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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000215:71949..73197- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_009557-T1 ID=ATCC10864_009557-T1|Name=ATCC10864_009557-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1249bp|location=Sequence derived from alignment at MCQH01000215:71949..73197- (Aspergillus niger ATCC 10864)
ATGGGCAACGAATCTTCGACCCTGATAGACGAGAAAACCCCCCCGTCGGT
GCTGGAGGCCCGTACCATCGAGGCGATTGCCAAATATGTCAAGCAAAAAC
CGGTGAAACGCGTGGTGGTGATGGTATGGACATTTCCCTCCGATTACCCC
TCCCCCGCACCGTGTCAGATCGAATTCTACATCCTCAAAGATTGACATAG
ATGGGGATATAGCTAACAGACAATTATATGTATAGGTCGGAGCTGGTATT
AGTACCTCGGCCGGAATTCCCGATTTCCGGTCGCCAGATACCGGCATCTA
CTCGAATCTCGCCCATTTGGACCTGCCCGATCCCGAAGCCGTCTTCGACA
TCAGTTTCTTCCGTCAGAATCCCCGCCCATTCTACGCTCTGGCCCGGGAA
TTGGCCCCGGGTCAGTTCCGACCCACCATCGCACACTCGTTCATCAAGCT
GCTCTACGACAAGGGAATGCTACTGAAGCATTTCTCACAGAACATTGACT
GTCTGGAGCGGCTGGCTGGGGTACCGGGTGATAAGATCGTCGAGGCCCAT
GGAAGCTTCGCGACACAGCATTGCATCGACTGCAAGGCGGAATACCCCGA
GGACTTGATGAAAAAGGCTATCACTAAGGGAAAGGTCCCGTACTGTACTC
AGTGCAAGGGGCTGGTGAAGCCCGACATTGTCTTCTTCGGAGAGTCGCTG
CCGGCTGACTTTTTCGACAACCGGGACCTTCCCGAGCAGGCGGACTTGTG
CATTGTTATGGGAACCAGTCTACAAGTGCAGCCGTTTGCCAGTCTGCCCG
CATTCGTTAGTGATGGAGTACCCCGCGTGCTGATCAACATGGAGCGGGTG
GGCGGGCTGGGATCCCGCCCGGACGATGTACTGGTGCTGGGTGATTGCGA
CACTGGGGTGAGGCGATTGGCACGGGCGCTGGGCTGGGGGGAGGAGTTAG
AGGAGCTGTGGGAGAGGACGAACCCGGACCCGGCCGCACGGGCGGCGGAG
AATGCATCCCCACAAACCCGGGAGGAGCGGCTGCAAGATGAAGTGGACCG
GCTCACGGAGGAGGTTGATCGCACGCTGGGAATCTCGCAGGCGTACCAGC
AGCGAGTGCGGCAGCATCTGGAGCGACAGTCGGGCACGCACGCGGATGCA
GCGGGTAGGAAGGAGAAGCAAGCCGAGGAGGAGAACGACCGGATTGGGGG
ATTGGCTCATGTCTTCCCGCATCTGGCGCGAATGCAGGAAGGGAGGTGA back to topCoding sequence (CDS) from alignment at MCQH01000215:71949..73197- >ATCC10864_009557-T1 ID=ATCC10864_009557-T1|Name=ATCC10864_009557-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2274bp|location=Sequence derived from alignment at MCQH01000215:71949..73197- (Aspergillus niger ATCC 10864)
GTCGGAGCTGGTATTAGTACCTCGGCCGGAATTCCCGATTTCCGGTCGCC
AGATACCGGCATCTACTCGAATCTCGCCCATTTGGACCTGCCCGATCCCG
AAGCCGTCTTCGACATCAGTTTCTTCCGTCAGAATCCCCGCCCATTCTAC
GCTCTGGCCCGGGAATTGGCCCCGGGTCAGTTCCGACCCACCATCGCACA
CTCGTTCATCAAGCTGCTCTACGACAAGGGAATGCTACTGAAGCATTTCT
CACAGAACATTGACTGTCTGGAGCGGCTGGCTGGGGTACCGGGTGATAAG
ATCGTCGAGGCCCATGGAAGCTTCGCGACACAGCATTGCATCGACTGCAA
GGCGGAATACCCCGAGGACTTGATGAAAAAGGCTATCACTAAGGGAAAGG
TCCCGTACTGTACTCAGTGCAAGGGGCTGGTGAAGCCCGACATTGTCTTC
TTCGGAGAGTCGCTGCCGGCTGACTTTTTCGACAACCGGGACCTTCCCGA
GCAGGCGGACTTGTGCATTGTTATGGGAACCAGTCTACAAGTGCAGCCGT
TTGCCAGTCTGCCCGCATTCGTTAGTGATGGAGTACCCCGCGTGCTGATC
AACATGGAGCGGGTGGGCGGGCTGGGATCCCGCCCGGACGATGTACTGGT
GCTGGGTGATTGCGACACTGGGGTGAGGCGATTGGCACGGGCGCTGGGCT
GGGGGGAGGAGTTAGAGGAGCTGTGGGAGAGGACGAACCCGGACCCGGCC
GCACGGGCGGCGGAGAATGCATCCCCACAAACCCGGGAGGAGCGGCTGCA
AGATGAAGTGGACCGGCTCACGGAGGAGGTTGATCGCACGCTGGGAATCT
CGCAGGCGTACCAGCAGCGAGTGCGGCAGCATCTGGAGCGACAGTCGGGC
ACGCACGCGGATGCAGCGGGTAGGAAGGAGAAGCAAGCCGAGGAGGAGAA
CGACCGGATTGGGGGATTGGCTCATGTCTTCCCGCATCTGGCGCGAATGC
AGGAAGGGAGGTGAATGGGCAACGAATCTTCGACCCTGATAGACGAGAAA
ACCCCCCCGTCGGTGCTGGAGGCCCGTACCATCGAGGCGATTGCCAAATA
TGTCAAGCAAAAACCGGTGAAACGCGTGGTGGTGATGGTCGGAGCTGGTA
TTAGTACCTCGGCCGGAATTCCCGATTTCCGGTCGCCAGATACCGGCATC
TACTCGAATCTCGCCCATTTGGACCTGCCCGATCCCGAAGCCGTCTTCGA
CATCAGTTTCTTCCGTCAGAATCCCCGCCCATTCTACGCTCTGGCCCGGG
AATTGGCCCCGGGTCAGTTCCGACCCACCATCGCACACTCGTTCATCAAG
CTGCTCTACGACAAGGGAATGCTACTGAAGCATTTCTCACAGAACATTGA
CTGTCTGGAGCGGCTGGCTGGGGTACCGGGTGATAAGATCGTCGAGGCCC
ATGGAAGCTTCGCGACACAGCATTGCATCGACTGCAAGGCGGAATACCCC
GAGGACTTGATGAAAAAGGCTATCACTAAGGGAAAGGTCCCGTACTGTAC
TCAGTGCAAGGGGCTGGTGAAGCCCGACATTGTCTTCTTCGGAGAGTCGC
TGCCGGCTGACTTTTTCGACAACCGGGACCTTCCCGAGCAGGCGGACTTG
TGCATTGTTATGGGAACCAGTCTACAAGTGCAGCCGTTTGCCAGTCTGCC
CGCATTCGTTAGTGATGGAGTACCCCGCGTGCTGATCAACATGGAGCGGG
TGGGCGGGCTGGGATCCCGCCCGGACGATGTACTGGTGCTGGGTGATTGC
GACACTGGGGTGAGGCGATTGGCACGGGCGCTGGGCTGGGGGGAGGAGTT
AGAGGAGCTGTGGGAGAGGACGAACCCGGACCCGGCCGCACGGGCGGCGG
AGAATGCATCCCCACAAACCCGGGAGGAGCGGCTGCAAGATGAAGTGGAC
CGGCTCACGGAGGAGGTTGATCGCACGCTGGGAATCTCGCAGGCGTACCA
GCAGCGAGTGCGGCAGCATCTGGAGCGACAGTCGGGCACGCACGCGGATG
CAGCGGGTAGGAAGGAGAAGCAAGCCGAGGAGGAGAACGACCGGATTGGG
GGATTGGCTCATGTCTTCCCGCATCTGGCGCGAATGCAGGAAGGGAGGTG
AATGGGCAACGAATCTTCGACCCTGATAGACGAGAAAACCCCCCCGTCGG
TGCTGGAGGCCCGTACCATCGAGGCGATTGCCAAATATGTCAAGCAAAAA
CCGGTGAAACGCGTGGTGGTGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0017136 | NAD-dependent histone deacetylase activity |
| GO:0070403 | NAD+ binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR017328 |
| InterPro | IPR026590 |
| PFAM | PF02146 |
| InterPro | IPR003000 |
| InterPro | IPR029035 |
| InterPro | IPR026591 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000215 | supercontig | MCQH01000215:71949..73197 - |
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