACTTGAGAAT
TGCCGACGTTGGCACCGGAACAGGATGTTTTTACTCGTGACTTCCACGAC
GACAACCGGGACAGCCGGGCGGCTACATACAATGGGCCGAAGTAGATGCC
CTTTCATATCGCATTGAAAAGACCAACTCGAACTGCAAAGACAAAGCCCT
TGAGGAACTCATGCGCTTAGGCAGGGCGACGGATGATCGGATCACTCCTC
ACTGGGTTCCTGAGATTCCTTATTTCTTTCAGCAGGCCAAGCTACAAGAG
GTGCAAAATGAAGTCAAGGAGGCTCCGCCGTACATGGCCGTAGCAAAGCA
TGAATGCAACCTGATTGTTCCAGAAATGCTCGCCCAGACGACGCAGGATT
CGGCTCTAAGCGAGGGGCTTTCACGGCTCTTACCCGAAGTCGTGGAAGAA
ACTCATGGAGGGGCCTACTGGGCTTTCACTCGGCTTACAGTAGTTGGTAG
GAAGCCCAGCGGTTAGAATTTGGTTGACAGATCTATCTCGTCGACTTCCG
AGCACCGTATCCCTAGACGGCCTTGACATATCATTCAGCGCTCTTCCCCC
AAAAGAATGCCTTCCTTCAAATATGACACTACATTCATACAACATACTAT
CCGAGACGCCTGATCATCTCCGTGGCGTCTACGATATTGTTCACGTTCGG
AACTTTTCCTTCGTAGTAAGGGACTCAGAGGCTGAGAGTGTTATCGGAAA
CGTTTTACAACTATTAAGATTAACCTTCAACATTACCTGTGGACTGAATT
GTTCGGCTACCACATTCACCCTTCCATCCCTATCAGCAATCCAAACTTGA
GAATTGCCGACGTTGGCACCGGAACAGGATGTTTTTACTCGTGACTTCCA
CGACGACAACCGGGAC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009433ATCC10864_009433Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009433-T1ATCC10864_009433-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009433-T1.cdsATCC10864_009433-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009433-T1.exon4ATCC10864_009433-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009433-T1.exon3ATCC10864_009433-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009433-T1.exon2ATCC10864_009433-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009433-T1.exon1ATCC10864_009433-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029063
PFAMPF13649
PFAMPF13489
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000210supercontigMCQH01000210:272063..273039 -