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ATCC10864_010775-T1, ATCC10864_010775-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010775-T1
Unique NameATCC10864_010775-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:105440..106696+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010775-T1 ID=ATCC10864_010775-T1|Name=ATCC10864_010775-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1257bp|location=Sequence derived from alignment at MCQH01000246:105440..106696+ (Aspergillus niger ATCC 10864)
ATGGTAAGCACATAGAATCGTCCATTTCACGCCTCTTCTATTCAATTAGA
ATTGAGCTATCGACTACGCTGCGAATATGTCGTGTGACGATTTCCACGTC
CCGCTTCATCTCGCAACAGTCGAGAAGCGACAATAAAAAAAATTTCCGTT
GATTCGCTCTCTTCACAGTCCGTAAAACGATTGTGAAGGGGTGGATCAGC
GATGATTTTTGGCTGGAAGACACAAAGCTGTTCTTAAGGAAACTTGGGAC
AGTTTTGTGTCTCTCCCTAGAGTTCAAGGAAGATGCAGCAAGATGGTGGA
CAAGATTGCTGATCTTCTTTTCTCAATGATAGCCTGCCCAGAAGTCCGGA
AAGAAGACTGCCCCCCTCCCTTACCCCCAGGGTAAGGCTGGCGCTAAGAA
GGCTCCCAAGGTATGTGCTGACACCCTACATCAACTACTGAAACCACCAT
GAGAGAGATATATACTAACATGGTATGGATAGAACCCTCTCATCGAGAAG
CGCCCCCGCAACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCT
CGGTCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGA
AGATCTTGAACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAG
AACACCCTGGACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAA
GTACCGCCCCGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGG
CCACCGCCGTCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCC
TACAACGTCAAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAA
GAAGGCTTCCCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGG
TTGTCTTCCTTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATT
GTTAAGGGCAAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGGTATTTAT
CCCCTTATATATATCTCTCTACCCTCCAATAGCATTAAACTAATGAGTTG
GAATAGACCTCCGCTGTCCTCGCTCTCACCGAGGTCCGCTCCGAGGACAA
GGCTGAGTTCGCCAAGCTCCTCTCCGCCGTCAAGGAGGGCTACTCCGACA
AGTACGAGGAGTCCCGCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAG
GCTGTTGCCCGCCAGGAGAAGAAGCGCAAGGCCGTTGAGGGTGCCATCCG
TGTCTAA
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Coding sequence (CDS) from alignment at MCQH01000246:105440..106696+

>ATCC10864_010775-T1 ID=ATCC10864_010775-T1|Name=ATCC10864_010775-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3168bp|location=Sequence derived from alignment at MCQH01000246:105440..106696+ (Aspergillus niger ATCC 10864)
ATGCCTGCCCAGAAGTCCGGAAAGAAGACTGCCCCCCTCCCTTACCCCCA
GGGTAAGGCTGGCGCTAAGAAGGCTCCCAAGAACCCTCTCATCGAGAAGC
GCCCCCGCAACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCTC
GGTCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAA
GATCTTGAACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGA
ACACCCTGGACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAAG
TACCGCCCCGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGC
CACCGCCGTCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCT
ACAACGTCAAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAAG
AAGGCTTCCCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGGT
TGTCTTCCTTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATTG
TTAAGGGCAAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGACCTCCGCT
GTCCTCGCTCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAA
GCTCCTCTCCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCC
GCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAG
GAGAAGAAGCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAATGCCTGC
CCAGAAGTCCGGAAAGAAGACTGCCCCCCTCCCTTACCCCCAGGGTAAGG
CTGGCGCTAAGAAGGCTCCCAAGAACCCTCTCATCGAGAAGCGCCCCCGC
AACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGGTCGCTT
CGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGATCTTGA
ACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAACACCCTG
GACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTACCGCCC
CGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCACCGCCG
TCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACAACGTC
AAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTTC
CCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGGTTGTCTTCC
TTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTTAAGGGC
AAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGACCTCCGCTGTCCTCGC
TCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCT
CCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCAC
TGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAA
GCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAATGCCTGCCCAGAAGT
CCGGAAAGAAGACTGCCCCCCTCCCTTACCCCCAGGGTAAGGCTGGCGCT
AAGAAGGCTCCCAAGAACCCTCTCATCGAGAAGCGCCCCCGCAACTTCGG
CATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGGTCGCTTCGTCAAGT
GGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGATCTTGAACCTCCGT
CTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAACACCCTGGACCGCAA
CACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTACCGCCCCGAGACCA
AGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCACCGCCGTCGCTGAG
GGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACAACGTCAAGTACGG
TCTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTTCCCTCGTCC
TGATTGCTCACGACGTTGACCCCATTGAGCTGGTTGTCTTCCTTCCCGCT
CTTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTTAAGGGCAAGGCTCG
TCTCGGTACCGTTGTCCACAAGAAGACCTCCGCTGTCCTCGCTCTCACCG
AGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCTCCGCCGTC
AAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCACTGGGGTGG
TGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAAGCGCAAGG
CCGTTGAGGGTGCCATCCGTGTCTAAATGCCTGCCCAGAAGTCCGGAAAG
AAGACTGCCCCCCTCCCTTACCCCCAGGGTAAGGCTGGCGCTAAGAAGGC
TCCCAAGAACCCTCTCATCGAGAAGCGCCCCCGCAACTTCGGCATTGGCC
AGGACATCCAGCCCAAGCGCAACCTCGGTCGCTTCGTCAAGTGGCCCGAG
TATGTCCGTCTGCAGCGCCAGAAGAAGATCTTGAACCTCCGTCTCAAGGT
CCCTCCTTCCATTGCTCAGTTCCAGAACACCCTGGACCGCAACACCGCTG
CCCAGACCTTCAAGTTCCTCAACAAGTACCGCCCCGAGACCAAGGTCGAG
AAGAAGGAGCGTCTCCACGCCGAGGCCACCGCCGTCGCTGAGGGCAAGAA
GAAGGAGGATGTCTCCAAGAAGCCCTACAACGTCAAGTACGGTCTCAACC
ACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTTCCCTCGTCCTGATTGCT
CACGACGTTGACCCCATTGAGCTGGTTGTCTTCCTTCCCGCTCTTTGCCG
CAAGATGGGTGTCCCTTACGCTATTGTTAAGGGCAAGGCTCGTCTCGGTA
CCGTTGTCCACAAGAAGACCTCCGCTGTCCTCGCTCTCACCGAGGTCCGC
TCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCTCCGCCGTCAAGGAGGG
CTACTCCGACAAGTACGAGGAGTCCCGCCGCCACTGGGGTGGTGGTATCA
TGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAAGCGCAAGGCCGTTGAG
GGTGCCATCCGTGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:1990904ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL8ATCC10864_010775Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010775-T1.exon1ATCC10864_010775-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010775-T1.exon2ATCC10864_010775-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010775-T1.exon3ATCC10864_010775-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010775-T1.exon4ATCC10864_010775-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010775-T1.cdsATCC10864_010775-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010775-T1ATCC10864_010775-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01248
InterProIPR018492
InterProIPR001921
InterProIPR004038
InterProIPR004037
InterProIPR029064
Properties
Property NameValue
Product60S ribosomal protein L8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:105440..106696 +
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