You are here

Home

ATCC10864_010404-T1, ATCC10864_010404-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010404-T1
Unique NameATCC10864_010404-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000231:1419179..1421120+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010404-T1 ID=ATCC10864_010404-T1|Name=ATCC10864_010404-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1942bp|location=Sequence derived from alignment at MCQH01000231:1419179..1421120+ (Aspergillus niger ATCC 10864)
ATGGCCACTGACAAGCCTCCCACCACTACCGGGGTCAGTGAGGATCCGAT
CTCTTTGGATCCCGATACTCCTCAACAGCCTGTCGAGGATGAACAGGATA
AGCAGGATGGTGTTCGTGTCGCCGAAGCAGTTACTGCTTCTTGGTCGAAG
AAATCTCTGATTATCACTTATGCTTCGTGAGTGGCTTGATTTCTGTTCCT
CTGGAGCGACTGCTGAACGGTGTATAGCATGTGGCTCTTGTATTTCGTCA
ATGGATTGAACAGCAGCTTGACCGCGAACCTTTCCGCGTATATCACCAGT
GATTTCTCTGAGCACTCGTTGCTCACTGTGATTACTGTCGTTACTAGTGT
CATGGGTGCTGCTTGTGTCATGCCTATTGCTAAGGTACTGAACCTGTGGG
ATCGTACATTGGGTGTCTGCATCATGGTGTTGATTGCTATCATGGGCCTG
ATTATGATGGCTGGCTGCAACAACATTGCCACGTACTGTGCTGCTCAGGT
GAGTTTTTACCCTCTGTGTATACGAGATCGATCATTCTTTTCGTCTCATC
TGCTATGCTTCAAGAATGCCCAAGCGTACTAAATCCGCGACACTAATAGG
CATTCTACACCGTCGGATTCACCGGTGTCATCTTCTGTGTCGACGTGATG
ACCTCCGATACATCCTCGCTCCGCAATCGAGGTATCGCCTACGCCTTCAC
CTCCTCTCCCTACATTATCACTGCCTTTGCCGGCTCTCCGCTCTCCAACC
AGTTCCACGAGACCAACTGGCGCTGGGCCTACGGAACCATCTGCATTATC
CTTCCCATCGTCGCAATGCCTCTGGTCATAACCTGGGAACTGGCGAAGCG
CAAGGCAGACAAGGAGGGTCGCCTGCAATACAAGCCGCGAAGCACCCGTA
CCTGGTGGCAGAGCACCTGGTTCTACATCATCGAGTTTGACAGTGAGTCT
TCTCCCGAATAACCCTCTACTACCCCAACACCCCCGACTAACACTCTCTT
CCCCAATCAGTCATCGGCATCCTCTTCATGATCGGCGGACTTATCCTCTT
CCTCACCTCGTTCAACATCGCCGGAAACACCGAAGGCGAATGGAAATCCG
CCAAGATCATCGCAATGATGATCGTCGGTTTCTTCGTCCTCGTCGGCTTC
GTTGCCTACGAGCGCTGGGGAGCCCCCAAGCCCTTCATTCCCTACCACCT
CCTCGCCAACCGCACCGTCATCGGCGCTTGCCTCCTGGACATAACCTACC
AAGTCTCCTACTATTGCTGGGCCAGCTACTTCACCTCCTTCCTGCAAGTG
GTCTACAACACCAGTCTCACCCAAGCCGGATACATCAGCGCCATCTTCGA
CCTCATGGACCCTATCTGGCTGATCGGCTGCGGGTACCTGATCCGCGTCA
CCGGCCGCTTCAAGTGGCTACTCATGTGGGCTGTCCCGCTCTACCTACTG
GCCAGCGGCTTGATGATCTACTTCCGCCAGCCCGGCTTCAGCATTGGATA
CATATGCATGTGCCAGATCTTCCTGGCTGTTGGTGGCGGTACCTTGATTC
TTATTGAACAGGTTGCTGTCCTGGCGGCATCTAGACATGAGGACTACGCT
GCTATGTTGGCGTTGCTGAGCACGTTTGGTAATCTGGGTGGTGCTGTCGG
TAGTAGTGTCTCTGGTGCTATTTGGACCAATACTCTTCCTCAGAAGCTGA
GGGAGCTGTTGCCCGCTGAGACAAAGGATCAGTGGGCGGAGATTTATGAG
TCGTTGGATGTGCAACTGAGTTATCCGGTTGGGTCCGAGACTCGTATTGC
GATTCAGAATGCTTATGCTTGGAGTCAGCGCAATATGATGATTGCGGGTA
CTGCTGTCATGGGGTTGTCGATTGCTTGGGTGTTGATGATGAGGAATATC
AAGATTAAGGATAATAAGGATGTGAGGCAGGTCCTGTTCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000231:1419179..1421120+

>ATCC10864_010404-T1 ID=ATCC10864_010404-T1|Name=ATCC10864_010404-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6888bp|location=Sequence derived from alignment at MCQH01000231:1419179..1421120+ (Aspergillus niger ATCC 10864)
ATGGCCACTGACAAGCCTCCCACCACTACCGGGGTCAGTGAGGATCCGAT
CTCTTTGGATCCCGATACTCCTCAACAGCCTGTCGAGGATGAACAGGATA
AGCAGGATGGTGTTCGTGTCGCCGAAGCAGTTACTGCTTCTTGGTCGAAG
AAATCTCTGATTATCACTTATGCTTCCATGTGGCTCTTGTATTTCGTCAA
TGGATTGAACAGCAGCTTGACCGCGAACCTTTCCGCGTATATCACCAGTG
ATTTCTCTGAGCACTCGTTGCTCACTGTGATTACTGTCGTTACTAGTGTC
ATGGGTGCTGCTTGTGTCATGCCTATTGCTAAGGTACTGAACCTGTGGGA
TCGTACATTGGGTGTCTGCATCATGGTGTTGATTGCTATCATGGGCCTGA
TTATGATGGCTGGCTGCAACAACATTGCCACGTACTGTGCTGCTCAGGCA
TTCTACACCGTCGGATTCACCGGTGTCATCTTCTGTGTCGACGTGATGAC
CTCCGATACATCCTCGCTCCGCAATCGAGGTATCGCCTACGCCTTCACCT
CCTCTCCCTACATTATCACTGCCTTTGCCGGCTCTCCGCTCTCCAACCAG
TTCCACGAGACCAACTGGCGCTGGGCCTACGGAACCATCTGCATTATCCT
TCCCATCGTCGCAATGCCTCTGGTCATAACCTGGGAACTGGCGAAGCGCA
AGGCAGACAAGGAGGGTCGCCTGCAATACAAGCCGCGAAGCACCCGTACC
TGGTGGCAGAGCACCTGGTTCTACATCATCGAGTTTGACATCATCGGCAT
CCTCTTCATGATCGGCGGACTTATCCTCTTCCTCACCTCGTTCAACATCG
CCGGAAACACCGAAGGCGAATGGAAATCCGCCAAGATCATCGCAATGATG
ATCGTCGGTTTCTTCGTCCTCGTCGGCTTCGTTGCCTACGAGCGCTGGGG
AGCCCCCAAGCCCTTCATTCCCTACCACCTCCTCGCCAACCGCACCGTCA
TCGGCGCTTGCCTCCTGGACATAACCTACCAAGTCTCCTACTATTGCTGG
GCCAGCTACTTCACCTCCTTCCTGCAAGTGGTCTACAACACCAGTCTCAC
CCAAGCCGGATACATCAGCGCCATCTTCGACCTCATGGACCCTATCTGGC
TGATCGGCTGCGGGTACCTGATCCGCGTCACCGGCCGCTTCAAGTGGCTA
CTCATGTGGGCTGTCCCGCTCTACCTACTGGCCAGCGGCTTGATGATCTA
CTTCCGCCAGCCCGGCTTCAGCATTGGATACATATGCATGTGCCAGATCT
TCCTGGCTGTTGGTGGCGGTACCTTGATTCTTATTGAACAGGTTGCTGTC
CTGGCGGCATCTAGACATGAGGACTACGCTGCTATGTTGGCGTTGCTGAG
CACGTTTGGTAATCTGGGTGGTGCTGTCGGTAGTAGTGTCTCTGGTGCTA
TTTGGACCAATACTCTTCCTCAGAAGCTGAGGGAGCTGTTGCCCGCTGAG
ACAAAGGATCAGTGGGCGGAGATTTATGAGTCGTTGGATGTGCAACTGAG
TTATCCGGTTGGGTCCGAGACTCGTATTGCGATTCAGAATGCTTATGCTT
GGAGTCAGCGCAATATGATGATTGCGGGTACTGCTGTCATGGGGTTGTCG
ATTGCTTGGGTGTTGATGATGAGGAATATCAAGATTAAGGATAATAAGGA
TGTGAGGCAGGTCCTGTTCTAGATGGCCACTGACAAGCCTCCCACCACTA
CCGGGGTCAGTGAGGATCCGATCTCTTTGGATCCCGATACTCCTCAACAG
CCTGTCGAGGATGAACAGGATAAGCAGGATGGTGTTCGTGTCGCCGAAGC
AGTTACTGCTTCTTGGTCGAAGAAATCTCTGATTATCACTTATGCTTCCA
TGTGGCTCTTGTATTTCGTCAATGGATTGAACAGCAGCTTGACCGCGAAC
CTTTCCGCGTATATCACCAGTGATTTCTCTGAGCACTCGTTGCTCACTGT
GATTACTGTCGTTACTAGTGTCATGGGTGCTGCTTGTGTCATGCCTATTG
CTAAGGTACTGAACCTGTGGGATCGTACATTGGGTGTCTGCATCATGGTG
TTGATTGCTATCATGGGCCTGATTATGATGGCTGGCTGCAACAACATTGC
CACGTACTGTGCTGCTCAGGCATTCTACACCGTCGGATTCACCGGTGTCA
TCTTCTGTGTCGACGTGATGACCTCCGATACATCCTCGCTCCGCAATCGA
GGTATCGCCTACGCCTTCACCTCCTCTCCCTACATTATCACTGCCTTTGC
CGGCTCTCCGCTCTCCAACCAGTTCCACGAGACCAACTGGCGCTGGGCCT
ACGGAACCATCTGCATTATCCTTCCCATCGTCGCAATGCCTCTGGTCATA
ACCTGGGAACTGGCGAAGCGCAAGGCAGACAAGGAGGGTCGCCTGCAATA
CAAGCCGCGAAGCACCCGTACCTGGTGGCAGAGCACCTGGTTCTACATCA
TCGAGTTTGACATCATCGGCATCCTCTTCATGATCGGCGGACTTATCCTC
TTCCTCACCTCGTTCAACATCGCCGGAAACACCGAAGGCGAATGGAAATC
CGCCAAGATCATCGCAATGATGATCGTCGGTTTCTTCGTCCTCGTCGGCT
TCGTTGCCTACGAGCGCTGGGGAGCCCCCAAGCCCTTCATTCCCTACCAC
CTCCTCGCCAACCGCACCGTCATCGGCGCTTGCCTCCTGGACATAACCTA
CCAAGTCTCCTACTATTGCTGGGCCAGCTACTTCACCTCCTTCCTGCAAG
TGGTCTACAACACCAGTCTCACCCAAGCCGGATACATCAGCGCCATCTTC
GACCTCATGGACCCTATCTGGCTGATCGGCTGCGGGTACCTGATCCGCGT
CACCGGCCGCTTCAAGTGGCTACTCATGTGGGCTGTCCCGCTCTACCTAC
TGGCCAGCGGCTTGATGATCTACTTCCGCCAGCCCGGCTTCAGCATTGGA
TACATATGCATGTGCCAGATCTTCCTGGCTGTTGGTGGCGGTACCTTGAT
TCTTATTGAACAGGTTGCTGTCCTGGCGGCATCTAGACATGAGGACTACG
CTGCTATGTTGGCGTTGCTGAGCACGTTTGGTAATCTGGGTGGTGCTGTC
GGTAGTAGTGTCTCTGGTGCTATTTGGACCAATACTCTTCCTCAGAAGCT
GAGGGAGCTGTTGCCCGCTGAGACAAAGGATCAGTGGGCGGAGATTTATG
AGTCGTTGGATGTGCAACTGAGTTATCCGGTTGGGTCCGAGACTCGTATT
GCGATTCAGAATGCTTATGCTTGGAGTCAGCGCAATATGATGATTGCGGG
TACTGCTGTCATGGGGTTGTCGATTGCTTGGGTGTTGATGATGAGGAATA
TCAAGATTAAGGATAATAAGGATGTGAGGCAGGTCCTGTTCTAGATGGCC
ACTGACAAGCCTCCCACCACTACCGGGGTCAGTGAGGATCCGATCTCTTT
GGATCCCGATACTCCTCAACAGCCTGTCGAGGATGAACAGGATAAGCAGG
ATGGTGTTCGTGTCGCCGAAGCAGTTACTGCTTCTTGGTCGAAGAAATCT
CTGATTATCACTTATGCTTCCATGTGGCTCTTGTATTTCGTCAATGGATT
GAACAGCAGCTTGACCGCGAACCTTTCCGCGTATATCACCAGTGATTTCT
CTGAGCACTCGTTGCTCACTGTGATTACTGTCGTTACTAGTGTCATGGGT
GCTGCTTGTGTCATGCCTATTGCTAAGGTACTGAACCTGTGGGATCGTAC
ATTGGGTGTCTGCATCATGGTGTTGATTGCTATCATGGGCCTGATTATGA
TGGCTGGCTGCAACAACATTGCCACGTACTGTGCTGCTCAGGCATTCTAC
ACCGTCGGATTCACCGGTGTCATCTTCTGTGTCGACGTGATGACCTCCGA
TACATCCTCGCTCCGCAATCGAGGTATCGCCTACGCCTTCACCTCCTCTC
CCTACATTATCACTGCCTTTGCCGGCTCTCCGCTCTCCAACCAGTTCCAC
GAGACCAACTGGCGCTGGGCCTACGGAACCATCTGCATTATCCTTCCCAT
CGTCGCAATGCCTCTGGTCATAACCTGGGAACTGGCGAAGCGCAAGGCAG
ACAAGGAGGGTCGCCTGCAATACAAGCCGCGAAGCACCCGTACCTGGTGG
CAGAGCACCTGGTTCTACATCATCGAGTTTGACATCATCGGCATCCTCTT
CATGATCGGCGGACTTATCCTCTTCCTCACCTCGTTCAACATCGCCGGAA
ACACCGAAGGCGAATGGAAATCCGCCAAGATCATCGCAATGATGATCGTC
GGTTTCTTCGTCCTCGTCGGCTTCGTTGCCTACGAGCGCTGGGGAGCCCC
CAAGCCCTTCATTCCCTACCACCTCCTCGCCAACCGCACCGTCATCGGCG
CTTGCCTCCTGGACATAACCTACCAAGTCTCCTACTATTGCTGGGCCAGC
TACTTCACCTCCTTCCTGCAAGTGGTCTACAACACCAGTCTCACCCAAGC
CGGATACATCAGCGCCATCTTCGACCTCATGGACCCTATCTGGCTGATCG
GCTGCGGGTACCTGATCCGCGTCACCGGCCGCTTCAAGTGGCTACTCATG
TGGGCTGTCCCGCTCTACCTACTGGCCAGCGGCTTGATGATCTACTTCCG
CCAGCCCGGCTTCAGCATTGGATACATATGCATGTGCCAGATCTTCCTGG
CTGTTGGTGGCGGTACCTTGATTCTTATTGAACAGGTTGCTGTCCTGGCG
GCATCTAGACATGAGGACTACGCTGCTATGTTGGCGTTGCTGAGCACGTT
TGGTAATCTGGGTGGTGCTGTCGGTAGTAGTGTCTCTGGTGCTATTTGGA
CCAATACTCTTCCTCAGAAGCTGAGGGAGCTGTTGCCCGCTGAGACAAAG
GATCAGTGGGCGGAGATTTATGAGTCGTTGGATGTGCAACTGAGTTATCC
GGTTGGGTCCGAGACTCGTATTGCGATTCAGAATGCTTATGCTTGGAGTC
AGCGCAATATGATGATTGCGGGTACTGCTGTCATGGGGTTGTCGATTGCT
TGGGTGTTGATGATGAGGAATATCAAGATTAAGGATAATAAGGATGTGAG
GCAGGTCCTGTTCTAGATGGCCACTGACAAGCCTCCCACCACTACCGGGG
TCAGTGAGGATCCGATCTCTTTGGATCCCGATACTCCTCAACAGCCTGTC
GAGGATGAACAGGATAAGCAGGATGGTGTTCGTGTCGCCGAAGCAGTTAC
TGCTTCTTGGTCGAAGAAATCTCTGATTATCACTTATGCTTCCATGTGGC
TCTTGTATTTCGTCAATGGATTGAACAGCAGCTTGACCGCGAACCTTTCC
GCGTATATCACCAGTGATTTCTCTGAGCACTCGTTGCTCACTGTGATTAC
TGTCGTTACTAGTGTCATGGGTGCTGCTTGTGTCATGCCTATTGCTAAGG
TACTGAACCTGTGGGATCGTACATTGGGTGTCTGCATCATGGTGTTGATT
GCTATCATGGGCCTGATTATGATGGCTGGCTGCAACAACATTGCCACGTA
CTGTGCTGCTCAGGCATTCTACACCGTCGGATTCACCGGTGTCATCTTCT
GTGTCGACGTGATGACCTCCGATACATCCTCGCTCCGCAATCGAGGTATC
GCCTACGCCTTCACCTCCTCTCCCTACATTATCACTGCCTTTGCCGGCTC
TCCGCTCTCCAACCAGTTCCACGAGACCAACTGGCGCTGGGCCTACGGAA
CCATCTGCATTATCCTTCCCATCGTCGCAATGCCTCTGGTCATAACCTGG
GAACTGGCGAAGCGCAAGGCAGACAAGGAGGGTCGCCTGCAATACAAGCC
GCGAAGCACCCGTACCTGGTGGCAGAGCACCTGGTTCTACATCATCGAGT
TTGACATCATCGGCATCCTCTTCATGATCGGCGGACTTATCCTCTTCCTC
ACCTCGTTCAACATCGCCGGAAACACCGAAGGCGAATGGAAATCCGCCAA
GATCATCGCAATGATGATCGTCGGTTTCTTCGTCCTCGTCGGCTTCGTTG
CCTACGAGCGCTGGGGAGCCCCCAAGCCCTTCATTCCCTACCACCTCCTC
GCCAACCGCACCGTCATCGGCGCTTGCCTCCTGGACATAACCTACCAAGT
CTCCTACTATTGCTGGGCCAGCTACTTCACCTCCTTCCTGCAAGTGGTCT
ACAACACCAGTCTCACCCAAGCCGGATACATCAGCGCCATCTTCGACCTC
ATGGACCCTATCTGGCTGATCGGCTGCGGGTACCTGATCCGCGTCACCGG
CCGCTTCAAGTGGCTACTCATGTGGGCTGTCCCGCTCTACCTACTGGCCA
GCGGCTTGATGATCTACTTCCGCCAGCCCGGCTTCAGCATTGGATACATA
TGCATGTGCCAGATCTTCCTGGCTGTTGGTGGCGGTACCTTGATTCTTAT
TGAACAGGTTGCTGTCCTGGCGGCATCTAGACATGAGGACTACGCTGCTA
TGTTGGCGTTGCTGAGCACGTTTGGTAATCTGGGTGGTGCTGTCGGTAGT
AGTGTCTCTGGTGCTATTTGGACCAATACTCTTCCTCAGAAGCTGAGGGA
GCTGTTGCCCGCTGAGACAAAGGATCAGTGGGCGGAGATTTATGAGTCGT
TGGATGTGCAACTGAGTTATCCGGTTGGGTCCGAGACTCGTATTGCGATT
CAGAATGCTTATGCTTGGAGTCAGCGCAATATGATGATTGCGGGTACTGC
TGTCATGGGGTTGTCGATTGCTTGGGTGTTGATGATGAGGAATATCAAGA
TTAAGGATAATAAGGATGTGAGGCAGGTCCTGTTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010404ATCC10864_010404Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010404-T1.exon1ATCC10864_010404-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010404-T1.exon2ATCC10864_010404-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010404-T1.exon3ATCC10864_010404-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010404-T1.exon4ATCC10864_010404-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010404-T1.cdsATCC10864_010404-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010404-T1ATCC10864_010404-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000231supercontigMCQH01000231:1419179..1421120 +
Powered by Drupal