|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000222:199630..201335+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_009867-T1 ID=ATCC10864_009867-T1|Name=ATCC10864_009867-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1706bp|location=Sequence derived from alignment at MCQH01000222:199630..201335+ (Aspergillus niger ATCC 10864)
ATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCTTTTCAA
GGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGGTTCAAG
AAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTGTCCAGT
TTCCTGCCTTTCGAGTATGTGGTTCAATTTTTCCCATAGGATCACTTTCC
CGCAGGAATCTGACAACTTCCAGGAACAACAAGCAGGCTCTCAGTGAAAT
CAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCCTCG
AATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGTCTT
GCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGTTGA
CTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTGGAG
TTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGATATG
GACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGTTAA
GTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGCCATTGCTATCC
TCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGGGAA
TGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAACCA
ACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGAACG
ACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGTGTC
GCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGATCTC
CGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCAGCC
TGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATGAGC
GTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGCTCG
CTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCGCTT
CGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTGAAG
ACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTTCAT
TGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTGCCA
ACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCCTCC
ACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGACTT
CTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGGTAAGTC
AACATAGCTAGTGTGATCGCTAGGACACTAGTGAACCACAAACCCCTTTT
CTCCGTAACAATCACTGATGGTCCTTACAGAAAAACGCCATGGATGCTGT
CCTTGCTGATATGGACATTGACGGCGCTGAGAGCGATGCCGAGATGCAGG
ATGCTGATGAGAAGGCCGAGAAGAAGGACAAGAAGGAGAAGAAGGAAAAG
AAGGACAAGAAGGAAAAGAAGGAGAAGAAGGAAAAGGGCGAGAAGGAGGA
GAAGAAGAAGAAGCGCAAGTCCGACGTTGGCGAGGGCGAGTCCGAGAAGA
AGAAGCGGAAGCACGACAGCGATGCTGAGCCGTCCAAAAAGAAGAAGAAG
GTTTAA back to topCoding sequence (CDS) from alignment at MCQH01000222:199630..201335+ >ATCC10864_009867-T1 ID=ATCC10864_009867-T1|Name=ATCC10864_009867-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4680bp|location=Sequence derived from alignment at MCQH01000222:199630..201335+ (Aspergillus niger ATCC 10864)
ATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCTTTTCAA
GGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGGTTCAAG
AAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTGTCCAGT
TTCCTGCCTTTCGAGAACAACAAGCAGGCTCTCAGTGAAATCAACGATGT
CTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCCTCGAATTGAACT
TGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGTCTTGCCGACAAG
GCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGTTGACTGCGAGAC
TGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTGGAGTTAGACTGC
ACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGATATGGACACCGCT
CAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGTTAAGTTTTCCGT
TCAGCGCGATGACAACCACATCATCCAGGCCATTGCTATCCTCGACCAGC
TCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGGGAATGGTACTCC
TGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAACCAACGCTACGC
GCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGAACGACGAGAAGT
TGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGTGTCGCCCAGAGT
ATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGATCTCCGAGACCGA
CATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCAGCCTGTCCAAGT
ACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATGAGCGTTGTCGCC
CCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGCTCGCTTGATCTC
CCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCGCTTCGACGGTTC
AGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTGAAGACCAAGGGC
AACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTTCATTGGAAGAGC
TGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTGCCAACAAGTGCT
CCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCCTCCACCAAGTTC
GGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGACTTCTACGCCAC
TGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGAAAAACGCCATGGATG
CTGTCCTTGCTGATATGGACATTGACGGCGCTGAGAGCGATGCCGAGATG
CAGGATGCTGATGAGAAGGCCGAGAAGAAGGACAAGAAGGAGAAGAAGGA
AAAGAAGGACAAGAAGGAAAAGAAGGAGAAGAAGGAAAAGGGCGAGAAGG
AGGAGAAGAAGAAGAAGCGCAAGTCCGACGTTGGCGAGGGCGAGTCCGAG
AAGAAGAAGCGGAAGCACGACAGCGATGCTGAGCCGTCCAAAAAGAAGAA
GAAGGTTTAAATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACT
CGCTTTTCAAGGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAG
GAGGTTCAAGAAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGA
ACTGTCCAGTTTCCTGCCTTTCGAGAACAACAAGCAGGCTCTCAGTGAAA
TCAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCCTC
GAATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGTCT
TGCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGTTG
ACTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTGGA
GTTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGATAT
GGACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGTTA
AGTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGCCATTGCTATC
CTCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGGGA
ATGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAACC
AACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGAAC
GACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGTGT
CGCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGATCT
CCGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCAGC
CTGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATGAG
CGTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGCTC
GCTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCGCT
TCGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTGAA
GACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTTCA
TTGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTGCC
AACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCCTC
CACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGACT
TCTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGAAAAAC
GCCATGGATGCTGTCCTTGCTGATATGGACATTGACGGCGCTGAGAGCGA
TGCCGAGATGCAGGATGCTGATGAGAAGGCCGAGAAGAAGGACAAGAAGG
AGAAGAAGGAAAAGAAGGACAAGAAGGAAAAGAAGGAGAAGAAGGAAAAG
GGCGAGAAGGAGGAGAAGAAGAAGAAGCGCAAGTCCGACGTTGGCGAGGG
CGAGTCCGAGAAGAAGAAGCGGAAGCACGACAGCGATGCTGAGCCGTCCA
AAAAGAAGAAGAAGGTTTAAATGGCCGACTACCTTCTGTTCGAGGGCCCC
ATGGGCTACTCGCTTTTCAAGGTCGCCCACCAGGGTGACAGCGTTGGAAA
CCGCTTGAAGGAGGTTCAAGAAGGTGTTAACGACTTGGCCAGTTTTGGTA
AAATGGTCGAACTGTCCAGTTTCCTGCCTTTCGAGAACAACAAGCAGGCT
CTCAGTGAAATCAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGAT
CTCTTTCCTCGAATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTG
TTCTGGGTCTTGCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTC
TCTTTCGTTGACTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATAT
GCTTCGTGGAGTTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTG
AGGGTGATATGGACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGC
GCCAAGGTTAAGTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGC
CATTGCTATCCTCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGA
GAGTCAGGGAATGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTC
TCCGACAACCAACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAA
GAGCTTGAACGACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATG
ATGAGGGTGTCGCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGT
CAGGAGATCTCCGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCG
CGTTGTCAGCCTGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTT
CCAAGATGAGCGTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATC
GTTGGTGCTCGCTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAA
GTACCCCGCTTCGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCA
GAGCCTTGAAGACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCAC
TCCTCTTTCATTGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCG
CTTCCTTGCCAACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCG
AGGAGCCCTCCACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAG
CGTCTGGACTTCTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGC
CATGAAAAACGCCATGGATGCTGTCCTTGCTGATATGGACATTGACGGCG
CTGAGAGCGATGCCGAGATGCAGGATGCTGATGAGAAGGCCGAGAAGAAG
GACAAGAAGGAGAAGAAGGAAAAGAAGGACAAGAAGGAAAAGAAGGAGAA
GAAGGAAAAGGGCGAGAAGGAGGAGAAGAAGAAGAAGCGCAAGTCCGACG
TTGGCGAGGGCGAGTCCGAGAAGAAGAAGCGGAAGCACGACAGCGATGCT
GAGCCGTCCAAAAAGAAGAAGAAGGTTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR002687 |
| PFAM | PF01798 |
| InterPro | IPR036070 |
| InterPro | IPR012976 |
| InterPro | IPR012974 |
| PFAM | PF08156 |
| InterPro | IPR042239 |
Properties
| Property Name | Value |
|---|
| Product | snoRNP complex protein nop56 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000222 | supercontig | MCQH01000222:199630..201335 + |
|
