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ATCC10864_009653-T1, ATCC10864_009653-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009653-T1
Unique NameATCC10864_009653-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:38989..39904-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009653-T1 ID=ATCC10864_009653-T1|Name=ATCC10864_009653-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=916bp|location=Sequence derived from alignment at MCQH01000217:38989..39904- (Aspergillus niger ATCC 10864)
ATGCGATGGCCGCCATGGGCTCCCAACACGCAAGCCTCCAACAATGACCA
CCCTACCACCACGAAGAACAATGACCCCAAGAACCTACTCGACTGGAGCG
CCTTCACCGAACTCCGCACCCTCATCCCAACTCTAGTCCTCACAACCGGC
ATCCTCAGCGCCTTCACCCTGCACCGGAACTACCTCCGCCGGTTCCCCAC
AGCAGTCAACATCACGCCCGCATATTACCGTCGCCGCAGCATCCTGGGAA
AAGTAACCAGCGTCGGTGACGGCGACAACTTTCGCATCTATCATACACCC
GGCGGAAGACTCGCGGGTTGGGGCTGGGTACCCTGGAAGAAGGTTCCCAC
GACGCGGAAGGAATTGAGAGATCAGACTGTATGTATACCTCCCCACTTTT
TTTTTTTTTCATCTACGTTTATGCTACCGGAGACTATATTTCTAACATCA
GAATGAAATTAAATAGATCCATGTCCGGATAGCTGGTGTCGACGCCCCCG
AACAAGCGCACTTCGGACGCCCCGCGCAACCCTTCGGCAAAGAAGCACAC
GAGTGGCTAACGGGGTACTTGATAAACCGGCGCGTGCGGATATATGTGCA
TCGACAGGACCAGTATCAGCGTGTGGTGGCGACGGTGTTTGTGCGGCGGG
CGCTGGATTTCCCGGTTCCGTTTCGCAGGCGCGATGTCGGGTATGAGATG
TTGAGGAAGGGGTTGGCAACAGTGTATGAGGCGAAGGTTGGGGCGGAGTT
TGGGGGTGAGGTGATGGAGAAGAAGTATCGGAGTGCGGAGTGGTGGGCGA
AGGCGAGGGGGTTGGGGCTGTGGAAGGGGTTCAAGAAGAATAGGGATGCG
TGGGAGAGTCCGAGGGAGTTTAAGACTAGGACGGGGATGGAAGATGTGGG
GGATGGGAAGAAGTAG
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Coding sequence (CDS) from alignment at MCQH01000217:38989..39904-

>ATCC10864_009653-T1 ID=ATCC10864_009653-T1|Name=ATCC10864_009653-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1656bp|location=Sequence derived from alignment at MCQH01000217:38989..39904- (Aspergillus niger ATCC 10864)
ATCCATGTCCGGATAGCTGGTGTCGACGCCCCCGAACAAGCGCACTTCGG
ACGCCCCGCGCAACCCTTCGGCAAAGAAGCACACGAGTGGCTAACGGGGT
ACTTGATAAACCGGCGCGTGCGGATATATGTGCATCGACAGGACCAGTAT
CAGCGTGTGGTGGCGACGGTGTTTGTGCGGCGGGCGCTGGATTTCCCGGT
TCCGTTTCGCAGGCGCGATGTCGGGTATGAGATGTTGAGGAAGGGGTTGG
CAACAGTGTATGAGGCGAAGGTTGGGGCGGAGTTTGGGGGTGAGGTGATG
GAGAAGAAGTATCGGAGTGCGGAGTGGTGGGCGAAGGCGAGGGGGTTGGG
GCTGTGGAAGGGGTTCAAGAAGAATAGGGATGCGTGGGAGAGTCCGAGGG
AGTTTAAGACTAGGACGGGGATGGAAGATGTGGGGGATGGGAAGAAGTAG
ATGCGATGGCCGCCATGGGCTCCCAACACGCAAGCCTCCAACAATGACCA
CCCTACCACCACGAAGAACAATGACCCCAAGAACCTACTCGACTGGAGCG
CCTTCACCGAACTCCGCACCCTCATCCCAACTCTAGTCCTCACAACCGGC
ATCCTCAGCGCCTTCACCCTGCACCGGAACTACCTCCGCCGGTTCCCCAC
AGCAGTCAACATCACGCCCGCATATTACCGTCGCCGCAGCATCCTGGGAA
AAGTAACCAGCGTCGGTGACGGCGACAACTTTCGCATCTATCATACACCC
GGCGGAAGACTCGCGGGTTGGGGCTGGGTACCCTGGAAGAAGGTTCCCAC
GACGCGGAAGGAATTGAGAGATCAGACTATCCATGTCCGGATAGCTGGTG
TCGACGCCCCCGAACAAGCGCACTTCGGACGCCCCGCGCAACCCTTCGGC
AAAGAAGCACACGAGTGGCTAACGGGGTACTTGATAAACCGGCGCGTGCG
GATATATGTGCATCGACAGGACCAGTATCAGCGTGTGGTGGCGACGGTGT
TTGTGCGGCGGGCGCTGGATTTCCCGGTTCCGTTTCGCAGGCGCGATGTC
GGGTATGAGATGTTGAGGAAGGGGTTGGCAACAGTGTATGAGGCGAAGGT
TGGGGCGGAGTTTGGGGGTGAGGTGATGGAGAAGAAGTATCGGAGTGCGG
AGTGGTGGGCGAAGGCGAGGGGGTTGGGGCTGTGGAAGGGGTTCAAGAAG
AATAGGGATGCGTGGGAGAGTCCGAGGGAGTTTAAGACTAGGACGGGGAT
GGAAGATGTGGGGGATGGGAAGAAGTAGATGCGATGGCCGCCATGGGCTC
CCAACACGCAAGCCTCCAACAATGACCACCCTACCACCACGAAGAACAAT
GACCCCAAGAACCTACTCGACTGGAGCGCCTTCACCGAACTCCGCACCCT
CATCCCAACTCTAGTCCTCACAACCGGCATCCTCAGCGCCTTCACCCTGC
ACCGGAACTACCTCCGCCGGTTCCCCACAGCAGTCAACATCACGCCCGCA
TATTACCGTCGCCGCAGCATCCTGGGAAAAGTAACCAGCGTCGGTGACGG
CGACAACTTTCGCATCTATCATACACCCGGCGGAAGACTCGCGGGTTGGG
GCTGGGTACCCTGGAAGAAGGTTCCCACGACGCGGAAGGAATTGAGAGAT
CAGACT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LCL3ATCC10864_009653Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009653-T1ATCC10864_009653-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009653-T1.cdsATCC10864_009653-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009653-T1.exon2ATCC10864_009653-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009653-T1.exon1ATCC10864_009653-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00565
InterProIPR016071
InterProIPR035437
Properties
Property NameValue
NoteBUSCO:EOG092644K0
Productputative endonuclease lcl3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:38989..39904 -
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