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ATCC10864_009689-T1, ATCC10864_009689-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009689-T1
Unique NameATCC10864_009689-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:160530..161589-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009689-T1 ID=ATCC10864_009689-T1|Name=ATCC10864_009689-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1060bp|location=Sequence derived from alignment at MCQH01000217:160530..161589- (Aspergillus niger ATCC 10864)
ATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGC
CCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCA
GCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTC
GTCCTGATGGGTAAGAACACCATGGTATGATGATCCTCTGAAACCACCGG
TGCCCGTTCCGCATGCTGATGAGTTGTCCAGGTTCGCCGTGCCATCAAGG
GCTTCGTCAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAG
GGTAAGTGAAGTTGCTTCCAGAGTCTGCGGCGATGTCAATTGGCTAACAT
TTGCCTTCCGCACAGGTAACGTTGGTTTCATCTTCACCAACGGTGACCTC
AAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTCCCGCTCG
TGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGTAACACCG
GTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGTCCCCACC
AAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGCTCGTTGA
GGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAACATGCTGA
ACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTACGACCAG
GGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTCAGCTCCT
CGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCCCTGGCTG
TCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAACAGCTAC
AAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGCCCGAGAT
TGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCCTCCGCTG
CTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGCCGCTGAG
GCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCTTCGGCCT
CTTCGACTAA
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Coding sequence (CDS) from alignment at MCQH01000217:160530..161589-

>ATCC10864_009689-T1 ID=ATCC10864_009689-T1|Name=ATCC10864_009689-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2817bp|location=Sequence derived from alignment at MCQH01000217:160530..161589- (Aspergillus niger ATCC 10864)
GTAACGTTGGTTTCATCTTCACCAACGGTGACCTCAAGGCCACCAAGGAG
AAGATCCTGGCCAACCGTGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGC
TCCTGGCGATGTCTGGGTCCCCGCCGGTAACACCGGTATGGAACCCGGTA
AGACCTCTTTCTTCCAGGCTCTTGGTGTCCCCACCAAGATTGCTCGTGGT
ACCATTGAAATTACCACCGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGT
CGGTCCCTCCGAGGCCACCCTGCTCAACATGCTGAACATCTCTCCCTTCA
CCTATGGTATGACCATCCAGCAGGTCTACGACCAGGGTCAGTGCTTCAGC
TCTGCTGTCCTGGACATTGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAG
CGCCATTAACACCATCACCACCATCTCCCTGGCTGTCAGCTACCCCACTA
TCCCCGCTGTCATGCACTCCCTCGTCAACAGCTACAAGAAGGTTCTTGCC
GTTGCTGTTGAGACCGAGTACAGCTGGCCCGAGATTGAGGAGCTCAAGGA
CCGTATTGCCAACCCTGACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCG
CTGCCCCTGCTGCCGGTGGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAA
GAGGAGGAGTCCGATGAGGACATGGGCTTCGGCCTCTTCGACTAAGTTCG
CCGTGCCATCAAGGGCTTCGTCAACGACAACCCCGAGTACGAGCGTCTGC
TCCCCTTCGTTAAGGATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTT
CGAGAAGCTCAAGGCCCTTCTCGATGAGTACAAGACGGTCTTCATTGTCG
GTGTCGACAATGTCAGCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTC
CGTGGCGAGGGTGTCGTCCTGATGGGTAAGAACACCATGGTAACGTTGGT
TTCATCTTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATCCTGGC
CAACCGTGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGGCGATG
TCTGGGTCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCTCTTTC
TTCCAGGCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATTGAAAT
TACCACCGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCG
AGGCCACCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATGGTATG
ACCATCCAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCT
GGACATTGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCATTAACA
CCATCACCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCGCTGTC
ATGCACTCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGA
GACCGAGTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTATTGCCA
ACCCTGACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCT
GCCGGTGGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTC
CGATGAGGACATGGGCTTCGGCCTCTTCGACTAAGTTCGCCGTGCCATCA
AGGGCTTCGTCAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTT
AAGGATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCA
AGGCCCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAAT
GTCAGCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGG
TGTCGTCCTGATGGGTAAGAACACCATGGTAACGTTGGTTTCATCTTCAC
CAACGGTGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCG
CTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCC
GCCGGTAACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCT
TGGTGTCCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCACCGACC
TCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTG
CTCAACATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATCCAGCA
GGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGG
AGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCACCACC
ATCTCCCTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCT
CGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACA
GCTGGCCCGAGATTGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCT
TACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGC
TCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACA
TGGGCTTCGGCCTCTTCGACTAAGTTCGCCGTGCCATCAAGGGCTTCGTC
AACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGATGGGGG
GCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTC
GATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCA
GCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGA
TGGGTAAGAACACCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009689ATCC10864_009689Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009689-T1ATCC10864_009689-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009689-T1.cdsATCC10864_009689-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009689-T1.exon3ATCC10864_009689-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009689-T1.exon2ATCC10864_009689-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009689-T1.exon1ATCC10864_009689-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00466
InterProIPR043141
InterProIPR030670
PFAMPF00428
InterProIPR040637
InterProIPR043164
InterProIPR001790
PFAMPF17777
Properties
Property NameValue
NoteBUSCO:EOG09264G1I
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:160530..161589 -
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