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ATCC10864_010213-T1, ATCC10864_010213-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010213-T1
Unique NameATCC10864_010213-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:874568..875845+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010213-T1 ID=ATCC10864_010213-T1|Name=ATCC10864_010213-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1278bp|location=Sequence derived from alignment at MCQH01000231:874568..875845+ (Aspergillus niger ATCC 10864)
ATGGCCACTGTCAACATTCGTCGGGATGTCTCCGATCCCTTCTACCGTTA
CAAGATGGAGCGCCTTCAGTCCAAGATTGAGGGCAAGGGCAACGGTATCA
AGACCGTCGTCGTCAACCTGAACTCGGTCGCTCAGTCGCTCAGTCGGCCT
CCGTCTTACGTGATCAAGTACTTTGGCTTCGAGCTGGGTGCTCAGGCCAA
CGCCAAGCCCACCGATGATCGCTGGATCATCAACGGTGCCCATGATGCCC
CCAAGCTTCAAGACTATCTGGACGGCTTTATTTCCAAGTTCGTGCTGTGC
AAGAAATGTAAGAATCCGGAAACGGATGTCATCATCAAGGATGAGAAGAT
CTTTTTGGACTGCAAGGCCTGTGGACAGCGCTCCGAGGTCGACTCCCGTC
TGAAACTGAGCACCTTCATCATCCGCAACGGCGCGCAAGGCAAGGGAGGG
AAGAAGGACAAGGCCTCGAAGAAGGCCCGTCGTGATCGAAACAAGGAGAA
GAATGACACTGCGAATGGCGACAAGGATGGCAGCCCCGGAGATAGCAACA
ACTCCGAGAACGGTGATGAGGAGAACGGCGATGTCGCCCTGGAAGCAGGT
AGCGATGACGAACTCACTCGCCGTATCAAGGCCGGTGCCAAGGACATCGA
GGCTGATGAGATCGATGATGATGAATGGGCTGTTGACGTGTCGGAGGAGG
CCGTCAAGGCTCGTGCCAAGGAGCTCCCCGATGATCTCAAGCGCTCCCTC
GTTCTCGAGGATGGTGATGACGAGGGTGCTGACGGCCCCTCTGCCTACGA
CGAGCTTGGCAGCTGGATCCTCAACGCCGCTTCTGAGAAGGGCGGTGTCA
CCGCTGTTAGTGACGTCGATATCTACATGAAGGCCAAGGAGTACGGCATC
GAGAACAAGCACAAGACTGTCGCTGTTTTGGCTCAGACCATCTTCGATGA
GAAGATCGCCAAGCAGGTTCCTTCCCGTGCTGCTCTGCTGAAGAAGATGA
TCACCTCCGAGCGCCACGAGAAGGCCTTCCTCGGTGGAACCGAGCGCTTT
GTCGGCAAGGATCACCCTGAGCTCATTAGCCAGGTCCCCGCTGTCTTGCT
CAAGTACTATGAGCACGACCTCGTCTCTGAGGAGACCCTCAAGGCGTGGG
GTTCCAAGGCTAGCAAGAAGTATGTCGACATCCAGACCAGCAAGAAGGTC
CGCAAGGCTGCTGAACCCTTCCTCGAATGGCTTGAGAACGCCGAGAGTGA
GGAGGAGAGCGAGGAGGAGAGCGACTAG
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Coding sequence (CDS) from alignment at MCQH01000231:874568..875845+

>ATCC10864_010213-T1 ID=ATCC10864_010213-T1|Name=ATCC10864_010213-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1278bp|location=Sequence derived from alignment at MCQH01000231:874568..875845+ (Aspergillus niger ATCC 10864)
ATGGCCACTGTCAACATTCGTCGGGATGTCTCCGATCCCTTCTACCGTTA
CAAGATGGAGCGCCTTCAGTCCAAGATTGAGGGCAAGGGCAACGGTATCA
AGACCGTCGTCGTCAACCTGAACTCGGTCGCTCAGTCGCTCAGTCGGCCT
CCGTCTTACGTGATCAAGTACTTTGGCTTCGAGCTGGGTGCTCAGGCCAA
CGCCAAGCCCACCGATGATCGCTGGATCATCAACGGTGCCCATGATGCCC
CCAAGCTTCAAGACTATCTGGACGGCTTTATTTCCAAGTTCGTGCTGTGC
AAGAAATGTAAGAATCCGGAAACGGATGTCATCATCAAGGATGAGAAGAT
CTTTTTGGACTGCAAGGCCTGTGGACAGCGCTCCGAGGTCGACTCCCGTC
TGAAACTGAGCACCTTCATCATCCGCAACGGCGCGCAAGGCAAGGGAGGG
AAGAAGGACAAGGCCTCGAAGAAGGCCCGTCGTGATCGAAACAAGGAGAA
GAATGACACTGCGAATGGCGACAAGGATGGCAGCCCCGGAGATAGCAACA
ACTCCGAGAACGGTGATGAGGAGAACGGCGATGTCGCCCTGGAAGCAGGT
AGCGATGACGAACTCACTCGCCGTATCAAGGCCGGTGCCAAGGACATCGA
GGCTGATGAGATCGATGATGATGAATGGGCTGTTGACGTGTCGGAGGAGG
CCGTCAAGGCTCGTGCCAAGGAGCTCCCCGATGATCTCAAGCGCTCCCTC
GTTCTCGAGGATGGTGATGACGAGGGTGCTGACGGCCCCTCTGCCTACGA
CGAGCTTGGCAGCTGGATCCTCAACGCCGCTTCTGAGAAGGGCGGTGTCA
CCGCTGTTAGTGACGTCGATATCTACATGAAGGCCAAGGAGTACGGCATC
GAGAACAAGCACAAGACTGTCGCTGTTTTGGCTCAGACCATCTTCGATGA
GAAGATCGCCAAGCAGGTTCCTTCCCGTGCTGCTCTGCTGAAGAAGATGA
TCACCTCCGAGCGCCACGAGAAGGCCTTCCTCGGTGGAACCGAGCGCTTT
GTCGGCAAGGATCACCCTGAGCTCATTAGCCAGGTCCCCGCTGTCTTGCT
CAAGTACTATGAGCACGACCTCGTCTCTGAGGAGACCCTCAAGGCGTGGG
GTTCCAAGGCTAGCAAGAAGTATGTCGACATCCAGACCAGCAAGAAGGTC
CGCAAGGCTGCTGAACCCTTCCTCGAATGGCTTGAGAACGCCGAGAGTGA
GGAGGAGAGCGAGGAGGAGAGCGACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010213ATCC10864_010213Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010213-T1.exon1ATCC10864_010213-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010213-T1.cdsATCC10864_010213-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010213-T1ATCC10864_010213-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR016189
InterProIPR016024
PFAMPF01873
InterProIPR002735
InterProIPR016190
PFAMPF02020
InterProIPR016021
InterProIPR003307
Properties
Property NameValue
NoteBUSCO:EOG09262M7B
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:874568..875845 +
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