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ATCC10864_010688-T1, ATCC10864_010688-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010688-T1
Unique NameATCC10864_010688-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000245:59637..60446-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010688-T1 ID=ATCC10864_010688-T1|Name=ATCC10864_010688-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=810bp|location=Sequence derived from alignment at MCQH01000245:59637..60446- (Aspergillus niger ATCC 10864)
ATGGCCCCTCTCGTCTCCTCCCTGGCCCTGCGCACGCTCCGGACCCTGGT
CCAGCGTCCCGCCGCCATTAAATCCACCTCCTGCTCCATCACCACCCTCG
CCGCCGCCGCTCCCCGACGACCTTTCCAGCCTGTTCTCCGCACGCCCACC
GCAGTCGCTGCTGCTGCTGCTGCACGCAAGACCTCCATCCCCTCTTCCTC
CTCCTCCATCCTCCGGCAATTCTCCACCTCCCCGTTCCGCCAGGCTACCT
ACAACCAAGTGCGGCGCGGATGCCGTGTTGCGCAGCGCGCACGTCGCTCC
CGGTCTCCGGCGCTGATCGGCCGGTCTCAGATGAAGGGAGTGTGTTTGAA
GACGGGTATTACGAAGCCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGG
CGAGAGTGAGGTTGAGTAGTGGGAAGGTGGTTACGGCTTATATTCCTGGT
GAAGGTGAGATCACTTTCCTCCATTCGTTTTTTTGTGGTTCGGGTTGGGG
ATCGGGGGTGAGGAGAATGAGAATAGATGGGGATAATGGAATTGAGCGAG
AGAGGCTAATATCTCTGGTCTGTGTGTAGGACACAATATCCAGCAGCACA
GTGTCGTTATGGTCCGTGGTGGTCGTGTGCCTGATTGTCCTGGTGTGAAG
TACCATTTGGTTCGTGGTGCTATGGATTTGGTAGGTTTACTTTCTGATAT
GGGTTTCCTGGGAATTCGGGGGTAGGTTTGCTAACTTCTCTCAGGGTGGT
GTTGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCTAA
GAAGGACTAG
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Coding sequence (CDS) from alignment at MCQH01000245:59637..60446-

>ATCC10864_010688-T1 ID=ATCC10864_010688-T1|Name=ATCC10864_010688-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1863bp|location=Sequence derived from alignment at MCQH01000245:59637..60446- (Aspergillus niger ATCC 10864)
GGTGGTGTTGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAA
GCCTAAGAAGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGT
CCGTGGTGGTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTC
GTGGTGCTATGGATTTGATGGCCCCTCTCGTCTCCTCCCTGGCCCTGCGC
ACGCTCCGGACCCTGGTCCAGCGTCCCGCCGCCATTAAATCCACCTCCTG
CTCCATCACCACCCTCGCCGCCGCCGCTCCCCGACGACCTTTCCAGCCTG
TTCTCCGCACGCCCACCGCAGTCGCTGCTGCTGCTGCTGCACGCAAGACC
TCCATCCCCTCTTCCTCCTCCTCCATCCTCCGGCAATTCTCCACCTCCCC
GTTCCGCCAGGCTACCTACAACCAAGTGCGGCGCGGATGCCGTGTTGCGC
AGCGCGCACGTCGCTCCCGGTCTCCGGCGCTGATCGGCCGGTCTCAGATG
AAGGGAGTGTGTTTGAAGACGGGTATTACGAAGCCGAAGAAGCCTAACTC
CGGTGAGCGGAAGACGGCGAGAGTGAGGTTGAGTAGTGGGAAGGTGGTTA
CGGCTTATATTCCTGGTGAAGGGTGGTGTTGCTTCTCGGTTGAACAGTCG
GTCCAAGTATGGTACGAAGAAGCCTAAGAAGGACTAGGACACAATATCCA
GCAGCACAGTGTCGTTATGGTCCGTGGTGGTCGTGTGCCTGATTGTCCTG
GTGTGAAGTACCATTTGGTTCGTGGTGCTATGGATTTGATGGCCCCTCTC
GTCTCCTCCCTGGCCCTGCGCACGCTCCGGACCCTGGTCCAGCGTCCCGC
CGCCATTAAATCCACCTCCTGCTCCATCACCACCCTCGCCGCCGCCGCTC
CCCGACGACCTTTCCAGCCTGTTCTCCGCACGCCCACCGCAGTCGCTGCT
GCTGCTGCTGCACGCAAGACCTCCATCCCCTCTTCCTCCTCCTCCATCCT
CCGGCAATTCTCCACCTCCCCGTTCCGCCAGGCTACCTACAACCAAGTGC
GGCGCGGATGCCGTGTTGCGCAGCGCGCACGTCGCTCCCGGTCTCCGGCG
CTGATCGGCCGGTCTCAGATGAAGGGAGTGTGTTTGAAGACGGGTATTAC
GAAGCCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGGCGAGAGTGAGGT
TGAGTAGTGGGAAGGTGGTTACGGCTTATATTCCTGGTGAAGGGTGGTGT
TGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCTAAGA
AGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGTCCGTGGTG
GTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTCGTGGTGCT
ATGGATTTGATGGCCCCTCTCGTCTCCTCCCTGGCCCTGCGCACGCTCCG
GACCCTGGTCCAGCGTCCCGCCGCCATTAAATCCACCTCCTGCTCCATCA
CCACCCTCGCCGCCGCCGCTCCCCGACGACCTTTCCAGCCTGTTCTCCGC
ACGCCCACCGCAGTCGCTGCTGCTGCTGCTGCACGCAAGACCTCCATCCC
CTCTTCCTCCTCCTCCATCCTCCGGCAATTCTCCACCTCCCCGTTCCGCC
AGGCTACCTACAACCAAGTGCGGCGCGGATGCCGTGTTGCGCAGCGCGCA
CGTCGCTCCCGGTCTCCGGCGCTGATCGGCCGGTCTCAGATGAAGGGAGT
GTGTTTGAAGACGGGTATTACGAAGCCGAAGAAGCCTAACTCCGGTGAGC
GGAAGACGGCGAGAGTGAGGTTGAGTAGTGGGAAGGTGGTTACGGCTTAT
ATTCCTGGTGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010688ATCC10864_010688Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010688-T1ATCC10864_010688-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010688-T1.cdsATCC10864_010688-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010688-T1.exon3ATCC10864_010688-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010688-T1.exon2ATCC10864_010688-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010688-T1.exon1ATCC10864_010688-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005679
PFAMPF00164
InterProIPR012340
InterProIPR006032
Properties
Property NameValue
NoteBUSCO:EOG092653KS
NoteantiSMASH:Cluster_1000245.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000245supercontigMCQH01000245:59637..60446 -
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