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ATCC10864_009749-T1, ATCC10864_009749-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009749-T1
Unique NameATCC10864_009749-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000217:343395..344883-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009749-T1 ID=ATCC10864_009749-T1|Name=ATCC10864_009749-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1489bp|location=Sequence derived from alignment at MCQH01000217:343395..344883- (Aspergillus niger ATCC 10864)
ATGGCCACCGATCCCTCCCTGCAAGATCCTCTCCTCTCGCTCCGTCGCGC
CATCGCAGCCGGCAACCTCCCCACGCCAACAACCTCCAGCGACCTCTCCG
ACCAAAATGCGACCGACGACCTTGCAAAAGCCACCCATCTCTACTTCCAA
CATCCCCTCCCTCAAACAATCCCCCTCACAACACCCACCCGCTTCGTCTC
CAGCTCCTCCGACTCCGCCGTCGACCTCCGCAGTATCTTCTTCGCGTGGC
AGAAGAAAGATGTCGCCATTCCAGAGTACATTGCCTCGGCGCAGGAGCTT
AACGAGTCGCTGAAGCAAAAGGAGCGCAAGGAAGGCGAGGAAGAGGAGAA
AGTTCAGAACTTGGTTTTCGTCGAGCGCTTGGATCTTCTGACTTGGCTGG
AGGGCGCGTCTGATGAGAGTGAATACATCAAGCCGTTGGAGGGTGCGGCT
GCTGCGGCCGCGGCTGCGGCTTCCGCTGCTGCTCAGGCGCAGGCGTCGGC
GAATATTGCTTCGGGGGCTGCTGGTGGAGTTTCTGCTGTGCCGAGTGGTG
CTCCTGGGGGTGGTGCTGCTGCTGCGCAGACTCAGCAGGGTAGGGCGGCC
AAGGTCATTGATCCTAGGTTGCAGGAGATTTATAACGGAGAGCGGAAGAT
GGGGGATCGGAATAGTGTGCTACGGGGAATCAAGCCGACGGTATGTTCAT
GCACAGGGGGAAGAGGCTCTACAGTATGCTAATAAGGGATCAACGTAGGA
CTTCTCTCACGTCCGCAAAACCGCCGAATCTATGCTTGGACGCAACCGCT
CCCGGCCGGGACAATACCCTGCTGGCGTGAAAGCCGGCAGCAAGCCGCAA
TCCATGGTGGTGCCGTCTCCATCGGCCGGCCTGTCCCAGCCACGCAAGGC
AAGCAAGACGCAAGACCCCATCATCCTCCTCTCACCCTCGGCCTCATCGC
TCATCCGCATGTCCAACGTGCGCTCCTTCCTGCAGGATGGTGTCTTCATC
CCTCCCGATCACCCTACTCTTTCCATGTCCAACTCCAATATCCTCTACAT
CTCCCGTCCGCTGCGCATGCACTCGGACCCGTCCAGCTCCTCTCTTCGTC
CTGGCGGTGGCAGCTCCTCGCAAGTCACGTCCCGGAAACCTACACGCTTC
ATCCTCGTCGATAGCACGGCCAACTTCCGTCCGGATTACTGGCAGCGTCT
GGTTGCCGTTTTCACGACGGGTCAGACCTGGCAGTTCAAGTCATACAAGT
GGTCTTCGCCACCGGAGCTCTTCAAGCATGCCACAGGTGTCTATGTCGGA
TGGCGCGGAGAGGATATTCCTCGTGAAGTGAAGAGCTGGGGCAGGGGAGT
GCAGAGCTACGCGGTCGAGCGCTGGGACGAGAAGGGAGGAGCCCACGGGG
CGGGCCGGTGGCGTGATCGGGAAGTGGTCGAAGGAATCTGGACAGCGATC
GAAGAGGGAATGAGACTGCGAGGCTGGGGATCAAAGTAG
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Coding sequence (CDS) from alignment at MCQH01000217:343395..344883-

>ATCC10864_009749-T1 ID=ATCC10864_009749-T1|Name=ATCC10864_009749-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2862bp|location=Sequence derived from alignment at MCQH01000217:343395..344883- (Aspergillus niger ATCC 10864)
GACTTCTCTCACGTCCGCAAAACCGCCGAATCTATGCTTGGACGCAACCG
CTCCCGGCCGGGACAATACCCTGCTGGCGTGAAAGCCGGCAGCAAGCCGC
AATCCATGGTGGTGCCGTCTCCATCGGCCGGCCTGTCCCAGCCACGCAAG
GCAAGCAAGACGCAAGACCCCATCATCCTCCTCTCACCCTCGGCCTCATC
GCTCATCCGCATGTCCAACGTGCGCTCCTTCCTGCAGGATGGTGTCTTCA
TCCCTCCCGATCACCCTACTCTTTCCATGTCCAACTCCAATATCCTCTAC
ATCTCCCGTCCGCTGCGCATGCACTCGGACCCGTCCAGCTCCTCTCTTCG
TCCTGGCGGTGGCAGCTCCTCGCAAGTCACGTCCCGGAAACCTACACGCT
TCATCCTCGTCGATAGCACGGCCAACTTCCGTCCGGATTACTGGCAGCGT
CTGGTTGCCGTTTTCACGACGGGTCAGACCTGGCAGTTCAAGTCATACAA
GTGGTCTTCGCCACCGGAGCTCTTCAAGCATGCCACAGGTGTCTATGTCG
GATGGCGCGGAGAGGATATTCCTCGTGAAGTGAAGAGCTGGGGCAGGGGA
GTGCAGAGCTACGCGGTCGAGCGCTGGGACGAGAAGGGAGGAGCCCACGG
GGCGGGCCGGTGGCGTGATCGGGAAGTGGTCGAAGGAATCTGGACAGCGA
TCGAAGAGGGAATGAGACTGCGAGGCTGGGGATCAAAGTAGATGGCCACC
GATCCCTCCCTGCAAGATCCTCTCCTCTCGCTCCGTCGCGCCATCGCAGC
CGGCAACCTCCCCACGCCAACAACCTCCAGCGACCTCTCCGACCAAAATG
CGACCGACGACCTTGCAAAAGCCACCCATCTCTACTTCCAACATCCCCTC
CCTCAAACAATCCCCCTCACAACACCCACCCGCTTCGTCTCCAGCTCCTC
CGACTCCGCCGTCGACCTCCGCAGTATCTTCTTCGCGTGGCAGAAGAAAG
ATGTCGCCATTCCAGAGTACATTGCCTCGGCGCAGGAGCTTAACGAGTCG
CTGAAGCAAAAGGAGCGCAAGGAAGGCGAGGAAGAGGAGAAAGTTCAGAA
CTTGGTTTTCGTCGAGCGCTTGGATCTTCTGACTTGGCTGGAGGGCGCGT
CTGATGAGAGTGAATACATCAAGCCGTTGGAGGGTGCGGCTGCTGCGGCC
GCGGCTGCGGCTTCCGCTGCTGCTCAGGCGCAGGCGTCGGCGAATATTGC
TTCGGGGGCTGCTGGTGGAGTTTCTGCTGTGCCGAGTGGTGCTCCTGGGG
GTGGTGCTGCTGCTGCGCAGACTCAGCAGGGTAGGGCGGCCAAGGTCATT
GATCCTAGGTTGCAGGAGATTTATAACGGAGAGCGGAAGATGGGGGATCG
GAATAGTGTGCTACGGGGAATCAAGCCGACGGACTTCTCTCACGTCCGCA
AAACCGCCGAATCTATGCTTGGACGCAACCGCTCCCGGCCGGGACAATAC
CCTGCTGGCGTGAAAGCCGGCAGCAAGCCGCAATCCATGGTGGTGCCGTC
TCCATCGGCCGGCCTGTCCCAGCCACGCAAGGCAAGCAAGACGCAAGACC
CCATCATCCTCCTCTCACCCTCGGCCTCATCGCTCATCCGCATGTCCAAC
GTGCGCTCCTTCCTGCAGGATGGTGTCTTCATCCCTCCCGATCACCCTAC
TCTTTCCATGTCCAACTCCAATATCCTCTACATCTCCCGTCCGCTGCGCA
TGCACTCGGACCCGTCCAGCTCCTCTCTTCGTCCTGGCGGTGGCAGCTCC
TCGCAAGTCACGTCCCGGAAACCTACACGCTTCATCCTCGTCGATAGCAC
GGCCAACTTCCGTCCGGATTACTGGCAGCGTCTGGTTGCCGTTTTCACGA
CGGGTCAGACCTGGCAGTTCAAGTCATACAAGTGGTCTTCGCCACCGGAG
CTCTTCAAGCATGCCACAGGTGTCTATGTCGGATGGCGCGGAGAGGATAT
TCCTCGTGAAGTGAAGAGCTGGGGCAGGGGAGTGCAGAGCTACGCGGTCG
AGCGCTGGGACGAGAAGGGAGGAGCCCACGGGGCGGGCCGGTGGCGTGAT
CGGGAAGTGGTCGAAGGAATCTGGACAGCGATCGAAGAGGGAATGAGACT
GCGAGGCTGGGGATCAAAGTAGATGGCCACCGATCCCTCCCTGCAAGATC
CTCTCCTCTCGCTCCGTCGCGCCATCGCAGCCGGCAACCTCCCCACGCCA
ACAACCTCCAGCGACCTCTCCGACCAAAATGCGACCGACGACCTTGCAAA
AGCCACCCATCTCTACTTCCAACATCCCCTCCCTCAAACAATCCCCCTCA
CAACACCCACCCGCTTCGTCTCCAGCTCCTCCGACTCCGCCGTCGACCTC
CGCAGTATCTTCTTCGCGTGGCAGAAGAAAGATGTCGCCATTCCAGAGTA
CATTGCCTCGGCGCAGGAGCTTAACGAGTCGCTGAAGCAAAAGGAGCGCA
AGGAAGGCGAGGAAGAGGAGAAAGTTCAGAACTTGGTTTTCGTCGAGCGC
TTGGATCTTCTGACTTGGCTGGAGGGCGCGTCTGATGAGAGTGAATACAT
CAAGCCGTTGGAGGGTGCGGCTGCTGCGGCCGCGGCTGCGGCTTCCGCTG
CTGCTCAGGCGCAGGCGTCGGCGAATATTGCTTCGGGGGCTGCTGGTGGA
GTTTCTGCTGTGCCGAGTGGTGCTCCTGGGGGTGGTGCTGCTGCTGCGCA
GACTCAGCAGGGTAGGGCGGCCAAGGTCATTGATCCTAGGTTGCAGGAGA
TTTATAACGGAGAGCGGAAGATGGGGGATCGGAATAGTGTGCTACGGGGA
ATCAAGCCGACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016593Cdc73/Paf1 complex
Vocabulary: Biological Process
TermDefinition
GO:0016570histone modification
GO:0006368transcription elongation from RNA polymerase II promoter
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009749ATCC10864_009749Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009749-T1ATCC10864_009749-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009749-T1.cdsATCC10864_009749-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009749-T1.exon2ATCC10864_009749-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009749-T1.exon1ATCC10864_009749-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR038103
InterProIPR007852
InterProIPR031336
PFAMPF05179
Properties
Property NameValue
NoteBUSCO:EOG09263UWJ
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000217supercontigMCQH01000217:343395..344883 -
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