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ATCC10864_009649-T1, ATCC10864_009649-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009649-T1
Unique NameATCC10864_009649-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:30458..31202-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009649-T1 ID=ATCC10864_009649-T1|Name=ATCC10864_009649-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=745bp|location=Sequence derived from alignment at MCQH01000217:30458..31202- (Aspergillus niger ATCC 10864)
ATGCGTAAGTATCATCTCCTTGGTGAAATCGAATAGGCGAACTAATATGT
ATCCCATTGGGCAGCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATGT
AAGTTGCATATTCTGAAGATCACTCGGCGCGATTTTTGACGCAGCTGCTA
ACGATCTTTTATAGCCACCTGAGAGTGACTGGTGGTGAGGTCGGTGCCCA
GTCTGCTCTGGCCCCCAAGATTGGTCCTCTCGGTCTGTCCCCCAAGAAGA
TCGGTGAAGATATTGCCAAGAACACTGGTGACTGGGTAAGCACATCGTCC
GGGTCAACCATAGGAGGTTACAGTGCTAACAGCATCTTTTTGGTATTATA
GAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCAGGCCG
CGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCCTCAAG
GAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGCAAGTC
CATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCACCGCT
CTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTACCGCT
TTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTCTCCGA
CGACGTCAAGGCTGGCGAGATCGACAGTATGTTAACCACCATACGATATC
TTTCGAGACTTTGCCACTAACTATTTCGCAGTCCCCTCCGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000217:30458..31202-

>ATCC10864_009649-T1 ID=ATCC10864_009649-T1|Name=ATCC10864_009649-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2490bp|location=Sequence derived from alignment at MCQH01000217:30458..31202- (Aspergillus niger ATCC 10864)
TCCCCTCCGAGTAAAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAG
AACCGTCAGGCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCAT
CAAGGCCCTCAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCA
AGCACAGCAAGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAG
ATGCGCCACCGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGAT
CCTCGGTACCGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCA
AGGACGTCTCCGACGACGTCAAGGCTGGCGAGATCGACACCACCTGAGAG
TGACTGGTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGT
CCTCTCGGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACAC
TGGTGACTGGCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATATGCTC
CCCTCCGAGTAAAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAA
CCGTCAGGCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCA
AGGCCCTCAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAG
CACAGCAAGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGAT
GCGCCACCGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCC
TCGGTACCGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAG
GACGTCTCCGACGACGTCAAGGCTGGCGAGATCGACACCACCTGAGAGTG
ACTGGTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCC
TCTCGGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTG
GTGACTGGCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATATGCTCCC
CTCCGAGTAAAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACC
GTCAGGCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAG
GCCCTCAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCA
CAGCAAGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGC
GCCACCGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTC
GGTACCGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGA
CGTCTCCGACGACGTCAAGGCTGGCGAGATCGACACCACCTGAGAGTGAC
TGGTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCTC
TCGGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGGT
GACTGGCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATATGCTCCCCT
CCGAGTAAAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGT
CAGGCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGC
CCTCAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACA
GCAAGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGC
CACCGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGG
TACCGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACG
TCTCCGACGACGTCAAGGCTGGCGAGATCGACACCACCTGAGAGTGACTG
GTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCTCTC
GGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGGTGA
CTGGCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATATGCTCCCCTCC
GAGTAAAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCA
GGCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCC
TCAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGC
AAGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCA
CCGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTA
CCGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTC
TCCGACGACGTCAAGGCTGGCGAGATCGACACCACCTGAGAGTGACTGGT
GGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCTCTCGG
TCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGGTGACT
GGCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATATGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL12ATCC10864_009649Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009649-T1ATCC10864_009649-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009649-T1.cdsATCC10864_009649-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009649-T1.exon5ATCC10864_009649-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_009649-T1.exon4ATCC10864_009649-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009649-T1.exon3ATCC10864_009649-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009649-T1.exon2ATCC10864_009649-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009649-T1.exon1ATCC10864_009649-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR020784
InterProIPR036769
InterProIPR000911
PFAMPF03946
InterProIPR020783
PFAMPF00298
InterProIPR036796
Properties
Property NameValue
NoteBUSCO:EOG092651LN
Product60S ribosomal protein L12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:30458..31202 -
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