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ATCC10864_009898-T1, ATCC10864_009898-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009898-T1
Unique NameATCC10864_009898-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000222:281662..282931-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009898-T1 ID=ATCC10864_009898-T1|Name=ATCC10864_009898-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1270bp|location=Sequence derived from alignment at MCQH01000222:281662..282931- (Aspergillus niger ATCC 10864)
ATGAAGAGCATCACAATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCT
GCTCTATGCAGTGAACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCG
CCGGGATCGACACCAAGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCC
AACCTGGGCAACATCGTTGCTCATGACCCTAATGTCATTCAGCATGATGG
CTATTTCTACTTGTACAAAGGTGGTGTGCACATTCCGATTCACAGAGCCC
GCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCGTCCTGGACGACTCC
AGCGTGATCCCGAAACAGAACCGCTCTCGTCCTTGGGCCCCTACGACCAT
TCAGCACGACAACCATTTCTACTGCTTCTACGCGATCAGCGAGAACGGCA
GTCGCGACAGCGCCATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGA
AACTGGACGGACCATGGCGCTGTCGTCAACACCGGCAAGGGAGACCTGTC
GGACATCTATCCTTACTCGGTATCCAATGCGATAGACGGCGCATTCATCA
CCGATCAACAGACCGGACAGTCTCACCTGCTTTACGGGAGCTATTGGCAT
GGTATTTTCTCGGTGCCATTGGCTGATGATCTCCTTTCCGTCAAAACCCC
GAAGACCCCAAACGCGACCAACCTGGCCTACATCCCAGATGCCAAGTCCA
AGCCTATCGAGGGCTCTTTCATGACTTACAAGGCGCCTTACTACTACCTG
TGGTTCAGTCACGGCAAATGTTGTCACTTTGATATTCACGCTTTTCCGCC
CATGGGAGACGAGTACGTGCACATGATCTTCTATTCGAGAACTTGGTAGC
TAACATTTACAACAGGTACAACATCCGGGTCGGTAGATCTAAGAGTGCGA
CAGGTCCTTTCGTGGATAAGGATGGCCATGATACCCTCAAGGGCGGTGGT
ACCATCGTCTACGGCTCCAACCATGGAATTGTCTATGCCCCTGGTGGAGT
GGGCGTGTTGATCAACAATGGCAGCGAAGCCGATGTCTTGTATTACCATT
ATCGTACGTTTACAGTCCACTGTTGTGGGGAAGTCAGCTAACAGAGCTTG
CAGTCAACACTACGTCTGGTTTCGCACAGGGAGTGAGTCTAGCCTTAACT
ATCCATTGACAGGATGATACTAACGCAATACAGGACGCGCACTTGGGATG
GAACTATCTGCACTATGTAAATGGATGGCCAGTGGCTGTCGAGGGGTATG
TGAATGCCAACGGCAAATAA
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Coding sequence (CDS) from alignment at MCQH01000222:281662..282931-

>ATCC10864_009898-T1 ID=ATCC10864_009898-T1|Name=ATCC10864_009898-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4464bp|location=Sequence derived from alignment at MCQH01000222:281662..282931- (Aspergillus niger ATCC 10864)
GACGCGCACTTGGGATGGAACTATCTGCACTATGTAAATGGATGGCCAGT
GGCTGTCGAGGGGTATGTGAATGCCAACGGCAAATAATCAACACTACGTC
TGGTTTCGCACAGGGAGTACAACATCCGGGTCGGTAGATCTAAGAGTGCG
ACAGGTCCTTTCGTGGATAAGGATGGCCATGATACCCTCAAGGGCGGTGG
TACCATCGTCTACGGCTCCAACCATGGAATTGTCTATGCCCCTGGTGGAG
TGGGCGTGTTGATCAACAATGGCAGCGAAGCCGATGTCTTGTATTACCAT
TATCATGAAGAGCATCACAATGCTGCCATCCCTGCTTTCCGTTTTATTCT
TCCTGCTCTATGCAGTGAACGCTGTTCCACTGGCGCCCCGGGCGAGTGCA
CTCGCCGGGATCGACACCAAGTCCTTCTCTAAGACCAAAGATTATCCCCT
TCCCAACCTGGGCAACATCGTTGCTCATGACCCTAATGTCATTCAGCATG
ATGGCTATTTCTACTTGTACAAAGGTGGTGTGCACATTCCGATTCACAGA
GCCCGCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCGTCCTGGACGA
CTCCAGCGTGATCCCGAAACAGAACCGCTCTCGTCCTTGGGCCCCTACGA
CCATTCAGCACGACAACCATTTCTACTGCTTCTACGCGATCAGCGAGAAC
GGCAGTCGCGACAGCGCCATTGGAGTCGCCTCTTCGGATACTCCCGTCGG
TGGAAACTGGACGGACCATGGCGCTGTCGTCAACACCGGCAAGGGAGACC
TGTCGGACATCTATCCTTACTCGGTATCCAATGCGATAGACGGCGCATTC
ATCACCGATCAACAGACCGGACAGTCTCACCTGCTTTACGGGAGCTATTG
GCATGGTATTTTCTCGGTGCCATTGGCTGATGATCTCCTTTCCGTCAAAA
CCCCGAAGACCCCAAACGCGACCAACCTGGCCTACATCCCAGATGCCAAG
TCCAAGCCTATCGAGGGCTCTTTCATGACTTACAAGGCGCCTTACTACTA
CCTGTGGTTCAGTCACGGCAAATGTTGTCACTTTGATATTCACGCTTTTC
CGCCCATGGGAGACGAGACGCGCACTTGGGATGGAACTATCTGCACTATG
TAAATGGATGGCCAGTGGCTGTCGAGGGGTATGTGAATGCCAACGGCAAA
TAATCAACACTACGTCTGGTTTCGCACAGGGAGTACAACATCCGGGTCGG
TAGATCTAAGAGTGCGACAGGTCCTTTCGTGGATAAGGATGGCCATGATA
CCCTCAAGGGCGGTGGTACCATCGTCTACGGCTCCAACCATGGAATTGTC
TATGCCCCTGGTGGAGTGGGCGTGTTGATCAACAATGGCAGCGAAGCCGA
TGTCTTGTATTACCATTATCATGAAGAGCATCACAATGCTGCCATCCCTG
CTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAACGCTGTTCCACTGGC
GCCCCGGGCGAGTGCACTCGCCGGGATCGACACCAAGTCCTTCTCTAAGA
CCAAAGATTATCCCCTTCCCAACCTGGGCAACATCGTTGCTCATGACCCT
AATGTCATTCAGCATGATGGCTATTTCTACTTGTACAAAGGTGGTGTGCA
CATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGCCTTGGGAACAGGTCG
GGACCGTCCTGGACGACTCCAGCGTGATCCCGAAACAGAACCGCTCTCGT
CCTTGGGCCCCTACGACCATTCAGCACGACAACCATTTCTACTGCTTCTA
CGCGATCAGCGAGAACGGCAGTCGCGACAGCGCCATTGGAGTCGCCTCTT
CGGATACTCCCGTCGGTGGAAACTGGACGGACCATGGCGCTGTCGTCAAC
ACCGGCAAGGGAGACCTGTCGGACATCTATCCTTACTCGGTATCCAATGC
GATAGACGGCGCATTCATCACCGATCAACAGACCGGACAGTCTCACCTGC
TTTACGGGAGCTATTGGCATGGTATTTTCTCGGTGCCATTGGCTGATGAT
CTCCTTTCCGTCAAAACCCCGAAGACCCCAAACGCGACCAACCTGGCCTA
CATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCTCTTTCATGACTTACA
AGGCGCCTTACTACTACCTGTGGTTCAGTCACGGCAAATGTTGTCACTTT
GATATTCACGCTTTTCCGCCCATGGGAGACGAGACGCGCACTTGGGATGG
AACTATCTGCACTATGTAAATGGATGGCCAGTGGCTGTCGAGGGGTATGT
GAATGCCAACGGCAAATAATCAACACTACGTCTGGTTTCGCACAGGGAGT
ACAACATCCGGGTCGGTAGATCTAAGAGTGCGACAGGTCCTTTCGTGGAT
AAGGATGGCCATGATACCCTCAAGGGCGGTGGTACCATCGTCTACGGCTC
CAACCATGGAATTGTCTATGCCCCTGGTGGAGTGGGCGTGTTGATCAACA
ATGGCAGCGAAGCCGATGTCTTGTATTACCATTATCATGAAGAGCATCAC
AATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGA
ACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACC
AAGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACAT
CGTTGCTCATGACCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGT
ACAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGG
CCTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATCCCGAA
ACAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACC
ATTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGTCGCGACAGCGCC
ATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCA
TGGCGCTGTCGTCAACACCGGCAAGGGAGACCTGTCGGACATCTATCCTT
ACTCGGTATCCAATGCGATAGACGGCGCATTCATCACCGATCAACAGACC
GGACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGGTATTTTCTCGGT
GCCATTGGCTGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCAAACG
CGACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGC
TCTTTCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGG
CAAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGA
CGCGCACTTGGGATGGAACTATCTGCACTATGTAAATGGATGGCCAGTGG
CTGTCGAGGGGTATGTGAATGCCAACGGCAAATAATCAACACTACGTCTG
GTTTCGCACAGGGAGTACAACATCCGGGTCGGTAGATCTAAGAGTGCGAC
AGGTCCTTTCGTGGATAAGGATGGCCATGATACCCTCAAGGGCGGTGGTA
CCATCGTCTACGGCTCCAACCATGGAATTGTCTATGCCCCTGGTGGAGTG
GGCGTGTTGATCAACAATGGCAGCGAAGCCGATGTCTTGTATTACCATTA
TCATGAAGAGCATCACAATGCTGCCATCCCTGCTTTCCGTTTTATTCTTC
CTGCTCTATGCAGTGAACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACT
CGCCGGGATCGACACCAAGTCCTTCTCTAAGACCAAAGATTATCCCCTTC
CCAACCTGGGCAACATCGTTGCTCATGACCCTAATGTCATTCAGCATGAT
GGCTATTTCTACTTGTACAAAGGTGGTGTGCACATTCCGATTCACAGAGC
CCGCTCCCTCAGTGGGCCTTGGGAACAGGTCGGGACCGTCCTGGACGACT
CCAGCGTGATCCCGAAACAGAACCGCTCTCGTCCTTGGGCCCCTACGACC
ATTCAGCACGACAACCATTTCTACTGCTTCTACGCGATCAGCGAGAACGG
CAGTCGCGACAGCGCCATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTG
GAAACTGGACGGACCATGGCGCTGTCGTCAACACCGGCAAGGGAGACCTG
TCGGACATCTATCCTTACTCGGTATCCAATGCGATAGACGGCGCATTCAT
CACCGATCAACAGACCGGACAGTCTCACCTGCTTTACGGGAGCTATTGGC
ATGGTATTTTCTCGGTGCCATTGGCTGATGATCTCCTTTCCGTCAAAACC
CCGAAGACCCCAAACGCGACCAACCTGGCCTACATCCCAGATGCCAAGTC
CAAGCCTATCGAGGGCTCTTTCATGACTTACAAGGCGCCTTACTACTACC
TGTGGTTCAGTCACGGCAAATGTTGTCACTTTGATATTCACGCTTTTCCG
CCCATGGGAGACGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009898ATCC10864_009898Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009898-T1ATCC10864_009898-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009898-T1.cdsATCC10864_009898-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009898-T1.exon4ATCC10864_009898-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009898-T1.exon3ATCC10864_009898-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009898-T1.exon2ATCC10864_009898-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009898-T1.exon1ATCC10864_009898-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR023296
PFAMPF04616
InterProIPR016840
InterProIPR006710
Properties
Property NameValue
NoteCAZy:GH43
NoteSECRETED:SignalP(1-23)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000222supercontigMCQH01000222:281662..282931 -
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