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ATCC10864_009588-T1, ATCC10864_009588-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009588-T1
Unique NameATCC10864_009588-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000215:166196..167451+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009588-T1 ID=ATCC10864_009588-T1|Name=ATCC10864_009588-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1256bp|location=Sequence derived from alignment at MCQH01000215:166196..167451+ (Aspergillus niger ATCC 10864)
ATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACC
AGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCT
TTGGTGCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCA
TCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAA
GGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCAC
AGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTC
CTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGA
TATCTACTCATGGTAAATCCCCATTGTCTCCCATTTTGGCTCTACAATTA
TTATAGCAATTGGGGCAGCTAATCTTGAATACTAGGTCCCGTCATACACC
TCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAACT
ATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCC
CCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTC
TTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGC
GTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCC
GCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGA
CTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAA
CACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTT
CTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCGTAAG
TAGACCCTTGTTATCATCATTCATTGGCCATCTAATTTTGACGTTTGGTT
GTTTTGTAGTTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGC
TGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGA
GCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGT
GCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGA
GGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGT
TTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACC
AGATAG
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Coding sequence (CDS) from alignment at MCQH01000215:166196..167451+

>ATCC10864_009588-T1 ID=ATCC10864_009588-T1|Name=ATCC10864_009588-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3357bp|location=Sequence derived from alignment at MCQH01000215:166196..167451+ (Aspergillus niger ATCC 10864)
ATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACC
AGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCT
TTGGTGCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCA
TCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAA
GGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCAC
AGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTC
CTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGA
TATCTACTCATGGTCCCGTCATACACCTCTCCACAAGGTGAAGGTGGTCA
TCGTCGGCCAAGATCCTTATCATAACTATAACCAGGCCCATGGCCTTGCA
TTCTCCGTCCGCCCTCCAACTCCTGCCCCGCCTTCCCTCGTCAACATCTT
TAACGAAATTCATAATGACTATCCTTCTTTCCAAAGACCCGCAAACAAGG
GTGGCCTTCTCATACCCTGGGCTGAGCGTGGTGTACTGATGCTCAACACT
TGCTTGACCGTACGCGCGCATCAAGCCGCTAGCCATTCAAACAAGGGCTG
GGAACTGTTCACGCAGAAAGCCATAGACTTAGTGGCCCGAGTACGGACGC
GCGGTGTTGTTTTCCTTGCATGGGGAACACCCGCAGGGAAGCGCGTGACA
GGCATCAATAGAGCAAAGCATTATGTTCTGCAATCGGTCCACCCAAGCCC
GCTAAGTGCGTCAAGAGGATTCTTCGGAAACCAGCATTTCAAAAAATGTA
ATGAGTGGCTTGCTGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCA
TTGACTTCGAAGAGCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCC
CGCTCTCACTGGTGCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTA
GTTTGGAGGAAGAGGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAG
GCCGTTGACGAGTTTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGC
AGCAGAAGCGACCAGATAGATGGCCGGTAGAGCAGGCATGAAACGTGATG
CTAATCATTTGACGACACCAGAGGCCGATTCAAAGAAACCCAAGGCCAAT
GGAAGCATCACTTCATTCTTTGGTGCCCCCAAGAACAAGTCCAGCGACTC
AAAGGCCACTTCGTCTTCATCGGCCTTTAATAAGCAGAAATGGGTCGACT
CATTGACTTCAGAACAAAAGGAGCTCCTTCAACTTGAGATTGACACTCTT
GATGAGAGCTGGCTGGCACAGCTCAAGGAGGAAGTCGTCAAGCCTGAGTT
CCTGGCCCTGAAGCGCTTCCTCCAGAAGGAAAAGCAATCGGGAGCTAAAA
TCTTTCCTCCCGAAGAAGATATCTACTCATGGTCCCGTCATACACCTCTC
CACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAACTATAA
CCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCCCCGC
CTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTCTTTC
CAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGCGTGG
TGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCCGCTA
GCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGACTTA
GTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAACACC
CGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTTCTGC
AATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCTTCGGAAAC
CAGCATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTATGGTGCCGA
CGAAGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCAGCTCTCCTT
TTGCCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAATAAGCCTATC
GCTAAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAGGACAACAGA
GCCTGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACGATCTCGATG
CGCTGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGATGGCCGGTAGA
GCAGGCATGAAACGTGATGCTAATCATTTGACGACACCAGAGGCCGATTC
AAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCTTTGGTGCCCCCA
AGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCATCGGCCTTTAAT
AAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAAGGAGCTCCTTCA
ACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCACAGCTCAAGGAGG
AAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTCCTCCAGAAGGAA
AAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGATATCTACTCATG
GTCCCGTCATACACCTCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAG
ATCCTTATCATAACTATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGC
CCTCCAACTCCTGCCCCGCCTTCCCTCGTCAACATCTTTAACGAAATTCA
TAATGACTATCCTTCTTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCA
TACCCTGGGCTGAGCGTGGTGTACTGATGCTCAACACTTGCTTGACCGTA
CGCGCGCATCAAGCCGCTAGCCATTCAAACAAGGGCTGGGAACTGTTCAC
GCAGAAAGCCATAGACTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTT
TCCTTGCATGGGGAACACCCGCAGGGAAGCGCGTGACAGGCATCAATAGA
GCAAAGCATTATGTTCTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTC
AAGAGGATTCTTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTG
CTGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAG
AGCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGG
TGCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAG
AGGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAG
TTTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGAC
CAGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0004844uracil DNA N-glycosylase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009588ATCC10864_009588Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009588-T1.exon1ATCC10864_009588-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009588-T1.exon2ATCC10864_009588-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009588-T1.exon3ATCC10864_009588-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009588-T1.cdsATCC10864_009588-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009588-T1ATCC10864_009588-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036895
InterProIPR005122
InterProIPR002043
InterProIPR018085
PFAMPF03167
Properties
Property NameValue
NoteBUSCO:EOG09264GMT
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000215supercontigMCQH01000215:166196..167451 +
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