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ATCC10864_009562-T1, ATCC10864_009562-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009562-T1
Unique NameATCC10864_009562-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000215:89346..91187+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009562-T1 ID=ATCC10864_009562-T1|Name=ATCC10864_009562-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1842bp|location=Sequence derived from alignment at MCQH01000215:89346..91187+ (Aspergillus niger ATCC 10864)
ATGTTCTACTCGGAGACCCTGTTGTCGAAGACCGGGCCACTGGCCCGCGT
CTGGTTGTCGGCCAACCTGGAGCGCAAGCTTTCCAAGTCGCACATCTTAC
AATCCGACATTGAAAGTAGTGTCAGTGCGATCGTGGACCAAGGCCAAGCC
CCCATGGCTTTGCGATTGAGCGGTCAACTGCTCCTGGGTGTGGTTCGCAT
CTACAGCCGCAAAGCGCGCTATCTGCTGGATGACTGCAATGAGGCCCTGA
TGAAGATCAAAATGGTCGGTGCTACTTGGTTCCCCCTCTCTTGCATATTC
CGGCCCCTCCGTCGCTGACTACTCTTCCTCACATAGGCCTTTCGTTTGAC
GAACAACAATGACTTGACCACTACGGTCGTTGCCCCTGGCGGCATCACTT
TGCCCGATGTACTGACGGAATCCGACTTGTTTATGAATCTGGATTCCTCC
CTTCTGTTGCCGCAAACCCTCAACCTCGAGCCCGAGGGTAAGCGGCCTGG
TTCTTCGATGGATTTCGGTAGTCAGCTGCTCCCCGATACTGGCTTGCGCC
GCTCCGCATCGCAAGAACCTGCGCGCCTCGAGGATCACACCCTGGTCGAC
TTGGATTTGGGAGAAGATGAAACACCTCTCGGCCATGACTTCAGCATGGA
AGTCGGTCGAGATGCCCCGGCTCCCCGCCCCGTGGAGGAAGATCTTTTCA
GCGATGGGGGCAAATTCAACGATGTCGACAACCTGCAACTGGACCTTGGT
GAAGATGATGCTCCCCTGGATAAGATGGATCTGGGCGACGACGCTCTACC
CGATAACCTTCTGCAAACGGATGACGCCATGGACCTCGGCGATGATCATG
ACGAGCCTGCCCCCAATGCCGACGATGAGCTGGAACGCGAGAGTGCCCTG
AGCTCCATGGCGGACGATGATCTAGACGACCTTGAAAAGTCTCAAGCGTT
CGAATTAGACGTGAATGACGTGAATGACGAAGATGATGAGGTTACTGCCA
AGCATGCTCAACCGCCAAAGCGCCGCAAGGTCGTTCTCATGGCACTGGAC
AAGGAGACCGACCAAAAGGTCAAGGATGTCAGAGAACAATACTTGACGCG
CGAGGAGATCATGAAGCCCTCTTCATGGCTGCCCCGGGACCCCGTGCTGC
TGACCCTGATGAACATGCAGAAGAACGGAGACTTTGTATCGAATGTGCTC
GGTGCGGGCCGAGGACGTGGCTGGGCTCCCGAATTGCGTGACTTGCTTTC
CTTCGATACCATCCGGAAGGCGGGCGAGCTGAAGCGGAAGCGCGACAGTG
GAATCGCCGATATGGATGTGGATGCGGCCACTGCGCCGGCCCTGGAGCTA
GGCGAAGAAGAGGCCATTGTGCCGGTCGATGAGGGAGTTGGTCTTGACTC
GACTCTGCTCCAACGCTCCGAAATCGAGTTCCCCGGTGACGAGGAGGACC
AGGCTCTGCGTCTGAGTGACGACGAAGGAATGAACCAACCATTGGAGGAT
GCCGACGACACGATCGTGGCCGACAGTGGTCCCGTGTCGATCGGTACGAA
GCACGCCGTCCACATCCTTCGGGAGCGCCTGGGTGAATCTGCGGCCGAGC
AGAAGAAGAGCGTGAAGTTCCAGGATTTGCTTCCGGAGAAGAAGGCATCC
AAGGCGGACGCCACCAAGATGTTCTTCGAGGTCCTCGTGCTGGCCACCAA
GGACGCTGTACAAGTTGAACAACGACCGGAGACCGTGGGTGGACCTCTCA
AGATCCGTGGCAAACGAGCCCTCTGGGGCTCGTGGGCTGAGGAAGGGGCC
AGCGGGGAGGCAGAGCAGCAGCCCGTTGAGGCCACCGCCTAA
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Coding sequence (CDS) from alignment at MCQH01000215:89346..91187+

>ATCC10864_009562-T1 ID=ATCC10864_009562-T1|Name=ATCC10864_009562-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3540bp|location=Sequence derived from alignment at MCQH01000215:89346..91187+ (Aspergillus niger ATCC 10864)
ATGTTCTACTCGGAGACCCTGTTGTCGAAGACCGGGCCACTGGCCCGCGT
CTGGTTGTCGGCCAACCTGGAGCGCAAGCTTTCCAAGTCGCACATCTTAC
AATCCGACATTGAAAGTAGTGTCAGTGCGATCGTGGACCAAGGCCAAGCC
CCCATGGCTTTGCGATTGAGCGGTCAACTGCTCCTGGGTGTGGTTCGCAT
CTACAGCCGCAAAGCGCGCTATCTGCTGGATGACTGCAATGAGGCCCTGA
TGAAGATCAAAATGGCCTTTCGTTTGACGAACAACAATGACTTGACCACT
ACGGTCGTTGCCCCTGGCGGCATCACTTTGCCCGATGTACTGACGGAATC
CGACTTGTTTATGAATCTGGATTCCTCCCTTCTGTTGCCGCAAACCCTCA
ACCTCGAGCCCGAGGGTAAGCGGCCTGGTTCTTCGATGGATTTCGGTAGT
CAGCTGCTCCCCGATACTGGCTTGCGCCGCTCCGCATCGCAAGAACCTGC
GCGCCTCGAGGATCACACCCTGGTCGACTTGGATTTGGGAGAAGATGAAA
CACCTCTCGGCCATGACTTCAGCATGGAAGTCGGTCGAGATGCCCCGGCT
CCCCGCCCCGTGGAGGAAGATCTTTTCAGCGATGGGGGCAAATTCAACGA
TGTCGACAACCTGCAACTGGACCTTGGTGAAGATGATGCTCCCCTGGATA
AGATGGATCTGGGCGACGACGCTCTACCCGATAACCTTCTGCAAACGGAT
GACGCCATGGACCTCGGCGATGATCATGACGAGCCTGCCCCCAATGCCGA
CGATGAGCTGGAACGCGAGAGTGCCCTGAGCTCCATGGCGGACGATGATC
TAGACGACCTTGAAAAGTCTCAAGCGTTCGAATTAGACGTGAATGACGTG
AATGACGAAGATGATGAGGTTACTGCCAAGCATGCTCAACCGCCAAAGCG
CCGCAAGGTCGTTCTCATGGCACTGGACAAGGAGACCGACCAAAAGGTCA
AGGATGTCAGAGAACAATACTTGACGCGCGAGGAGATCATGAAGCCCTCT
TCATGGCTGCCCCGGGACCCCGTGCTGCTGACCCTGATGAACATGCAGAA
GAACGGAGACTTTGTATCGAATGTGCTCGGTGCGGGCCGAGGACGTGGCT
GGGCTCCCGAATTGCGTGACTTGCTTTCCTTCGATACCATCCGGAAGGCG
GGCGAGCTGAAGCGGAAGCGCGACAGTGGAATCGCCGATATGGATGTGGA
TGCGGCCACTGCGCCGGCCCTGGAGCTAGGCGAAGAAGAGGCCATTGTGC
CGGTCGATGAGGGAGTTGGTCTTGACTCGACTCTGCTCCAACGCTCCGAA
ATCGAGTTCCCCGGTGACGAGGAGGACCAGGCTCTGCGTCTGAGTGACGA
CGAAGGAATGAACCAACCATTGGAGGATGCCGACGACACGATCGTGGCCG
ACAGTGGTCCCGTGTCGATCGGTACGAAGCACGCCGTCCACATCCTTCGG
GAGCGCCTGGGTGAATCTGCGGCCGAGCAGAAGAAGAGCGTGAAGTTCCA
GGATTTGCTTCCGGAGAAGAAGGCATCCAAGGCGGACGCCACCAAGATGT
TCTTCGAGGTCCTCGTGCTGGCCACCAAGGACGCTGTACAAGTTGAACAA
CGACCGGAGACCGTGGGTGGACCTCTCAAGATCCGTGGCAAACGAGCCCT
CTGGGGCTCGTGGGCTGAGGAAGGGGCCAGCGGGGAGGCAGAGCAGCAGC
CCGTTGAGGCCACCGCCTAAATGTTCTACTCGGAGACCCTGTTGTCGAAG
ACCGGGCCACTGGCCCGCGTCTGGTTGTCGGCCAACCTGGAGCGCAAGCT
TTCCAAGTCGCACATCTTACAATCCGACATTGAAAGTAGTGTCAGTGCGA
TCGTGGACCAAGGCCAAGCCCCCATGGCTTTGCGATTGAGCGGTCAACTG
CTCCTGGGTGTGGTTCGCATCTACAGCCGCAAAGCGCGCTATCTGCTGGA
TGACTGCAATGAGGCCCTGATGAAGATCAAAATGGCCTTTCGTTTGACGA
ACAACAATGACTTGACCACTACGGTCGTTGCCCCTGGCGGCATCACTTTG
CCCGATGTACTGACGGAATCCGACTTGTTTATGAATCTGGATTCCTCCCT
TCTGTTGCCGCAAACCCTCAACCTCGAGCCCGAGGGTAAGCGGCCTGGTT
CTTCGATGGATTTCGGTAGTCAGCTGCTCCCCGATACTGGCTTGCGCCGC
TCCGCATCGCAAGAACCTGCGCGCCTCGAGGATCACACCCTGGTCGACTT
GGATTTGGGAGAAGATGAAACACCTCTCGGCCATGACTTCAGCATGGAAG
TCGGTCGAGATGCCCCGGCTCCCCGCCCCGTGGAGGAAGATCTTTTCAGC
GATGGGGGCAAATTCAACGATGTCGACAACCTGCAACTGGACCTTGGTGA
AGATGATGCTCCCCTGGATAAGATGGATCTGGGCGACGACGCTCTACCCG
ATAACCTTCTGCAAACGGATGACGCCATGGACCTCGGCGATGATCATGAC
GAGCCTGCCCCCAATGCCGACGATGAGCTGGAACGCGAGAGTGCCCTGAG
CTCCATGGCGGACGATGATCTAGACGACCTTGAAAAGTCTCAAGCGTTCG
AATTAGACGTGAATGACGTGAATGACGAAGATGATGAGGTTACTGCCAAG
CATGCTCAACCGCCAAAGCGCCGCAAGGTCGTTCTCATGGCACTGGACAA
GGAGACCGACCAAAAGGTCAAGGATGTCAGAGAACAATACTTGACGCGCG
AGGAGATCATGAAGCCCTCTTCATGGCTGCCCCGGGACCCCGTGCTGCTG
ACCCTGATGAACATGCAGAAGAACGGAGACTTTGTATCGAATGTGCTCGG
TGCGGGCCGAGGACGTGGCTGGGCTCCCGAATTGCGTGACTTGCTTTCCT
TCGATACCATCCGGAAGGCGGGCGAGCTGAAGCGGAAGCGCGACAGTGGA
ATCGCCGATATGGATGTGGATGCGGCCACTGCGCCGGCCCTGGAGCTAGG
CGAAGAAGAGGCCATTGTGCCGGTCGATGAGGGAGTTGGTCTTGACTCGA
CTCTGCTCCAACGCTCCGAAATCGAGTTCCCCGGTGACGAGGAGGACCAG
GCTCTGCGTCTGAGTGACGACGAAGGAATGAACCAACCATTGGAGGATGC
CGACGACACGATCGTGGCCGACAGTGGTCCCGTGTCGATCGGTACGAAGC
ACGCCGTCCACATCCTTCGGGAGCGCCTGGGTGAATCTGCGGCCGAGCAG
AAGAAGAGCGTGAAGTTCCAGGATTTGCTTCCGGAGAAGAAGGCATCCAA
GGCGGACGCCACCAAGATGTTCTTCGAGGTCCTCGTGCTGGCCACCAAGG
ACGCTGTACAAGTTGAACAACGACCGGAGACCGTGGGTGGACCTCTCAAG
ATCCGTGGCAAACGAGCCCTCTGGGGCTCGTGGGCTGAGGAAGGGGCCAG
CGGGGAGGCAGAGCAGCAGCCCGTTGAGGCCACCGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008278cohesin complex
Vocabulary: Biological Process
TermDefinition
GO:0007062sister chromatid cohesion
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009562ATCC10864_009562Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009562-T1.exon1ATCC10864_009562-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009562-T1.exon2ATCC10864_009562-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009562-T1.cdsATCC10864_009562-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009562-T1ATCC10864_009562-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04825
PFAMPF04824
InterProIPR006909
InterProIPR023093
InterProIPR006910
InterProIPR039781
InterProIPR036390
Properties
Property NameValue
NoteBUSCO:EOG0926115V
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000215supercontigMCQH01000215:89346..91187 +
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