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ATCC10864_010021-T1, ATCC10864_010021-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010021-T1
Unique NameATCC10864_010021-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:212350..213688-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010021-T1 ID=ATCC10864_010021-T1|Name=ATCC10864_010021-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1339bp|location=Sequence derived from alignment at MCQH01000231:212350..213688- (Aspergillus niger ATCC 10864)
ATGGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGT
GCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTG
ACGTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCC
GAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTA
CCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACC
TGAATGATGGAACCCACGTACGTTCCCCGGGTGATTCATGTCTTATTCTC
ACACCCAATCGCGTCAATAGTACTGGCTGACAGATGTACTAGGTGATCTT
CCAGGGAGAAACCACTTTTGGATACGAGGAATGGGAAGGGCCTCTTGTGC
GTGTTTCTGGAACTGATATCACGGTCGAGGGGGAGAGCGACGCGGTGCTC
AATGGCGATGGCAGCCGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAA
AACAAAGCCCAAGTTCTTCTATGCCCATGACTTGACCTCTTCCACCATCA
AGAGCATCTACATCGAGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGC
TCCACTGATCTTACCATGACTGATATCACGGTGGATAACACGGATGGTGA
CACGGACGACCTCGCCGCCAATACGGATGGCTTCGACATCGGGGAAAGCA
CCTATATCACGATCACAGGTGCCGAAATCTACAACCAAGATGACTGCGTT
GCCATCAATTCTGGAGAGGTATGCGTCCCCTGGCACTGATTGAGAGGAGA
GGCGCCTTGCTGACGATCTGGTAGAACATTTATTTCAGTGCCAGTGTGTG
TTCTGGTGGTCACGGCCTGTCTATTGGCTCTGTTGGTGGTCGGGATGATA
ACACTGTCAAGAACGTGACGTTTTATGATGTCAATGTTCTCAAGTCCCAG
CAAGGTAAGGGAAAGCATTTGAACCATCCGTTTGCCGTCCTCTAACGTAT
GCTTTAGCAATCCGTATCAAGACCATCTACGGCGACACTGGCTCCGTCAG
CGAAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGATTACGGCA
TTGTCATTGAGCAGAACTATGATGACACCTCCAAGACCCCTACTACCGGG
GTACCGATCGCGGATTTTGTGCTCGAGAACATCGTTGGAACGTGTGAAGA
TGATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAGCTGCTCGG
ATTGGACTTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCAGTGACGAC
TGCCTTAATGTTCCCTCCGGGATTAGCTGCGATTTGTAG
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Coding sequence (CDS) from alignment at MCQH01000231:212350..213688-

>ATCC10864_010021-T1 ID=ATCC10864_010021-T1|Name=ATCC10864_010021-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4620bp|location=Sequence derived from alignment at MCQH01000231:212350..213688- (Aspergillus niger ATCC 10864)
CAATCCGTATCAAGACCATCTACGGCGACACTGGCTCCGTCAGCGAAGTC
ACTTACCATGAGATTGCCTTTTCGGACGCTACTGATTACGGCATTGTCAT
TGAGCAGAACTATGATGACACCTCCAAGACCCCTACTACCGGGGTACCGA
TCGCGGATTTTGTGCTCGAGAACATCGTTGGAACGTGTGAAGATGATGAT
TGTACCGAAGTATACATTGCCTGCGGTGATGGCAGCTGCTCGGATTGGAC
TTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCAGTGACGACTGCCTTA
ATGTTCCCTCCGGGATTAGCTGCGATTTGTAGAACATTTATTTCAGTGCC
AGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTGGCTCTGTTGGTGGTCG
GGATGATAACACTGTCAAGAACGTGACGTTTTATGATGTCAATGTTCTCA
AGTCCCAGCAAGGTGATCTTCCAGGGAGAAACCACTTTTGGATACGAGGA
ATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTGATATCACGGTCGAGG
GGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGGATGGA
GAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTTCTTCTATGCCCATGA
CTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCCTGTGC
AGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATATCACG
GTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACGGATGG
CTTCGACATCGGGGAAAGCACCTATATCACGATCACAGGTGCCGAAATCT
ACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGATGGTCCGTCAG
CTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGTGCGCGCGGCGCC
TGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTGACGTCAATTTGG
TTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCCGAAGGTGCATCC
AAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTACCTGTCCGACGT
GGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACCTGAATGATGGAA
CCCACCAATCCGTATCAAGACCATCTACGGCGACACTGGCTCCGTCAGCG
AAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGATTACGGCATT
GTCATTGAGCAGAACTATGATGACACCTCCAAGACCCCTACTACCGGGGT
ACCGATCGCGGATTTTGTGCTCGAGAACATCGTTGGAACGTGTGAAGATG
ATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAGCTGCTCGGAT
TGGACTTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCAGTGACGACTG
CCTTAATGTTCCCTCCGGGATTAGCTGCGATTTGTAGAACATTTATTTCA
GTGCCAGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTGGCTCTGTTGGT
GGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATGATGTCAATGT
TCTCAAGTCCCAGCAAGGTGATCTTCCAGGGAGAAACCACTTTTGGATAC
GAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTGATATCACGGT
CGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGG
ATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTTCTTCTATGCC
CATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCC
TGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATA
TCACGGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACG
GATGGCTTCGACATCGGGGAAAGCACCTATATCACGATCACAGGTGCCGA
AATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGATGGTCC
GTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGTGCGCGCG
GCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTGACGTCAA
TTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCCGAAGGTG
CATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTACCTGTCC
GACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACCTGAATGA
TGGAACCCACCAATCCGTATCAAGACCATCTACGGCGACACTGGCTCCGT
CAGCGAAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGATTACG
GCATTGTCATTGAGCAGAACTATGATGACACCTCCAAGACCCCTACTACC
GGGGTACCGATCGCGGATTTTGTGCTCGAGAACATCGTTGGAACGTGTGA
AGATGATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAGCTGCT
CGGATTGGACTTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCAGTGAC
GACTGCCTTAATGTTCCCTCCGGGATTAGCTGCGATTTGTAGAACATTTA
TTTCAGTGCCAGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTGGCTCTG
TTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATGATGTC
AATGTTCTCAAGTCCCAGCAAGGTGATCTTCCAGGGAGAAACCACTTTTG
GATACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTGATATC
ACGGTCGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTG
GTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTTCTTCT
ATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAAC
TCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGAC
TGATATCACGGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCA
ATACGGATGGCTTCGACATCGGGGAAAGCACCTATATCACGATCACAGGT
GCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGAT
GGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGTGC
GCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTGAC
GTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCCGA
AGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTACC
TGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACCTG
AATGATGGAACCCACCAATCCGTATCAAGACCATCTACGGCGACACTGGC
TCCGTCAGCGAAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGA
TTACGGCATTGTCATTGAGCAGAACTATGATGACACCTCCAAGACCCCTA
CTACCGGGGTACCGATCGCGGATTTTGTGCTCGAGAACATCGTTGGAACG
TGTGAAGATGATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAG
CTGCTCGGATTGGACTTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCA
GTGACGACTGCCTTAATGTTCCCTCCGGGATTAGCTGCGATTTGTAGAAC
ATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTGG
CTCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATG
ATGTCAATGTTCTCAAGTCCCAGCAAGGTGATCTTCCAGGGAGAAACCAC
TTTTGGATACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTG
ATATCACGGTCGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGC
CGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTT
CTTCTATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCG
AGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACC
ATGACTGATATCACGGTGGATAACACGGATGGTGACACGGACGACCTCGC
CGCCAATACGGATGGCTTCGACATCGGGGAAAGCACCTATATCACGATCA
CAGGTGCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGA
GAGATGGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGC
TGTGCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGC
CTGACGTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGC
TCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAAT
CTACCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTG
ACCTGAATGATGGAACCCAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010021ATCC10864_010021Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010021-T1ATCC10864_010021-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010021-T1.cdsATCC10864_010021-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010021-T1.exon4ATCC10864_010021-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_010021-T1.exon3ATCC10864_010021-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010021-T1.exon2ATCC10864_010021-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010021-T1.exon1ATCC10864_010021-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR006626
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:212350..213688 -
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