You are here

Home

ATCC10864_009876-T1, ATCC10864_009876-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009876-T1
Unique NameATCC10864_009876-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000222:225877..226552+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009876-T1 ID=ATCC10864_009876-T1|Name=ATCC10864_009876-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=676bp|location=Sequence derived from alignment at MCQH01000222:225877..226552+ (Aspergillus niger ATCC 10864)
ATGGCGGACGCACAGAAGCAAATGCAGGCGCTTACGGAAGAGTTCCAGAC
GTTGCAGACTGGTATGTTGCTATTCTCGACTTGTTTGCTTCCCATTTGAG
GGGGGGCATGCAAGCGTCATCTATCTATTCTGTCTCCGTCAACCGGACTA
TCTTGACATGATGCTATGCGCACCATTACTTGAAAGCATGAAACAAATAC
TAATACTTGATTGTAATAGAGCTCGACGGTCTAGTCGAAGCGCGCCAGAA
GCTCGAATCCCAGCAGCAGGAGAACGTCGGCGTTCAGAAGGAGTTCAATT
CCCTTGATGACGAGTCGAACATCTACAAGTTGATCGGACCGGTTCTGCTG
AAGCAGGATAAAAATGAGGCTATGATGGCTGTCAATGGACGTCTTGAGTT
CATTGAGAAGGAAATGTGCGTATCAGTTACCCTCCTCTCTCCCACCCCTA
ATTGGGTGTTGAAGTGAGAGCTGTGACTGACATGATCTATCTATAGCAAG
CGCATTGAGGGACAGATTCAGGAGAACCAGGACAAGGCTGACAAGAAGCG
CGCTGAGGTGAGTTTTATGGTCATTGTAGTAGGCATGCTATCGGTAATCG
GGACTGACAATTCGTGATACAGATCGTTCAGTTCCAGACTCAGATGCAAC
AAGCGGCGGCGGCTGCTTCTGCTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000222:225877..226552+

>ATCC10864_009876-T1 ID=ATCC10864_009876-T1|Name=ATCC10864_009876-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1488bp|location=Sequence derived from alignment at MCQH01000222:225877..226552+ (Aspergillus niger ATCC 10864)
ATGGCGGACGCACAGAAGCAAATGCAGGCGCTTACGGAAGAGTTCCAGAC
GTTGCAGACTGAGCTCGACGGTCTAGTCGAAGCGCGCCAGAAGCTCGAAT
CCCAGCAGCAGGAGAACGTCGGCGTTCAGAAGGAGTTCAATTCCCTTGAT
GACGAGTCGAACATCTACAAGTTGATCGGACCGGTTCTGCTGAAGCAGGA
TAAAAATGAGGCTATGATGGCTGTCAATGGACGTCTTGAGTTCATTGAGA
AGGAAATCAAGCGCATTGAGGGACAGATTCAGGAGAACCAGGACAAGGCT
GACAAGAAGCGCGCTGAGATCGTTCAGTTCCAGACTCAGATGCAACAAGC
GGCGGCGGCTGCTTCTGCTTGAATGGCGGACGCACAGAAGCAAATGCAGG
CGCTTACGGAAGAGTTCCAGACGTTGCAGACTGAGCTCGACGGTCTAGTC
GAAGCGCGCCAGAAGCTCGAATCCCAGCAGCAGGAGAACGTCGGCGTTCA
GAAGGAGTTCAATTCCCTTGATGACGAGTCGAACATCTACAAGTTGATCG
GACCGGTTCTGCTGAAGCAGGATAAAAATGAGGCTATGATGGCTGTCAAT
GGACGTCTTGAGTTCATTGAGAAGGAAATCAAGCGCATTGAGGGACAGAT
TCAGGAGAACCAGGACAAGGCTGACAAGAAGCGCGCTGAGATCGTTCAGT
TCCAGACTCAGATGCAACAAGCGGCGGCGGCTGCTTCTGCTTGAATGGCG
GACGCACAGAAGCAAATGCAGGCGCTTACGGAAGAGTTCCAGACGTTGCA
GACTGAGCTCGACGGTCTAGTCGAAGCGCGCCAGAAGCTCGAATCCCAGC
AGCAGGAGAACGTCGGCGTTCAGAAGGAGTTCAATTCCCTTGATGACGAG
TCGAACATCTACAAGTTGATCGGACCGGTTCTGCTGAAGCAGGATAAAAA
TGAGGCTATGATGGCTGTCAATGGACGTCTTGAGTTCATTGAGAAGGAAA
TCAAGCGCATTGAGGGACAGATTCAGGAGAACCAGGACAAGGCTGACAAG
AAGCGCGCTGAGATCGTTCAGTTCCAGACTCAGATGCAACAAGCGGCGGC
GGCTGCTTCTGCTTGAATGGCGGACGCACAGAAGCAAATGCAGGCGCTTA
CGGAAGAGTTCCAGACGTTGCAGACTGAGCTCGACGGTCTAGTCGAAGCG
CGCCAGAAGCTCGAATCCCAGCAGCAGGAGAACGTCGGCGTTCAGAAGGA
GTTCAATTCCCTTGATGACGAGTCGAACATCTACAAGTTGATCGGACCGG
TTCTGCTGAAGCAGGATAAAAATGAGGCTATGATGGCTGTCAATGGACGT
CTTGAGTTCATTGAGAAGGAAATCAAGCGCATTGAGGGACAGATTCAGGA
GAACCAGGACAAGGCTGACAAGAAGCGCGCTGAGATCGTTCAGTTCCAGA
CTCAGATGCAACAAGCGGCGGCGGCTGCTTCTGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009876ATCC10864_009876Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009876-T1.exon1ATCC10864_009876-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009876-T1.exon2ATCC10864_009876-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009876-T1.exon3ATCC10864_009876-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009876-T1.exon4ATCC10864_009876-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009876-T1.cdsATCC10864_009876-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009876-T1ATCC10864_009876-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01920
InterProIPR002777
InterProIPR009053
Properties
Property NameValue
NoteBUSCO:EOG09265E8A
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000222supercontigMCQH01000222:225877..226552 +
Powered by Drupal