You are here

Home

ATCC10864_010782-T1, ATCC10864_010782-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010782-T1
Unique NameATCC10864_010782-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:125228..126309-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010782-T1 ID=ATCC10864_010782-T1|Name=ATCC10864_010782-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1082bp|location=Sequence derived from alignment at MCQH01000246:125228..126309- (Aspergillus niger ATCC 10864)
ATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCAT
CATCGGCAATCCCCTCGATGTCATCAAAGTGCGGTTGCAGGCAGGAAGCA
CTCCAGATGTCGCCGCCTCAACCACATCCCAGCAACTGAGTCGCTTTGAT
AGCGCTACTTCTCTTGTTCGAGGTTTGCAAATCTTCCGATCATGTAAATT
ACGCGTCTAGTATTAACCGTTTCACCAGGCGCCGCTGCACCAATACTCGG
ATATGGGGCCCTCAATGCACTACTCTTTGTGGCTTATAACCGATCCTTGA
AGTTCCTGGATAGTTCAATCATTGACCCTACAAACCCACAAGGTGTCCCC
TTAAGCAAGATCTGGCTTGCCGGTGCGGCAGGCGGGGTGGCCAGCTGGAC
TGTGTCATCTCCGACGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCAC
GACCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGC
GGCTGGACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGC
AATTGGCTATGGGTTTTAGTATGTGAATCCCTTCCCCGGATCATCCCCCG
CTATTTCATTGCGGCTCTTCACGGAGTATTGACATACATTCTTCTCTGCA
GCTTTTGGTCTTACGAGTACTGCAAGCGGCTTACGGCCTCTAATGACGAT
GATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGTGGTATTGCTGG
AATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGATCAAGACAAGAC
TGCAGGCGAGGACGATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAG
CCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATTGCCAAAGAAGC
TTATCTCAATGAAGGACTCAAAGCTTTCTATCGTGGCCTAGGAGTTTGTA
GTGTGAGGGCCTTCATAGTCAATGCTGTTCAGGTATGTTAATCTGAGCTT
GAAATGTTGTACCGCATTGCTAACGATCCATTCCAAGTGGGCGGCATACG
AGTGGCTGATGAAGTATTTACAAAATCCATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000246:125228..126309-

>ATCC10864_010782-T1 ID=ATCC10864_010782-T1|Name=ATCC10864_010782-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3552bp|location=Sequence derived from alignment at MCQH01000246:125228..126309- (Aspergillus niger ATCC 10864)
TGGGCGGCATACGAGTGGCTGATGAAGTATTTACAAAATCCATAACTTTT
GGTCTTACGAGTACTGCAAGCGGCTTACGGCCTCTAATGACGATGATGCG
ACCATGACTGCTACGAAAGTCTTATTATGCGGTGGTATTGCTGGAATTGT
TACCTGGGCATCTGTCTTCCCATTAGATGTGATCAAGACAAGACTGCAGG
CGAGGACGATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCA
GCCAAGCCATACACCGCAAGCTCCATTCAAATTGCCAAAGAAGCTTATCT
CAATGAAGGACTCAAAGCTTTCTATCGTGGCCTAGGAGTTTGTAGTGTGA
GGGCCTTCATAGTCAATGCTGTTCAGGCGCCGCTGCACCAATACTCGGAT
ATGGGGCCCTCAATGCACTACTCTTTGTGGCTTATAACCGATCCTTGAAG
TTCCTGGATAGTTCAATCATTGACCCTACAAACCCACAAGGTGTCCCCTT
AAGCAAGATCTGGCTTGCCGGTGCGGCAGGCGGGGTGGCCAGCTGGACTG
TGTCATCTCCGACGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCACGA
CCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGG
CTGGACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAA
TTGGCTATGGGTTTTAATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCG
GTGCCATTGGAATCATCATCGGCAATCCCCTCGATGTCATCAAAGTGCGG
TTGCAGGCAGGAAGCACTCCAGATGTCGCCGCCTCAACCACATCCCAGCA
ACTGAGTCGCTTTGATAGCGCTACTTCTCTTGTTCGAGTGGGCGGCATAC
GAGTGGCTGATGAAGTATTTACAAAATCCATAACTTTTGGTCTTACGAGT
ACTGCAAGCGGCTTACGGCCTCTAATGACGATGATGCGACCATGACTGCT
ACGAAAGTCTTATTATGCGGTGGTATTGCTGGAATTGTTACCTGGGCATC
TGTCTTCCCATTAGATGTGATCAAGACAAGACTGCAGGCGAGGACGATTG
AATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATAC
ACCGCAAGCTCCATTCAAATTGCCAAAGAAGCTTATCTCAATGAAGGACT
CAAAGCTTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTCATAG
TCAATGCTGTTCAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCA
ATGCACTACTCTTTGTGGCTTATAACCGATCCTTGAAGTTCCTGGATAGT
TCAATCATTGACCCTACAAACCCACAAGGTGTCCCCTTAAGCAAGATCTG
GCTTGCCGGTGCGGCAGGCGGGGTGGCCAGCTGGACTGTGTCATCTCCGA
CGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCACGACCCGGGGTGTCG
TCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGGACGGGCCT
TTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGT
TTTAATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAA
TCATCATCGGCAATCCCCTCGATGTCATCAAAGTGCGGTTGCAGGCAGGA
AGCACTCCAGATGTCGCCGCCTCAACCACATCCCAGCAACTGAGTCGCTT
TGATAGCGCTACTTCTCTTGTTCGAGTGGGCGGCATACGAGTGGCTGATG
AAGTATTTACAAAATCCATAACTTTTGGTCTTACGAGTACTGCAAGCGGC
TTACGGCCTCTAATGACGATGATGCGACCATGACTGCTACGAAAGTCTTA
TTATGCGGTGGTATTGCTGGAATTGTTACCTGGGCATCTGTCTTCCCATT
AGATGTGATCAAGACAAGACTGCAGGCGAGGACGATTGAATTGTCCCCAG
AACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCC
ATTCAAATTGCCAAAGAAGCTTATCTCAATGAAGGACTCAAAGCTTTCTA
TCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTCATAGTCAATGCTGTTC
AGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGCACTACTCT
TTGTGGCTTATAACCGATCCTTGAAGTTCCTGGATAGTTCAATCATTGAC
CCTACAAACCCACAAGGTGTCCCCTTAAGCAAGATCTGGCTTGCCGGTGC
GGCAGGCGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCA
AATGTAGGGCCCAGCTTGACTCACGACCCGGGGTGTCGTCATGGACAGTT
GCAAAAGACATTGTCCGAACACGCGGCTGGACGGGCCTTTATTACGGAGG
AGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTAATGTCTTC
CGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCA
ATCCCCTCGATGTCATCAAAGTGCGGTTGCAGGCAGGAAGCACTCCAGAT
GTCGCCGCCTCAACCACATCCCAGCAACTGAGTCGCTTTGATAGCGCTAC
TTCTCTTGTTCGAGTGGGCGGCATACGAGTGGCTGATGAAGTATTTACAA
AATCCATAACTTTTGGTCTTACGAGTACTGCAAGCGGCTTACGGCCTCTA
ATGACGATGATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGTGGT
ATTGCTGGAATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGATCAA
GACAAGACTGCAGGCGAGGACGATTGAATTGTCCCCAGAACATCGCCCCT
TGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATTGCC
AAAGAAGCTTATCTCAATGAAGGACTCAAAGCTTTCTATCGTGGCCTAGG
AGTTTGTAGTGTGAGGGCCTTCATAGTCAATGCTGTTCAGGCGCCGCTGC
ACCAATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGTGGCTTATA
ACCGATCCTTGAAGTTCCTGGATAGTTCAATCATTGACCCTACAAACCCA
CAAGGTGTCCCCTTAAGCAAGATCTGGCTTGCCGGTGCGGCAGGCGGGGT
GGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATGTAGGGCCC
AGCTTGACTCACGACCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATT
GTCCGAACACGCGGCTGGACGGGCCTTTATTACGGAGGAGGGGTCACTTG
TGCTAGAGATGCAATTGGCTATGGGTTTTAATGTCTTCCGACTTCTGGGC
TGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCCCCTCGATG
TCATCAAAGTGCGGTTGCAGGCAGGAAGCACTCCAGATGTCGCCGCCTCA
ACCACATCCCAGCAACTGAGTCGCTTTGATAGCGCTACTTCTCTTGTTCG
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010782ATCC10864_010782Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010782-T1ATCC10864_010782-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010782-T1.cdsATCC10864_010782-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010782-T1.exon4ATCC10864_010782-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_010782-T1.exon3ATCC10864_010782-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010782-T1.exon2ATCC10864_010782-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010782-T1.exon1ATCC10864_010782-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR023395
InterProIPR002067
PFAMPF00153
InterProIPR018108
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:125228..126309 -
Powered by Drupal