|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000246:113539..115365- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_010778-T1 ID=ATCC10864_010778-T1|Name=ATCC10864_010778-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1827bp|location=Sequence derived from alignment at MCQH01000246:113539..115365- (Aspergillus niger ATCC 10864)
ATGCCTTCCCTCGAAAACCCCACCTTTCAGAATGAGGCTCGCTTGCTCCT
CGTCTCCAATCGGCTTCCAATCACGATCAAGCGATCGGATGACGGTCGCT
ATGACTTCTCCATGTCCTCCGGTGGCCTGGTCAGTGGACTAAGTGGCCTG
TCCAAATCCACAACCTTCCAATGGTACGGCTGGCCCGGTTTGGAGGTCCC
GGAGGAGGAGATTCCCGTGGTGAAGGAACGCTTGAAGCAGGAGTATAACG
CCGTGCCAGTGTTCATTGATGACGAGCTGGCAGACCGTCACTACAATGGC
TTTTCTAGTTAGTATTACCGATCTGCTTATCATGTCGAGGATCTGTGATT
GTTGCTCCCTCATTGATCCGTGCTGAAGGCGCTTGCTTGCTGACGGATAT
CCACTGCTCACAGACTCCATTCTCTGGCCCCTCTTCCATTACCATCCCGG
TGAGATTACCTTTGACGAGTCCGCCTGGGAAGCATACAAGGAGGCCAACC
GTCTTTTCGCCAAAGCGGTTGCGAAGGAAGTTCAAGATGGCGACTTGATC
TGGGTGCATGATTATCACTTGATGCTTCTCCCTGAGATGCTGCGTGAGGA
GATCGGCGATAGCAAGGAGAATGTCAAGATCGGCTTCTTCCTCCATACGC
CCTTCCCTAGCAGCGAGATCTACAGAATTCTCCCAGTCCGGAACGAGTTG
TTGCTCGGTGTCTTGCATTGCGACTTGATTGGGTTCCATACCTACGACTA
TACTAGGCACTTTTTGAGTGCTTGCTCGCGACTCTTGTATGTTTTGGATT
GACTAGATTCTGTCAGTGACTGAGGAGGCGCTAATCATGTGGATCTCTAG
GGGCTTAACAACTACGCCTAATGGGATCGAATTTCAGGGCAAGATCATTG
CCTGCGGTGCCTTCCCTATCGGTATCGACCCGGAGAAGTTTGAAGAGGGG
TTGAAGAAGGAGAAAGTCCAGAAACGCATTGCGATGCTGGAACAAAAATT
CCAGGGCGTGAAACTCATGGTGGGTGTGGACCGCCTGGATTACATCAAAG
GTGTCCCCCAGAAGTTACATGCCCTTGAGGTGTTCCTTAGCGATCATCCG
GAGTGGGTTGGCAAGGTTGTCCTGGTTCAGGTTGCTGTTCCTAGTCGACA
AGATGTGGAGGAATACCAGAACTTGAGGGCTGTTGTGAATGAGCTGGTGG
GCCGGATTAACGGCAAATTTGGTAGGTTTACCGCTGCTCATGGGCGACAC
CCTATCACTGACCGATGAGCAGGCACGGTTGAATTCATGCCTATCCATTT
CCTGCACAAGTCGGTCAACTTTGACGAGCTAATTGCCCTGTACGCGGTTT
CTGACGCCTGCATTGTTTCGTCAACCCGCGACGGGATGAACCTCGTCGCC
TATGAGTACATCGCCACTCAGAAAAAGCGTCATGGTGTCTTGGTGCTTTC
CGAGTTCGCGGGTGCTGCTCAGAGCCTTAACGGCAGTATCATCATAAACC
CCTGGAACACCGAAGAGCTGGCGGGTGCTTATCAGGAAGCGGTAACCATG
AGCGACGAGCAGAGAGCCCTCAACTTCTCCAAGCTCGACAAATATGTCAA
TAAATATACAAGGTTCGATCATATCTGAGATGGCGAGGAGCTTTGACACT
GACCTCATTTCTAGTGCATTCTGGGGCCAGTCCTTCGTGACAGAATTGAC
TCGCATATCGGAGCATTCGGCGGAGAAGTTCCATGCTAAGAAGGCTTCTT
TCAGCGACAACAACTCCGAGAACGGGGAACCTTCCAACGGTGTAGAGACT
CCGGCCCAGGAGCAGGTGGCACAGTGA back to topCoding sequence (CDS) from alignment at MCQH01000246:113539..115365- >ATCC10864_010778-T1 ID=ATCC10864_010778-T1|Name=ATCC10864_010778-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7770bp|location=Sequence derived from alignment at MCQH01000246:113539..115365- (Aspergillus niger ATCC 10864)
TGCATTCTGGGGCCAGTCCTTCGTGACAGAATTGACTCGCATATCGGAGC
ATTCGGCGGAGAAGTTCCATGCTAAGAAGGCTTCTTTCAGCGACAACAAC
TCCGAGAACGGGGAACCTTCCAACGGTGTAGAGACTCCGGCCCAGGAGCA
GGTGGCACAGTGAGCACGGTTGAATTCATGCCTATCCATTTCCTGCACAA
GTCGGTCAACTTTGACGAGCTAATTGCCCTGTACGCGGTTTCTGACGCCT
GCATTGTTTCGTCAACCCGCGACGGGATGAACCTCGTCGCCTATGAGTAC
ATCGCCACTCAGAAAAAGCGTCATGGTGTCTTGGTGCTTTCCGAGTTCGC
GGGTGCTGCTCAGAGCCTTAACGGCAGTATCATCATAAACCCCTGGAACA
CCGAAGAGCTGGCGGGTGCTTATCAGGAAGCGGTAACCATGAGCGACGAG
CAGAGAGCCCTCAACTTCTCCAAGCTCGACAAATATGTCAATAAATATAC
AAGGGGCTTAACAACTACGCCTAATGGGATCGAATTTCAGGGCAAGATCA
TTGCCTGCGGTGCCTTCCCTATCGGTATCGACCCGGAGAAGTTTGAAGAG
GGGTTGAAGAAGGAGAAAGTCCAGAAACGCATTGCGATGCTGGAACAAAA
ATTCCAGGGCGTGAAACTCATGGTGGGTGTGGACCGCCTGGATTACATCA
AAGGTGTCCCCCAGAAGTTACATGCCCTTGAGGTGTTCCTTAGCGATCAT
CCGGAGTGGGTTGGCAAGGTTGTCCTGGTTCAGGTTGCTGTTCCTAGTCG
ACAAGATGTGGAGGAATACCAGAACTTGAGGGCTGTTGTGAATGAGCTGG
TGGGCCGGATTAACGGCAAATTTGACTCCATTCTCTGGCCCCTCTTCCAT
TACCATCCCGGTGAGATTACCTTTGACGAGTCCGCCTGGGAAGCATACAA
GGAGGCCAACCGTCTTTTCGCCAAAGCGGTTGCGAAGGAAGTTCAAGATG
GCGACTTGATCTGGGTGCATGATTATCACTTGATGCTTCTCCCTGAGATG
CTGCGTGAGGAGATCGGCGATAGCAAGGAGAATGTCAAGATCGGCTTCTT
CCTCCATACGCCCTTCCCTAGCAGCGAGATCTACAGAATTCTCCCAGTCC
GGAACGAGTTGTTGCTCGGTGTCTTGCATTGCGACTTGATTGGGTTCCAT
ACCTACGACTATACTAGGCACTTTTTGAGTGCTTGCTCGCGACTCTTATG
CCTTCCCTCGAAAACCCCACCTTTCAGAATGAGGCTCGCTTGCTCCTCGT
CTCCAATCGGCTTCCAATCACGATCAAGCGATCGGATGACGGTCGCTATG
ACTTCTCCATGTCCTCCGGTGGCCTGGTCAGTGGACTAAGTGGCCTGTCC
AAATCCACAACCTTCCAATGGTACGGCTGGCCCGGTTTGGAGGTCCCGGA
GGAGGAGATTCCCGTGGTGAAGGAACGCTTGAAGCAGGAGTATAACGCCG
TGCCAGTGTTCATTGATGACGAGCTGGCAGACCGTCACTACAATGGCTTT
TCTATGCATTCTGGGGCCAGTCCTTCGTGACAGAATTGACTCGCATATCG
GAGCATTCGGCGGAGAAGTTCCATGCTAAGAAGGCTTCTTTCAGCGACAA
CAACTCCGAGAACGGGGAACCTTCCAACGGTGTAGAGACTCCGGCCCAGG
AGCAGGTGGCACAGTGAGCACGGTTGAATTCATGCCTATCCATTTCCTGC
ACAAGTCGGTCAACTTTGACGAGCTAATTGCCCTGTACGCGGTTTCTGAC
GCCTGCATTGTTTCGTCAACCCGCGACGGGATGAACCTCGTCGCCTATGA
GTACATCGCCACTCAGAAAAAGCGTCATGGTGTCTTGGTGCTTTCCGAGT
TCGCGGGTGCTGCTCAGAGCCTTAACGGCAGTATCATCATAAACCCCTGG
AACACCGAAGAGCTGGCGGGTGCTTATCAGGAAGCGGTAACCATGAGCGA
CGAGCAGAGAGCCCTCAACTTCTCCAAGCTCGACAAATATGTCAATAAAT
ATACAAGGGGCTTAACAACTACGCCTAATGGGATCGAATTTCAGGGCAAG
ATCATTGCCTGCGGTGCCTTCCCTATCGGTATCGACCCGGAGAAGTTTGA
AGAGGGGTTGAAGAAGGAGAAAGTCCAGAAACGCATTGCGATGCTGGAAC
AAAAATTCCAGGGCGTGAAACTCATGGTGGGTGTGGACCGCCTGGATTAC
ATCAAAGGTGTCCCCCAGAAGTTACATGCCCTTGAGGTGTTCCTTAGCGA
TCATCCGGAGTGGGTTGGCAAGGTTGTCCTGGTTCAGGTTGCTGTTCCTA
GTCGACAAGATGTGGAGGAATACCAGAACTTGAGGGCTGTTGTGAATGAG
CTGGTGGGCCGGATTAACGGCAAATTTGACTCCATTCTCTGGCCCCTCTT
CCATTACCATCCCGGTGAGATTACCTTTGACGAGTCCGCCTGGGAAGCAT
ACAAGGAGGCCAACCGTCTTTTCGCCAAAGCGGTTGCGAAGGAAGTTCAA
GATGGCGACTTGATCTGGGTGCATGATTATCACTTGATGCTTCTCCCTGA
GATGCTGCGTGAGGAGATCGGCGATAGCAAGGAGAATGTCAAGATCGGCT
TCTTCCTCCATACGCCCTTCCCTAGCAGCGAGATCTACAGAATTCTCCCA
GTCCGGAACGAGTTGTTGCTCGGTGTCTTGCATTGCGACTTGATTGGGTT
CCATACCTACGACTATACTAGGCACTTTTTGAGTGCTTGCTCGCGACTCT
TATGCCTTCCCTCGAAAACCCCACCTTTCAGAATGAGGCTCGCTTGCTCC
TCGTCTCCAATCGGCTTCCAATCACGATCAAGCGATCGGATGACGGTCGC
TATGACTTCTCCATGTCCTCCGGTGGCCTGGTCAGTGGACTAAGTGGCCT
GTCCAAATCCACAACCTTCCAATGGTACGGCTGGCCCGGTTTGGAGGTCC
CGGAGGAGGAGATTCCCGTGGTGAAGGAACGCTTGAAGCAGGAGTATAAC
GCCGTGCCAGTGTTCATTGATGACGAGCTGGCAGACCGTCACTACAATGG
CTTTTCTATGCATTCTGGGGCCAGTCCTTCGTGACAGAATTGACTCGCAT
ATCGGAGCATTCGGCGGAGAAGTTCCATGCTAAGAAGGCTTCTTTCAGCG
ACAACAACTCCGAGAACGGGGAACCTTCCAACGGTGTAGAGACTCCGGCC
CAGGAGCAGGTGGCACAGTGAGCACGGTTGAATTCATGCCTATCCATTTC
CTGCACAAGTCGGTCAACTTTGACGAGCTAATTGCCCTGTACGCGGTTTC
TGACGCCTGCATTGTTTCGTCAACCCGCGACGGGATGAACCTCGTCGCCT
ATGAGTACATCGCCACTCAGAAAAAGCGTCATGGTGTCTTGGTGCTTTCC
GAGTTCGCGGGTGCTGCTCAGAGCCTTAACGGCAGTATCATCATAAACCC
CTGGAACACCGAAGAGCTGGCGGGTGCTTATCAGGAAGCGGTAACCATGA
GCGACGAGCAGAGAGCCCTCAACTTCTCCAAGCTCGACAAATATGTCAAT
AAATATACAAGGGGCTTAACAACTACGCCTAATGGGATCGAATTTCAGGG
CAAGATCATTGCCTGCGGTGCCTTCCCTATCGGTATCGACCCGGAGAAGT
TTGAAGAGGGGTTGAAGAAGGAGAAAGTCCAGAAACGCATTGCGATGCTG
GAACAAAAATTCCAGGGCGTGAAACTCATGGTGGGTGTGGACCGCCTGGA
TTACATCAAAGGTGTCCCCCAGAAGTTACATGCCCTTGAGGTGTTCCTTA
GCGATCATCCGGAGTGGGTTGGCAAGGTTGTCCTGGTTCAGGTTGCTGTT
CCTAGTCGACAAGATGTGGAGGAATACCAGAACTTGAGGGCTGTTGTGAA
TGAGCTGGTGGGCCGGATTAACGGCAAATTTGACTCCATTCTCTGGCCCC
TCTTCCATTACCATCCCGGTGAGATTACCTTTGACGAGTCCGCCTGGGAA
GCATACAAGGAGGCCAACCGTCTTTTCGCCAAAGCGGTTGCGAAGGAAGT
TCAAGATGGCGACTTGATCTGGGTGCATGATTATCACTTGATGCTTCTCC
CTGAGATGCTGCGTGAGGAGATCGGCGATAGCAAGGAGAATGTCAAGATC
GGCTTCTTCCTCCATACGCCCTTCCCTAGCAGCGAGATCTACAGAATTCT
CCCAGTCCGGAACGAGTTGTTGCTCGGTGTCTTGCATTGCGACTTGATTG
GGTTCCATACCTACGACTATACTAGGCACTTTTTGAGTGCTTGCTCGCGA
CTCTTATGCCTTCCCTCGAAAACCCCACCTTTCAGAATGAGGCTCGCTTG
CTCCTCGTCTCCAATCGGCTTCCAATCACGATCAAGCGATCGGATGACGG
TCGCTATGACTTCTCCATGTCCTCCGGTGGCCTGGTCAGTGGACTAAGTG
GCCTGTCCAAATCCACAACCTTCCAATGGTACGGCTGGCCCGGTTTGGAG
GTCCCGGAGGAGGAGATTCCCGTGGTGAAGGAACGCTTGAAGCAGGAGTA
TAACGCCGTGCCAGTGTTCATTGATGACGAGCTGGCAGACCGTCACTACA
ATGGCTTTTCTATGCATTCTGGGGCCAGTCCTTCGTGACAGAATTGACTC
GCATATCGGAGCATTCGGCGGAGAAGTTCCATGCTAAGAAGGCTTCTTTC
AGCGACAACAACTCCGAGAACGGGGAACCTTCCAACGGTGTAGAGACTCC
GGCCCAGGAGCAGGTGGCACAGTGAGCACGGTTGAATTCATGCCTATCCA
TTTCCTGCACAAGTCGGTCAACTTTGACGAGCTAATTGCCCTGTACGCGG
TTTCTGACGCCTGCATTGTTTCGTCAACCCGCGACGGGATGAACCTCGTC
GCCTATGAGTACATCGCCACTCAGAAAAAGCGTCATGGTGTCTTGGTGCT
TTCCGAGTTCGCGGGTGCTGCTCAGAGCCTTAACGGCAGTATCATCATAA
ACCCCTGGAACACCGAAGAGCTGGCGGGTGCTTATCAGGAAGCGGTAACC
ATGAGCGACGAGCAGAGAGCCCTCAACTTCTCCAAGCTCGACAAATATGT
CAATAAATATACAAGGGGCTTAACAACTACGCCTAATGGGATCGAATTTC
AGGGCAAGATCATTGCCTGCGGTGCCTTCCCTATCGGTATCGACCCGGAG
AAGTTTGAAGAGGGGTTGAAGAAGGAGAAAGTCCAGAAACGCATTGCGAT
GCTGGAACAAAAATTCCAGGGCGTGAAACTCATGGTGGGTGTGGACCGCC
TGGATTACATCAAAGGTGTCCCCCAGAAGTTACATGCCCTTGAGGTGTTC
CTTAGCGATCATCCGGAGTGGGTTGGCAAGGTTGTCCTGGTTCAGGTTGC
TGTTCCTAGTCGACAAGATGTGGAGGAATACCAGAACTTGAGGGCTGTTG
TGAATGAGCTGGTGGGCCGGATTAACGGCAAATTTGACTCCATTCTCTGG
CCCCTCTTCCATTACCATCCCGGTGAGATTACCTTTGACGAGTCCGCCTG
GGAAGCATACAAGGAGGCCAACCGTCTTTTCGCCAAAGCGGTTGCGAAGG
AAGTTCAAGATGGCGACTTGATCTGGGTGCATGATTATCACTTGATGCTT
CTCCCTGAGATGCTGCGTGAGGAGATCGGCGATAGCAAGGAGAATGTCAA
GATCGGCTTCTTCCTCCATACGCCCTTCCCTAGCAGCGAGATCTACAGAA
TTCTCCCAGTCCGGAACGAGTTGTTGCTCGGTGTCTTGCATTGCGACTTG
ATTGGGTTCCATACCTACGACTATACTAGGCACTTTTTGAGTGCTTGCTC
GCGACTCTTATGCCTTCCCTCGAAAACCCCACCTTTCAGAATGAGGCTCG
CTTGCTCCTCGTCTCCAATCGGCTTCCAATCACGATCAAGCGATCGGATG
ACGGTCGCTATGACTTCTCCATGTCCTCCGGTGGCCTGGTCAGTGGACTA
AGTGGCCTGTCCAAATCCACAACCTTCCAATGGTACGGCTGGCCCGGTTT
GGAGGTCCCGGAGGAGGAGATTCCCGTGGTGAAGGAACGCTTGAAGCAGG
AGTATAACGCCGTGCCAGTGTTCATTGATGACGAGCTGGCAGACCGTCAC
TACAATGGCTTTTCTATGCATTCTGGGGCCAGTCCTTCGTGACAGAATTG
ACTCGCATATCGGAGCATTCGGCGGAGAAGTTCCATGCTAAGAAGGCTTC
TTTCAGCGACAACAACTCCGAGAACGGGGAACCTTCCAACGGTGTAGAGA
CTCCGGCCCAGGAGCAGGTGGCACAGTGAGCACGGTTGAATTCATGCCTA
TCCATTTCCTGCACAAGTCGGTCAACTTTGACGAGCTAATTGCCCTGTAC
GCGGTTTCTGACGCCTGCATTGTTTCGTCAACCCGCGACGGGATGAACCT
CGTCGCCTATGAGTACATCGCCACTCAGAAAAAGCGTCATGGTGTCTTGG
TGCTTTCCGAGTTCGCGGGTGCTGCTCAGAGCCTTAACGGCAGTATCATC
ATAAACCCCTGGAACACCGAAGAGCTGGCGGGTGCTTATCAGGAAGCGGT
AACCATGAGCGACGAGCAGAGAGCCCTCAACTTCTCCAAGCTCGACAAAT
ATGTCAATAAATATACAAGGGGCTTAACAACTACGCCTAATGGGATCGAA
TTTCAGGGCAAGATCATTGCCTGCGGTGCCTTCCCTATCGGTATCGACCC
GGAGAAGTTTGAAGAGGGGTTGAAGAAGGAGAAAGTCCAGAAACGCATTG
CGATGCTGGAACAAAAATTCCAGGGCGTGAAACTCATGGTGGGTGTGGAC
CGCCTGGATTACATCAAAGGTGTCCCCCAGAAGTTACATGCCCTTGAGGT
GTTCCTTAGCGATCATCCGGAGTGGGTTGGCAAGGTTGTCCTGGTTCAGG
TTGCTGTTCCTAGTCGACAAGATGTGGAGGAATACCAGAACTTGAGGGCT
GTTGTGAATGAGCTGGTGGGCCGGATTAACGGCAAATTTGACTCCATTCT
CTGGCCCCTCTTCCATTACCATCCCGGTGAGATTACCTTTGACGAGTCCG
CCTGGGAAGCATACAAGGAGGCCAACCGTCTTTTCGCCAAAGCGGTTGCG
AAGGAAGTTCAAGATGGCGACTTGATCTGGGTGCATGATTATCACTTGAT
GCTTCTCCCTGAGATGCTGCGTGAGGAGATCGGCGATAGCAAGGAGAATG
TCAAGATCGGCTTCTTCCTCCATACGCCCTTCCCTAGCAGCGAGATCTAC
AGAATTCTCCCAGTCCGGAACGAGTTGTTGCTCGGTGTCTTGCATTGCGA
CTTGATTGGGTTCCATACCTACGACTATACTAGGCACTTTTTGAGTGCTT
GCTCGCGACTCTTATGCCTTCCCTCGAAAACCCCACCTTTCAGAATGAGG
CTCGCTTGCTCCTCGTCTCCAATCGGCTTCCAATCACGATCAAGCGATCG
GATGACGGTCGCTATGACTTCTCCATGTCCTCCGGTGGCCTGGTCAGTGG
ACTAAGTGGCCTGTCCAAATCCACAACCTTCCAATGGTACGGCTGGCCCG
GTTTGGAGGTCCCGGAGGAGGAGATTCCCGTGGTGAAGGAACGCTTGAAG
CAGGAGTATAACGCCGTGCCAGTGTTCATTGATGACGAGCTGGCAGACCG
TCACTACAATGGCTTTTCTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005992 | trehalose biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003825 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00982 |
| InterPro | IPR012766 |
| InterPro | IPR001830 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT20 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000246 | supercontig | MCQH01000246:113539..115365 - |
|
