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ATCC10864_010122-T1, ATCC10864_010122-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010122-T1
Unique NameATCC10864_010122-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:633515..635565+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010122-T1 ID=ATCC10864_010122-T1|Name=ATCC10864_010122-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2051bp|location=Sequence derived from alignment at MCQH01000231:633515..635565+ (Aspergillus niger ATCC 10864)
ATGGCTTTTTACGACGACCCTGGGAACGATTCCCAGCCATTTGGGAGGCC
CCCTAAATCCTACGAAGGAGGGATTGCTGGGCCGCGACGACCGAGTACGT
GTGATCCGATCCTTTGTCCCGATGCGTTCACATTTGTTTACCCCTCTACC
TTCGTTTTTCTTTCGGCGAAGTTAACCGTCGCTTGTAGGACTCGTGACGG
ACTATGGATCATCAATGGTGCAATGGATACGCACACGGAAACCCCGCTAT
AAAGGAGGTCATCAGATTGAGGTGGAAAGGCCTAGTGCAAGCTATGTTGT
GGATGTAAGTGCGACAGATTTCCGCGCACATTCTGATACAACTCTTCGAT
TAACACGAGCGGAATTTTCTTTGTTAGATGCTCCCCCCTCTTGCACGAGT
CCATTCTCCGGCGGATACTATACCAGTGCGGCATTTACATCAGTCGATTG
GAAAATCGAAGAAACCGATCACTGTCGTACGATGGACACCGGAAGGAAGA
CGCCTGCTAACGGGAGGCCACACGGGCGAATTCATGCTATGGAATGGAAC
TGCCTTCAACTTCGAAACTGTCATGGATGTGGGTGTCGCTCGGATACATT
AATTCCCTAGCCGAAGATTTTTGTTGCTGATGGTTGAATAGGCACATTAT
GATCAGCTACAAGCTGGAGTAACCTCCTTAGCTTGGTCCCACAGTCATGA
CTGGTTAATATCCGGAGGACAGAAGGGTGACGTGAAGTATTGGCGACCTA
ACTTTAACAACGTCGAGACGATCGATGACGCACATCACGATGCTGTACGC
GATTTGGCATGGTCACCAAGTGATACTAAATTCCTCTCCGCATCCGACGA
CACAACGCTGAAGATATTCGATTTCACCGCGAGAACTTGCGATACCGTTC
TCACCGGTCACAACTGGGATGTCAAATCCTGCGACTGGCATCCCACCAAA
GGTCTCCTTGTCTCTGGGTCCAAAGACCATCAGGTCAAGTTCTGGGATCC
GCGCACAGCAAGATGCTTGACAACGCTCCATAGCCACAAGAATACCGTCA
CAGCGACGAGGTTTTCCCGCGTAAACAATAACCTTCTAGCTACATCCTCT
CGGGATCAAACGGCGAGAGTTTTCGACTTGCGCATGATGCGAGATATTTG
TATCCTCCGAGGCCATGAGAAGCCCGTCTCCTCTCTAACATGGCACCCGA
TTCACAGCTCTCTCATATCTACAGGTAGTGAGGACGGGTCTCTATATCAC
TATTTGCTTGATGAACCAAACCTGCCCTCCGGGCAGATCCCTACAATTGC
GCCATATGACAGCAACGACCCGGCTAACACGCCGGCGCAGGTGATCTACC
CTGCCCACAAGGTACAGTACGCGCACGGTGCCACCATCTGGTCCCTCGAC
TGGCATCCTCTGGGTCATATTCTTGCATCCGGATCTAAAGATAACTTCAC
ACGGTTCTGGTCCCGTGCCAGACCCGGAGAGACTAGTTACATGAAGGATA
GGTTCCACATCGGAGAAGAGGCGGCGGAGGCCCAGGGTACATGGAGCCGG
GGCTTCGGACGGCGGCAGATGCGTGAAGAGGAAGAACAAGAACTTCAGGA
TGAGGCAGAGAGCTTGGTCGATCAGAAGAAACCGGCCGGAATGTCATCTC
TTCCCGGAATTCAATTCGCACCACCCGGCGCCGCACCACAGCCAGACGGG
ATGGGTTCGATACTGCCAGGAATTGGGGCTCCCCAGCCCCCACCCCAGCC
GGGGTTTTCCACTTCAATGCCGCAAATGGATCCTGGGCGTCTAGCAGCTC
TTTTGTCCAATCAACCGCCCCCTCAGCCGAACAATTTCCCTCCCACAACG
GGACTGCCAGGGTTTCCCATGCACCCTGCTATGTCGGGGACACCTCCGGT
GAACGTTGACCTGGCAGAACTGCAGAAGCAGCTTCTTTCTCAAGGAATCT
CGCTGCCCCAGAACTTTCCGCCGCCAAATTTTCCTGGCATGCCCGGGGGC
CTTCCCGGCCTGCAAGGGAGCAGTACGCCCGATCACGGATATGGAAGATG
A
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Coding sequence (CDS) from alignment at MCQH01000231:633515..635565+

>ATCC10864_010122-T1 ID=ATCC10864_010122-T1|Name=ATCC10864_010122-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7284bp|location=Sequence derived from alignment at MCQH01000231:633515..635565+ (Aspergillus niger ATCC 10864)
ATGGCTTTTTACGACGACCCTGGGAACGATTCCCAGCCATTTGGGAGGCC
CCCTAAATCCTACGAAGGAGGGATTGCTGGGCCGCGACGACCGAGACTCG
TGACGGACTATGGATCATCAATGGTGCAATGGATACGCACACGGAAACCC
CGCTATAAAGGAGGTCATCAGATTGAGGTGGAAAGGCCTAGTGCAAGCTA
TGTTGTGGATATGCTCCCCCCTCTTGCACGAGTCCATTCTCCGGCGGATA
CTATACCAGTGCGGCATTTACATCAGTCGATTGGAAAATCGAAGAAACCG
ATCACTGTCGTACGATGGACACCGGAAGGAAGACGCCTGCTAACGGGAGG
CCACACGGGCGAATTCATGCTATGGAATGGAACTGCCTTCAACTTCGAAA
CTGTCATGGATGCACATTATGATCAGCTACAAGCTGGAGTAACCTCCTTA
GCTTGGTCCCACAGTCATGACTGGTTAATATCCGGAGGACAGAAGGGTGA
CGTGAAGTATTGGCGACCTAACTTTAACAACGTCGAGACGATCGATGACG
CACATCACGATGCTGTACGCGATTTGGCATGGTCACCAAGTGATACTAAA
TTCCTCTCCGCATCCGACGACACAACGCTGAAGATATTCGATTTCACCGC
GAGAACTTGCGATACCGTTCTCACCGGTCACAACTGGGATGTCAAATCCT
GCGACTGGCATCCCACCAAAGGTCTCCTTGTCTCTGGGTCCAAAGACCAT
CAGGTCAAGTTCTGGGATCCGCGCACAGCAAGATGCTTGACAACGCTCCA
TAGCCACAAGAATACCGTCACAGCGACGAGGTTTTCCCGCGTAAACAATA
ACCTTCTAGCTACATCCTCTCGGGATCAAACGGCGAGAGTTTTCGACTTG
CGCATGATGCGAGATATTTGTATCCTCCGAGGCCATGAGAAGCCCGTCTC
CTCTCTAACATGGCACCCGATTCACAGCTCTCTCATATCTACAGGTAGTG
AGGACGGGTCTCTATATCACTATTTGCTTGATGAACCAAACCTGCCCTCC
GGGCAGATCCCTACAATTGCGCCATATGACAGCAACGACCCGGCTAACAC
GCCGGCGCAGGTGATCTACCCTGCCCACAAGGTACAGTACGCGCACGGTG
CCACCATCTGGTCCCTCGACTGGCATCCTCTGGGTCATATTCTTGCATCC
GGATCTAAAGATAACTTCACACGGTTCTGGTCCCGTGCCAGACCCGGAGA
GACTAGTTACATGAAGGATAGGTTCCACATCGGAGAAGAGGCGGCGGAGG
CCCAGGGTACATGGAGCCGGGGCTTCGGACGGCGGCAGATGCGTGAAGAG
GAAGAACAAGAACTTCAGGATGAGGCAGAGAGCTTGGTCGATCAGAAGAA
ACCGGCCGGAATGTCATCTCTTCCCGGAATTCAATTCGCACCACCCGGCG
CCGCACCACAGCCAGACGGGATGGGTTCGATACTGCCAGGAATTGGGGCT
CCCCAGCCCCCACCCCAGCCGGGGTTTTCCACTTCAATGCCGCAAATGGA
TCCTGGGCGTCTAGCAGCTCTTTTGTCCAATCAACCGCCCCCTCAGCCGA
ACAATTTCCCTCCCACAACGGGACTGCCAGGGTTTCCCATGCACCCTGCT
ATGTCGGGGACACCTCCGGTGAACGTTGACCTGGCAGAACTGCAGAAGCA
GCTTCTTTCTCAAGGAATCTCGCTGCCCCAGAACTTTCCGCCGCCAAATT
TTCCTGGCATGCCCGGGGGCCTTCCCGGCCTGCAAGGGAGCAGTACGCCC
GATCACGGATATGGAAGATGAATGGCTTTTTACGACGACCCTGGGAACGA
TTCCCAGCCATTTGGGAGGCCCCCTAAATCCTACGAAGGAGGGATTGCTG
GGCCGCGACGACCGAGACTCGTGACGGACTATGGATCATCAATGGTGCAA
TGGATACGCACACGGAAACCCCGCTATAAAGGAGGTCATCAGATTGAGGT
GGAAAGGCCTAGTGCAAGCTATGTTGTGGATATGCTCCCCCCTCTTGCAC
GAGTCCATTCTCCGGCGGATACTATACCAGTGCGGCATTTACATCAGTCG
ATTGGAAAATCGAAGAAACCGATCACTGTCGTACGATGGACACCGGAAGG
AAGACGCCTGCTAACGGGAGGCCACACGGGCGAATTCATGCTATGGAATG
GAACTGCCTTCAACTTCGAAACTGTCATGGATGCACATTATGATCAGCTA
CAAGCTGGAGTAACCTCCTTAGCTTGGTCCCACAGTCATGACTGGTTAAT
ATCCGGAGGACAGAAGGGTGACGTGAAGTATTGGCGACCTAACTTTAACA
ACGTCGAGACGATCGATGACGCACATCACGATGCTGTACGCGATTTGGCA
TGGTCACCAAGTGATACTAAATTCCTCTCCGCATCCGACGACACAACGCT
GAAGATATTCGATTTCACCGCGAGAACTTGCGATACCGTTCTCACCGGTC
ACAACTGGGATGTCAAATCCTGCGACTGGCATCCCACCAAAGGTCTCCTT
GTCTCTGGGTCCAAAGACCATCAGGTCAAGTTCTGGGATCCGCGCACAGC
AAGATGCTTGACAACGCTCCATAGCCACAAGAATACCGTCACAGCGACGA
GGTTTTCCCGCGTAAACAATAACCTTCTAGCTACATCCTCTCGGGATCAA
ACGGCGAGAGTTTTCGACTTGCGCATGATGCGAGATATTTGTATCCTCCG
AGGCCATGAGAAGCCCGTCTCCTCTCTAACATGGCACCCGATTCACAGCT
CTCTCATATCTACAGGTAGTGAGGACGGGTCTCTATATCACTATTTGCTT
GATGAACCAAACCTGCCCTCCGGGCAGATCCCTACAATTGCGCCATATGA
CAGCAACGACCCGGCTAACACGCCGGCGCAGGTGATCTACCCTGCCCACA
AGGTACAGTACGCGCACGGTGCCACCATCTGGTCCCTCGACTGGCATCCT
CTGGGTCATATTCTTGCATCCGGATCTAAAGATAACTTCACACGGTTCTG
GTCCCGTGCCAGACCCGGAGAGACTAGTTACATGAAGGATAGGTTCCACA
TCGGAGAAGAGGCGGCGGAGGCCCAGGGTACATGGAGCCGGGGCTTCGGA
CGGCGGCAGATGCGTGAAGAGGAAGAACAAGAACTTCAGGATGAGGCAGA
GAGCTTGGTCGATCAGAAGAAACCGGCCGGAATGTCATCTCTTCCCGGAA
TTCAATTCGCACCACCCGGCGCCGCACCACAGCCAGACGGGATGGGTTCG
ATACTGCCAGGAATTGGGGCTCCCCAGCCCCCACCCCAGCCGGGGTTTTC
CACTTCAATGCCGCAAATGGATCCTGGGCGTCTAGCAGCTCTTTTGTCCA
ATCAACCGCCCCCTCAGCCGAACAATTTCCCTCCCACAACGGGACTGCCA
GGGTTTCCCATGCACCCTGCTATGTCGGGGACACCTCCGGTGAACGTTGA
CCTGGCAGAACTGCAGAAGCAGCTTCTTTCTCAAGGAATCTCGCTGCCCC
AGAACTTTCCGCCGCCAAATTTTCCTGGCATGCCCGGGGGCCTTCCCGGC
CTGCAAGGGAGCAGTACGCCCGATCACGGATATGGAAGATGAATGGCTTT
TTACGACGACCCTGGGAACGATTCCCAGCCATTTGGGAGGCCCCCTAAAT
CCTACGAAGGAGGGATTGCTGGGCCGCGACGACCGAGACTCGTGACGGAC
TATGGATCATCAATGGTGCAATGGATACGCACACGGAAACCCCGCTATAA
AGGAGGTCATCAGATTGAGGTGGAAAGGCCTAGTGCAAGCTATGTTGTGG
ATATGCTCCCCCCTCTTGCACGAGTCCATTCTCCGGCGGATACTATACCA
GTGCGGCATTTACATCAGTCGATTGGAAAATCGAAGAAACCGATCACTGT
CGTACGATGGACACCGGAAGGAAGACGCCTGCTAACGGGAGGCCACACGG
GCGAATTCATGCTATGGAATGGAACTGCCTTCAACTTCGAAACTGTCATG
GATGCACATTATGATCAGCTACAAGCTGGAGTAACCTCCTTAGCTTGGTC
CCACAGTCATGACTGGTTAATATCCGGAGGACAGAAGGGTGACGTGAAGT
ATTGGCGACCTAACTTTAACAACGTCGAGACGATCGATGACGCACATCAC
GATGCTGTACGCGATTTGGCATGGTCACCAAGTGATACTAAATTCCTCTC
CGCATCCGACGACACAACGCTGAAGATATTCGATTTCACCGCGAGAACTT
GCGATACCGTTCTCACCGGTCACAACTGGGATGTCAAATCCTGCGACTGG
CATCCCACCAAAGGTCTCCTTGTCTCTGGGTCCAAAGACCATCAGGTCAA
GTTCTGGGATCCGCGCACAGCAAGATGCTTGACAACGCTCCATAGCCACA
AGAATACCGTCACAGCGACGAGGTTTTCCCGCGTAAACAATAACCTTCTA
GCTACATCCTCTCGGGATCAAACGGCGAGAGTTTTCGACTTGCGCATGAT
GCGAGATATTTGTATCCTCCGAGGCCATGAGAAGCCCGTCTCCTCTCTAA
CATGGCACCCGATTCACAGCTCTCTCATATCTACAGGTAGTGAGGACGGG
TCTCTATATCACTATTTGCTTGATGAACCAAACCTGCCCTCCGGGCAGAT
CCCTACAATTGCGCCATATGACAGCAACGACCCGGCTAACACGCCGGCGC
AGGTGATCTACCCTGCCCACAAGGTACAGTACGCGCACGGTGCCACCATC
TGGTCCCTCGACTGGCATCCTCTGGGTCATATTCTTGCATCCGGATCTAA
AGATAACTTCACACGGTTCTGGTCCCGTGCCAGACCCGGAGAGACTAGTT
ACATGAAGGATAGGTTCCACATCGGAGAAGAGGCGGCGGAGGCCCAGGGT
ACATGGAGCCGGGGCTTCGGACGGCGGCAGATGCGTGAAGAGGAAGAACA
AGAACTTCAGGATGAGGCAGAGAGCTTGGTCGATCAGAAGAAACCGGCCG
GAATGTCATCTCTTCCCGGAATTCAATTCGCACCACCCGGCGCCGCACCA
CAGCCAGACGGGATGGGTTCGATACTGCCAGGAATTGGGGCTCCCCAGCC
CCCACCCCAGCCGGGGTTTTCCACTTCAATGCCGCAAATGGATCCTGGGC
GTCTAGCAGCTCTTTTGTCCAATCAACCGCCCCCTCAGCCGAACAATTTC
CCTCCCACAACGGGACTGCCAGGGTTTCCCATGCACCCTGCTATGTCGGG
GACACCTCCGGTGAACGTTGACCTGGCAGAACTGCAGAAGCAGCTTCTTT
CTCAAGGAATCTCGCTGCCCCAGAACTTTCCGCCGCCAAATTTTCCTGGC
ATGCCCGGGGGCCTTCCCGGCCTGCAAGGGAGCAGTACGCCCGATCACGG
ATATGGAAGATGAATGGCTTTTTACGACGACCCTGGGAACGATTCCCAGC
CATTTGGGAGGCCCCCTAAATCCTACGAAGGAGGGATTGCTGGGCCGCGA
CGACCGAGACTCGTGACGGACTATGGATCATCAATGGTGCAATGGATACG
CACACGGAAACCCCGCTATAAAGGAGGTCATCAGATTGAGGTGGAAAGGC
CTAGTGCAAGCTATGTTGTGGATATGCTCCCCCCTCTTGCACGAGTCCAT
TCTCCGGCGGATACTATACCAGTGCGGCATTTACATCAGTCGATTGGAAA
ATCGAAGAAACCGATCACTGTCGTACGATGGACACCGGAAGGAAGACGCC
TGCTAACGGGAGGCCACACGGGCGAATTCATGCTATGGAATGGAACTGCC
TTCAACTTCGAAACTGTCATGGATGCACATTATGATCAGCTACAAGCTGG
AGTAACCTCCTTAGCTTGGTCCCACAGTCATGACTGGTTAATATCCGGAG
GACAGAAGGGTGACGTGAAGTATTGGCGACCTAACTTTAACAACGTCGAG
ACGATCGATGACGCACATCACGATGCTGTACGCGATTTGGCATGGTCACC
AAGTGATACTAAATTCCTCTCCGCATCCGACGACACAACGCTGAAGATAT
TCGATTTCACCGCGAGAACTTGCGATACCGTTCTCACCGGTCACAACTGG
GATGTCAAATCCTGCGACTGGCATCCCACCAAAGGTCTCCTTGTCTCTGG
GTCCAAAGACCATCAGGTCAAGTTCTGGGATCCGCGCACAGCAAGATGCT
TGACAACGCTCCATAGCCACAAGAATACCGTCACAGCGACGAGGTTTTCC
CGCGTAAACAATAACCTTCTAGCTACATCCTCTCGGGATCAAACGGCGAG
AGTTTTCGACTTGCGCATGATGCGAGATATTTGTATCCTCCGAGGCCATG
AGAAGCCCGTCTCCTCTCTAACATGGCACCCGATTCACAGCTCTCTCATA
TCTACAGGTAGTGAGGACGGGTCTCTATATCACTATTTGCTTGATGAACC
AAACCTGCCCTCCGGGCAGATCCCTACAATTGCGCCATATGACAGCAACG
ACCCGGCTAACACGCCGGCGCAGGTGATCTACCCTGCCCACAAGGTACAG
TACGCGCACGGTGCCACCATCTGGTCCCTCGACTGGCATCCTCTGGGTCA
TATTCTTGCATCCGGATCTAAAGATAACTTCACACGGTTCTGGTCCCGTG
CCAGACCCGGAGAGACTAGTTACATGAAGGATAGGTTCCACATCGGAGAA
GAGGCGGCGGAGGCCCAGGGTACATGGAGCCGGGGCTTCGGACGGCGGCA
GATGCGTGAAGAGGAAGAACAAGAACTTCAGGATGAGGCAGAGAGCTTGG
TCGATCAGAAGAAACCGGCCGGAATGTCATCTCTTCCCGGAATTCAATTC
GCACCACCCGGCGCCGCACCACAGCCAGACGGGATGGGTTCGATACTGCC
AGGAATTGGGGCTCCCCAGCCCCCACCCCAGCCGGGGTTTTCCACTTCAA
TGCCGCAAATGGATCCTGGGCGTCTAGCAGCTCTTTTGTCCAATCAACCG
CCCCCTCAGCCGAACAATTTCCCTCCCACAACGGGACTGCCAGGGTTTCC
CATGCACCCTGCTATGTCGGGGACACCTCCGGTGAACGTTGACCTGGCAG
AACTGCAGAAGCAGCTTCTTTCTCAAGGAATCTCGCTGCCCCAGAACTTT
CCGCCGCCAAATTTTCCTGGCATGCCCGGGGGCCTTCCCGGCCTGCAAGG
GAGCAGTACGCCCGATCACGGATATGGAAGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PFS2ATCC10864_010122Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010122-T1.exon1ATCC10864_010122-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010122-T1.exon2ATCC10864_010122-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010122-T1.exon3ATCC10864_010122-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010122-T1.exon4ATCC10864_010122-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010122-T1.cdsATCC10864_010122-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010122-T1ATCC10864_010122-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR001680
InterProIPR036322
PFAMPF00400
Properties
Property NameValue
NoteBUSCO:EOG09261LPY
Productpre-mRNA cleavage and polyadenylation factor (CPF) complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:633515..635565 +
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