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ATCC10864_009917-T1, ATCC10864_009917-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009917-T1
Unique NameATCC10864_009917-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000226:28721..30859+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009917-T1 ID=ATCC10864_009917-T1|Name=ATCC10864_009917-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2139bp|location=Sequence derived from alignment at MCQH01000226:28721..30859+ (Aspergillus niger ATCC 10864)
ATGTCAGGCGTGTACCGCGCCATGAAGAACCTCGTTCCCGATCACTCTGA
AGCTCTTTCTGAAGTCCAAACCCATGAACCGATTACTTCGTTCAAATCAG
GGTTGACGACTCCCTGGATTTTCCTCCAACCCACGACTGAGTTGAAAACT
ACTATCACTGGCTCTGTGAAGTACTATTTAGATTCGTTGGCTTCGTCGGT
CGGCGATTCCCAATGTGCACGCCAACGCAGGAATAGAAAGCGCAAAAGGT
CCGAAGTTGAGGAAAGTTCTACAAGCCAGGCCCTGCAGCTCAAGCAACTT
TATGTCGATGGCTTTACTTCTGACCAGATATGGCAACAAGCCCTGAGAAT
CCTTGATTCTTCAGGTGGTGAGGTTGAGCGGGATTTTACTTGGTGGTCTG
CAGTGTCCAAACCATACGACCCGCCCCTGACCTCAACTTATGATTTGGCT
CTTGATGACGCCGAATTAGAGGGCAGCAACCTCGACTCTCAGTCAGAGAC
CGATCTTACCCGATCGAGTATCGATGATGACGACCTTAGTTCAGTACACG
ATCACTCTGAAACCTCCCCCCACGATGATTCAGACGTCGAAGAAGACATT
GAAAAATTATCCGACAATATTCCCGGAAACGACATCGACGAAGGTGAACA
AGAAACGTATGTGGAGGATCCCTTCGGCTTGAATGATGGTTTCTTCTCGA
TAGATGATTTCAACAAGCAATCGGAACTACTCGAAAGACAAGACGTTAGT
GGTGGTCCAGACAATGATTTTGAGAGCGAGGATGATGAAATCGATTGGCA
CGCAAATCCTCTTAGTACGACAGGGTCAATGTCTTTATCGAAGGGAGACA
TGCCACAGGAGAACTCTGACGGGAATGGTGACGAGAATATGTCTGACAGT
GAAGAGGAGGGACCAACATTTGGGGATGCAGGCCTTGAGGACGATTCCGA
TATGGACGAAGATAATGTCTATGCCACAAACTCCGGAGGCGAAGGTTGGA
TAAACACTAGCGACATAAAGTATTCTGACTTCTTCGCGCCTCCTCCGCGT
AAAGTTACTCGCAAAAAGTCTCGCTCCCTTCCCAAAACTCAGCCTGATAT
TGCTATTACCAACGACGACGTTGATCGTGCCATGGCTGATGTTCGCCGTG
ATCTCTTTGAAGACGAACCTTCCGGTGAAGACAGTGATGAACATGAAGTA
GCGCGAGGATCTCAGATCAATTATTCTAGTCATGAGAAGCAGCGTGCTCG
CATTGCTGATGAGATTCGCCGTTTGGAGGCTGCAAACGTTGCCAAGAAGG
ATTGGATGCTAGCTGGTGAAGCCAGGGCTGTCGAAAGGCCTGTGAACTCG
CTTATTGAAGAAGACCTGGATTTCGAAAGAATCGGAAAGCCCGTGCCAGT
CGTCACAGCAGAGATGTCAGAGGATATTGAAGAGCTTATCAAGCGTCGGA
TTCTCGCCAAACAATTTGACGAAGTAATACGACGTCGCCCTGGTGTTTCC
GACGCACTGAGCGCACGGGGAAGCCGTCCTGAATTGGAAGATACCAAACC
CCAGCAGAGTCTTGCTGAATTATATGAGGCCGACCATCTTCGTGCTACTG
ATCCAAACTTCGTTGACCCTAAAAATCAGAAGTTGATCCGCGAGCATGCT
ACTGTGACAAGTTTATGGAAAGAGATCAGCTCTCAATTAGACACGCTCTC
AAACTGGCATTACAAGCCCAAGGCTCCGCAGGCAAGCATCAATGTTGTCA
CCGATGTGGCAACAATTACTATGGAGGATGCTCAGCCGACAGCCAGCAAC
GCTGTCAATGGGACGGCAACCCTTGCGCCGCAGGAGATCTACGCACCTGG
CGACGATAACAAAGTCGCTGGTGAAATGATTTTGAAGAATGGAACGGCAA
TCGCCAAAGAGGAAATGACCCGGGAACAAAAGGCTAAGTTGAGGCGAGAG
CACAAGAAGCAAATCGCTAGCACCGCAAAATCTCAGAAGACAGGGAAAGC
GGCTGAGAAACAGCAGCTCATGTCGGACTTGAAGAAGGGTGGAGTCAAAT
TGATTGGAAAGCAGGGCGAAGTGACGAATATCAATGGCGGTAAAATCAAA
GAAGGTGTGAAGGAAGGTGGCCATGTGCTCAAGCTTTAG
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Coding sequence (CDS) from alignment at MCQH01000226:28721..30859+

>ATCC10864_009917-T1 ID=ATCC10864_009917-T1|Name=ATCC10864_009917-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2139bp|location=Sequence derived from alignment at MCQH01000226:28721..30859+ (Aspergillus niger ATCC 10864)
ATGTCAGGCGTGTACCGCGCCATGAAGAACCTCGTTCCCGATCACTCTGA
AGCTCTTTCTGAAGTCCAAACCCATGAACCGATTACTTCGTTCAAATCAG
GGTTGACGACTCCCTGGATTTTCCTCCAACCCACGACTGAGTTGAAAACT
ACTATCACTGGCTCTGTGAAGTACTATTTAGATTCGTTGGCTTCGTCGGT
CGGCGATTCCCAATGTGCACGCCAACGCAGGAATAGAAAGCGCAAAAGGT
CCGAAGTTGAGGAAAGTTCTACAAGCCAGGCCCTGCAGCTCAAGCAACTT
TATGTCGATGGCTTTACTTCTGACCAGATATGGCAACAAGCCCTGAGAAT
CCTTGATTCTTCAGGTGGTGAGGTTGAGCGGGATTTTACTTGGTGGTCTG
CAGTGTCCAAACCATACGACCCGCCCCTGACCTCAACTTATGATTTGGCT
CTTGATGACGCCGAATTAGAGGGCAGCAACCTCGACTCTCAGTCAGAGAC
CGATCTTACCCGATCGAGTATCGATGATGACGACCTTAGTTCAGTACACG
ATCACTCTGAAACCTCCCCCCACGATGATTCAGACGTCGAAGAAGACATT
GAAAAATTATCCGACAATATTCCCGGAAACGACATCGACGAAGGTGAACA
AGAAACGTATGTGGAGGATCCCTTCGGCTTGAATGATGGTTTCTTCTCGA
TAGATGATTTCAACAAGCAATCGGAACTACTCGAAAGACAAGACGTTAGT
GGTGGTCCAGACAATGATTTTGAGAGCGAGGATGATGAAATCGATTGGCA
CGCAAATCCTCTTAGTACGACAGGGTCAATGTCTTTATCGAAGGGAGACA
TGCCACAGGAGAACTCTGACGGGAATGGTGACGAGAATATGTCTGACAGT
GAAGAGGAGGGACCAACATTTGGGGATGCAGGCCTTGAGGACGATTCCGA
TATGGACGAAGATAATGTCTATGCCACAAACTCCGGAGGCGAAGGTTGGA
TAAACACTAGCGACATAAAGTATTCTGACTTCTTCGCGCCTCCTCCGCGT
AAAGTTACTCGCAAAAAGTCTCGCTCCCTTCCCAAAACTCAGCCTGATAT
TGCTATTACCAACGACGACGTTGATCGTGCCATGGCTGATGTTCGCCGTG
ATCTCTTTGAAGACGAACCTTCCGGTGAAGACAGTGATGAACATGAAGTA
GCGCGAGGATCTCAGATCAATTATTCTAGTCATGAGAAGCAGCGTGCTCG
CATTGCTGATGAGATTCGCCGTTTGGAGGCTGCAAACGTTGCCAAGAAGG
ATTGGATGCTAGCTGGTGAAGCCAGGGCTGTCGAAAGGCCTGTGAACTCG
CTTATTGAAGAAGACCTGGATTTCGAAAGAATCGGAAAGCCCGTGCCAGT
CGTCACAGCAGAGATGTCAGAGGATATTGAAGAGCTTATCAAGCGTCGGA
TTCTCGCCAAACAATTTGACGAAGTAATACGACGTCGCCCTGGTGTTTCC
GACGCACTGAGCGCACGGGGAAGCCGTCCTGAATTGGAAGATACCAAACC
CCAGCAGAGTCTTGCTGAATTATATGAGGCCGACCATCTTCGTGCTACTG
ATCCAAACTTCGTTGACCCTAAAAATCAGAAGTTGATCCGCGAGCATGCT
ACTGTGACAAGTTTATGGAAAGAGATCAGCTCTCAATTAGACACGCTCTC
AAACTGGCATTACAAGCCCAAGGCTCCGCAGGCAAGCATCAATGTTGTCA
CCGATGTGGCAACAATTACTATGGAGGATGCTCAGCCGACAGCCAGCAAC
GCTGTCAATGGGACGGCAACCCTTGCGCCGCAGGAGATCTACGCACCTGG
CGACGATAACAAAGTCGCTGGTGAAATGATTTTGAAGAATGGAACGGCAA
TCGCCAAAGAGGAAATGACCCGGGAACAAAAGGCTAAGTTGAGGCGAGAG
CACAAGAAGCAAATCGCTAGCACCGCAAAATCTCAGAAGACAGGGAAAGC
GGCTGAGAAACAGCAGCTCATGTCGGACTTGAAGAAGGGTGGAGTCAAAT
TGATTGGAAAGCAGGGCGAAGTGACGAATATCAATGGCGGTAAAATCAAA
GAAGGTGTGAAGGAAGGTGGCCATGTGCTCAAGCTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0034457Mpp10 complex
GO:0005732small nucleolar ribonucleoprotein complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009917ATCC10864_009917Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009917-T1.exon1ATCC10864_009917-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009917-T1.cdsATCC10864_009917-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009917-T1ATCC10864_009917-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012173
PFAMPF04006
Properties
Property NameValue
NoteBUSCO:EOG09263ROQ
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000226supercontigMCQH01000226:28721..30859 +
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