You are here

ATCC10864_009632-T1, ATCC10864_009632-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009632-T1
Unique NameATCC10864_009632-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000216:93139..93764-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009632-T1 ID=ATCC10864_009632-T1|Name=ATCC10864_009632-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=626bp|location=Sequence derived from alignment at MCQH01000216:93139..93764- (Aspergillus niger ATCC 10864)
ATGAAGCGTCTCAATTCCAACAAAGATGACAACGTCCCCATCTACATCTA CTTCTTGCTGGTTGTGATTCTATCCCTCAGCTTCCTGGGCACCTATCTGG ACTCTACCAAGCGTGTCAAGTCCGCCACACGGTCCTAATCAGACATTACT ATTATATCACCGTTATAACATAGCCATTAAAATCAACAAAGATGGCCGGC ACATGCTCCATGCTCTGCTTGATTCTTATCACGTTGTTCAGTATGCAGCC CCTCTCTTGAATACTGACACTGTCCTATTCTAAAGCTGAAGCTAATACTC TTGGTTATCTAGTACCTCCTCTCGGTGTGTTTATGATCTCGGGTTGCAGT GTTGACCTACTTATCAATATACTCTTGACGATTCTCGGGTCCGTTCTAAT CATACTCCTTCTTGCCTTCGCAGGATTACCCTGAAGTGAATAGTTTCTGA CTGAGTCCACTTTGTGCAGGTACCTGCCAGGCCATGTCCACGCATTCTAT CTCGAATACGTATACTACGCCAATCGCAACGCAGGAACCGGCGATGCACC ACGTCGGGCGCCGGGAGTATATTCCGAGCGGATTCAGCGCGGCGGTCATC ACACAACGTATGGCACGATTCCGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000216:93139..93764-

>ATCC10864_009632-T1 ID=ATCC10864_009632-T1|Name=ATCC10864_009632-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1584bp|location=Sequence derived from alignment at MCQH01000216:93139..93764- (Aspergillus niger ATCC 10864)
GTACCTGCCAGGCCATGTCCACGCATTCTATCTCGAATACGTATACTACG
CCAATCGCAACGCAGGAACCGGCGATGCACCACGTCGGGCGCCGGGAGTA
TATTCCGAGCGGATTCAGCGCGGCGGTCATCACACAACGTATGGCACGAT
TCCGTGATACCTCCTCTCGGTGTGTTTATGATCTCGGGTTGCAGTGTTGA
CCTACTTATCAATATACTCTTGACGATTCTCGGATGGCCGGCACATGCTC
CATGCTCTGCTTGATTCTTATCACGTTGTTCAATGAAGCGTCTCAATTCC
AACAAAGATGACAACGTCCCCATCTACATCTACTTCTTGCTGGTTGTGAT
TCTATCCCTCAGCTTCCTGGGCACCTATCTGGACTCTACCAAGCGTGTAC
CTGCCAGGCCATGTCCACGCATTCTATCTCGAATACGTATACTACGCCAA
TCGCAACGCAGGAACCGGCGATGCACCACGTCGGGCGCCGGGAGTATATT
CCGAGCGGATTCAGCGCGGCGGTCATCACACAACGTATGGCACGATTCCG
TGATACCTCCTCTCGGTGTGTTTATGATCTCGGGTTGCAGTGTTGACCTA
CTTATCAATATACTCTTGACGATTCTCGGATGGCCGGCACATGCTCCATG
CTCTGCTTGATTCTTATCACGTTGTTCAATGAAGCGTCTCAATTCCAACA
AAGATGACAACGTCCCCATCTACATCTACTTCTTGCTGGTTGTGATTCTA
TCCCTCAGCTTCCTGGGCACCTATCTGGACTCTACCAAGCGTGTACCTGC
CAGGCCATGTCCACGCATTCTATCTCGAATACGTATACTACGCCAATCGC
AACGCAGGAACCGGCGATGCACCACGTCGGGCGCCGGGAGTATATTCCGA
GCGGATTCAGCGCGGCGGTCATCACACAACGTATGGCACGATTCCGTGAT
ACCTCCTCTCGGTGTGTTTATGATCTCGGGTTGCAGTGTTGACCTACTTA
TCAATATACTCTTGACGATTCTCGGATGGCCGGCACATGCTCCATGCTCT
GCTTGATTCTTATCACGTTGTTCAATGAAGCGTCTCAATTCCAACAAAGA
TGACAACGTCCCCATCTACATCTACTTCTTGCTGGTTGTGATTCTATCCC
TCAGCTTCCTGGGCACCTATCTGGACTCTACCAAGCGTGTACCTGCCAGG
CCATGTCCACGCATTCTATCTCGAATACGTATACTACGCCAATCGCAACG
CAGGAACCGGCGATGCACCACGTCGGGCGCCGGGAGTATATTCCGAGCGG
ATTCAGCGCGGCGGTCATCACACAACGTATGGCACGATTCCGTGATACCT
CCTCTCGGTGTGTTTATGATCTCGGGTTGCAGTGTTGACCTACTTATCAA
TATACTCTTGACGATTCTCGGATGGCCGGCACATGCTCCATGCTCTGCTT
GATTCTTATCACGTTGTTCAATGAAGCGTCTCAATTCCAACAAAGATGAC
AACGTCCCCATCTACATCTACTTCTTGCTGGTTGTGATTCTATCCCTCAG
CTTCCTGGGCACCTATCTGGACTCTACCAAGCGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009632ATCC10864_009632Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009632-T1ATCC10864_009632-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009632-T1.cdsATCC10864_009632-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009632-T1.exon4ATCC10864_009632-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009632-T1.exon3ATCC10864_009632-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009632-T1.exon2ATCC10864_009632-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009632-T1.exon1ATCC10864_009632-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000612
PFAMPF01679
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000216supercontigMCQH01000216:93139..93764 -