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ATCC10864_009734-T1, ATCC10864_009734-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009734-T1
Unique NameATCC10864_009734-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:297097..298042+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009734-T1 ID=ATCC10864_009734-T1|Name=ATCC10864_009734-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=946bp|location=Sequence derived from alignment at MCQH01000217:297097..298042+ (Aspergillus niger ATCC 10864)
ATGGCCTTTCCCCTCCCGCGGGGCATCACGCCCCCGGAGATCTCCTTCCT
CGCGGAGATGGAGATGGTCACCATCTTGCCTCGTCAGCGACTCGAGGGGC
TTGAATTACTGGGAGTACGTCCTATACACACATCTTCCGCTACTAATCAC
AGCTAACAACTCTTCCAATAGGGCCCCGTCTCCCCCCTCCTCCCACCCCG
ACGCACCTCCCTCCCCCTCTGGCTTGCCCTCCTCCTCAAACGCCAACGCC
GTGCCAACATCCTCCCCCCGCCCTGGCTCCACCCCGAATCTCTGGAGCTC
ATCCTCGAAATCGAGACCCAAAACGACGAATACCAGCACGCCTTCTCTCC
GCCACCTCCACTGCCCGGCCAGCCCGCCCCGGGAGATCACCGTCGCGCTC
CGCTCGCAACCCCGCGCTACACTCCCTCCGGCGAGAAATACTACCCTGCG
CCGCCGTTCCTGCCTCAGAATACAGCACGCGATCACATCCCGCCGGGCGA
GCCACCGGCACTACCGTTCCATTGGTTGGAGGTAGGGACGATGTTGCTGG
AGGCGGCGAGCGATGATCTTGTGGATCCGGATCAGACGAGACGGCTGTTG
AAGGAGCTGAGGGAAGTGAGGATGGCGAAGGTTAGGGCGGGTGTGGATGT
CCTAGATGCGGCGGCTATGGGGGGTGGGGGTGTTGCGTTGACGGGTGTGG
GAGCTATGGAGTTGGGAGAGGGGAGGAGGTTCATTGCGGGGGTGGTGGAT
GGACTGAGGTATGTCCTTGTCACTTCTTCTATTCTTTTGTTTCACAATCG
TTGTTGGAGGTGGGTTGCTAACGAGTCATGTCGATAGGCGCATCGGGGCG
TCCAAGGAACAGGCGAGGAGAGAAGAGATGGCAGAGGAAATGGCGAATGG
GGGGTATGATGGGACACAAGACGATGATGATGAAATGGAGTTTTAG
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Coding sequence (CDS) from alignment at MCQH01000217:297097..298042+

>ATCC10864_009734-T1 ID=ATCC10864_009734-T1|Name=ATCC10864_009734-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2430bp|location=Sequence derived from alignment at MCQH01000217:297097..298042+ (Aspergillus niger ATCC 10864)
ATGGCCTTTCCCCTCCCGCGGGGCATCACGCCCCCGGAGATCTCCTTCCT
CGCGGAGATGGAGATGGTCACCATCTTGCCTCGTCAGCGACTCGAGGGGC
TTGAATTACTGGGAGGCCCCGTCTCCCCCCTCCTCCCACCCCGACGCACC
TCCCTCCCCCTCTGGCTTGCCCTCCTCCTCAAACGCCAACGCCGTGCCAA
CATCCTCCCCCCGCCCTGGCTCCACCCCGAATCTCTGGAGCTCATCCTCG
AAATCGAGACCCAAAACGACGAATACCAGCACGCCTTCTCTCCGCCACCT
CCACTGCCCGGCCAGCCCGCCCCGGGAGATCACCGTCGCGCTCCGCTCGC
AACCCCGCGCTACACTCCCTCCGGCGAGAAATACTACCCTGCGCCGCCGT
TCCTGCCTCAGAATACAGCACGCGATCACATCCCGCCGGGCGAGCCACCG
GCACTACCGTTCCATTGGTTGGAGGTAGGGACGATGTTGCTGGAGGCGGC
GAGCGATGATCTTGTGGATCCGGATCAGACGAGACGGCTGTTGAAGGAGC
TGAGGGAAGTGAGGATGGCGAAGGTTAGGGCGGGTGTGGATGTCCTAGAT
GCGGCGGCTATGGGGGGTGGGGGTGTTGCGTTGACGGGTGTGGGAGCTAT
GGAGTTGGGAGAGGGGAGGAGGTTCATTGCGGGGGTGGTGGATGGACTGA
GGCGCATCGGGGCGTCCAAGGAACAGGCGAGGAGAGAAGAGATGGCAGAG
GAAATGGCGAATGGGGGGTATGATGGGACACAAGACGATGATGATGAAAT
GGAGTTTTAGATGGCCTTTCCCCTCCCGCGGGGCATCACGCCCCCGGAGA
TCTCCTTCCTCGCGGAGATGGAGATGGTCACCATCTTGCCTCGTCAGCGA
CTCGAGGGGCTTGAATTACTGGGAGGCCCCGTCTCCCCCCTCCTCCCACC
CCGACGCACCTCCCTCCCCCTCTGGCTTGCCCTCCTCCTCAAACGCCAAC
GCCGTGCCAACATCCTCCCCCCGCCCTGGCTCCACCCCGAATCTCTGGAG
CTCATCCTCGAAATCGAGACCCAAAACGACGAATACCAGCACGCCTTCTC
TCCGCCACCTCCACTGCCCGGCCAGCCCGCCCCGGGAGATCACCGTCGCG
CTCCGCTCGCAACCCCGCGCTACACTCCCTCCGGCGAGAAATACTACCCT
GCGCCGCCGTTCCTGCCTCAGAATACAGCACGCGATCACATCCCGCCGGG
CGAGCCACCGGCACTACCGTTCCATTGGTTGGAGGTAGGGACGATGTTGC
TGGAGGCGGCGAGCGATGATCTTGTGGATCCGGATCAGACGAGACGGCTG
TTGAAGGAGCTGAGGGAAGTGAGGATGGCGAAGGTTAGGGCGGGTGTGGA
TGTCCTAGATGCGGCGGCTATGGGGGGTGGGGGTGTTGCGTTGACGGGTG
TGGGAGCTATGGAGTTGGGAGAGGGGAGGAGGTTCATTGCGGGGGTGGTG
GATGGACTGAGGCGCATCGGGGCGTCCAAGGAACAGGCGAGGAGAGAAGA
GATGGCAGAGGAAATGGCGAATGGGGGGTATGATGGGACACAAGACGATG
ATGATGAAATGGAGTTTTAGATGGCCTTTCCCCTCCCGCGGGGCATCACG
CCCCCGGAGATCTCCTTCCTCGCGGAGATGGAGATGGTCACCATCTTGCC
TCGTCAGCGACTCGAGGGGCTTGAATTACTGGGAGGCCCCGTCTCCCCCC
TCCTCCCACCCCGACGCACCTCCCTCCCCCTCTGGCTTGCCCTCCTCCTC
AAACGCCAACGCCGTGCCAACATCCTCCCCCCGCCCTGGCTCCACCCCGA
ATCTCTGGAGCTCATCCTCGAAATCGAGACCCAAAACGACGAATACCAGC
ACGCCTTCTCTCCGCCACCTCCACTGCCCGGCCAGCCCGCCCCGGGAGAT
CACCGTCGCGCTCCGCTCGCAACCCCGCGCTACACTCCCTCCGGCGAGAA
ATACTACCCTGCGCCGCCGTTCCTGCCTCAGAATACAGCACGCGATCACA
TCCCGCCGGGCGAGCCACCGGCACTACCGTTCCATTGGTTGGAGGTAGGG
ACGATGTTGCTGGAGGCGGCGAGCGATGATCTTGTGGATCCGGATCAGAC
GAGACGGCTGTTGAAGGAGCTGAGGGAAGTGAGGATGGCGAAGGTTAGGG
CGGGTGTGGATGTCCTAGATGCGGCGGCTATGGGGGGTGGGGGTGTTGCG
TTGACGGGTGTGGGAGCTATGGAGTTGGGAGAGGGGAGGAGGTTCATTGC
GGGGGTGGTGGATGGACTGAGGCGCATCGGGGCGTCCAAGGAACAGGCGA
GGAGAGAAGAGATGGCAGAGGAAATGGCGAATGGGGGGTATGATGGGACA
CAAGACGATGATGATGAAATGGAGTTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF2ATCC10864_009734Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009734-T1.exon1ATCC10864_009734-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009734-T1.exon2ATCC10864_009734-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009734-T1.exon3ATCC10864_009734-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009734-T1.cdsATCC10864_009734-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009734-T1ATCC10864_009734-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036224
PFAMPF05916
InterProIPR021151
InterProIPR007257
Properties
Property NameValue
NoteBUSCO:EOG09264QRY
ProductDNA replication protein psf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:297097..298042 +
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