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ATCC10864_010851-T1, ATCC10864_010851-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010851-T1
Unique NameATCC10864_010851-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:366024..367843-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010851-T1 ID=ATCC10864_010851-T1|Name=ATCC10864_010851-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1820bp|location=Sequence derived from alignment at MCQH01000246:366024..367843- (Aspergillus niger ATCC 10864)
ATGGCAGATGATGAAGTCATGCGAAATGGGGTTGATGGCAGTCCCAACAA
TGAGGTACAAAATGCCGATCCTAAAGGTACTCTGGATGCCAGTGACTTAG
GAAAAGGTTCACCCATGGATCCAGAGTCAGACGAAGATGTACCAGTTGAG
GCAGAGGAGCTTCAGGACGCTCTCACACGGGCGCCGCCGGTCAACAGCAG
CTACCTACCCCTCCCTTGGAAGGGACGACTAGGTTATGTAAGTTTGCATC
ATCATTCTTTCAAACCAATCCTTATGCTGTATAGGCATGTCTGAATACGT
ATCTACGATATGCGACCCCGCCCGTTTTCTGCTCCCGGACTTGCCGCATT
GCCTCCATCCTGGAAAACAGACATCCACTCTCGGATCCTTCGCAGCCCCC
TCATCCGACCAAAAACCGTCCTGATCGTGATCAGCCCGCTGATGTCGCGC
GCGGTCAGGCGTATGTTGAGGCTATAGGCCTCACCAATGCTCGCGATCTC
GTCAAAATGCTGCGCTGGAATGACCGCTACGGAATCAAGTTCATGCGATT
GAGCAGCGAGATGTTTCCATTTGCGAGCCACAAGGAGTACGGCTACAAGT
TGGCTCCCTTTGCCTCTGAAGTACTGGCAGAAGCTGGTCGTGTCGTTGCC
GAGCTCGGTCATCGCGTGAGCGTTCATCCCGGTCAATTCACGCAACTGGG
CTCTCCTAAGGACGAAGTAGTGGAAAGCTCCATTCGAGATCTGGAATACC
ACTCGGAAATGCTCCAGTTGCTCCAGCTGCCACCTCAACAGGATAGGGAT
GCTGTTATGATTCTGCACATGGGCGGCGTCTTTGGTGACAAAGAAGCCAC
TCTTGACCGGTTTAGAGAGAATTATCGAGGCCTATCGCAGGACATCAAAA
ATCGGCTTGTCTTGGAGAACGACGATGTCAGCTGGTCGGTTCACGACCTC
CTGCCCATTTGTGAAGAACTGAACATACCCCTGGTACTCGACTTCCACCA
CCACAATATCATCTTTGATTCGAGCCAGCTCCGCGAGGGCACACTGGACA
TCATGTCCTTGTTTGATCGGATCAAGGCGACATGGACCCGGAAGGGCATC
ACGCAGAAGATGCACTATTCTGAGCCAGAACCATCTGCCATCACAAACCG
CCAACGTCGGAAGCATAGCCCCCGGGTCTCCACTCTTCCACCGTGCGATC
CCACCATGGATCTGATGATCGAGGCCAAGGACAAGGAGCAAGCTGTTTTC
GAATTGATGCGGACATTTAAGCTGCCGGGTCACGAACTTGTCAACGATAT
CATTCCTCACGTGCGTAATGACGAAAACAGGCCACATAAGCCGCCGAGGA
AGACCAAGAAGAACGGGGGTTTTGTGGATCTGGAGGGACTGGTCCCACCT
CCTCAGACTGTCCCTGAAGAAGAAGTGGGCATGGGTGGTCCGGAGGGACG
GGTCTACTGGCCTCCTGGCATGGAGGAATGGCTTCGACCGAAGAAGATTG
TTCGCACCAAAGCCATCCAGAGCCCTCGCCGCACTCCTTCCACGAAGAAA
GTAGCGGTCGAAAATGGCGATTCTGTACCACAGGAAGAACCGGATGGAAG
CGCGCTAGCTACGCCGGTGTCAAAGAAGAAGACACCTAATGTAAAGAAAC
CGGTCTCCAGGAAGCGGAAAGCTTCTCCGGCGACTACACCGTCAGCTTCA
GATGAAGAAGCACCCGAAATCCCAGAGAGGCCGACTCTTAAGCGATCCCA
GAGCAGTGGTGTTCGTCGAAGCCGACGAGCAAAGAAGGTGGACTACGCCG
AAGATGAAGACTCGGTCTGA
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Coding sequence (CDS) from alignment at MCQH01000246:366024..367843-

>ATCC10864_010851-T1 ID=ATCC10864_010851-T1|Name=ATCC10864_010851-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3546bp|location=Sequence derived from alignment at MCQH01000246:366024..367843- (Aspergillus niger ATCC 10864)
GCATGTCTGAATACGTATCTACGATATGCGACCCCGCCCGTTTTCTGCTC
CCGGACTTGCCGCATTGCCTCCATCCTGGAAAACAGACATCCACTCTCGG
ATCCTTCGCAGCCCCCTCATCCGACCAAAAACCGTCCTGATCGTGATCAG
CCCGCTGATGTCGCGCGCGGTCAGGCGTATGTTGAGGCTATAGGCCTCAC
CAATGCTCGCGATCTCGTCAAAATGCTGCGCTGGAATGACCGCTACGGAA
TCAAGTTCATGCGATTGAGCAGCGAGATGTTTCCATTTGCGAGCCACAAG
GAGTACGGCTACAAGTTGGCTCCCTTTGCCTCTGAAGTACTGGCAGAAGC
TGGTCGTGTCGTTGCCGAGCTCGGTCATCGCGTGAGCGTTCATCCCGGTC
AATTCACGCAACTGGGCTCTCCTAAGGACGAAGTAGTGGAAAGCTCCATT
CGAGATCTGGAATACCACTCGGAAATGCTCCAGTTGCTCCAGCTGCCACC
TCAACAGGATAGGGATGCTGTTATGATTCTGCACATGGGCGGCGTCTTTG
GTGACAAAGAAGCCACTCTTGACCGGTTTAGAGAGAATTATCGAGGCCTA
TCGCAGGACATCAAAAATCGGCTTGTCTTGGAGAACGACGATGTCAGCTG
GTCGGTTCACGACCTCCTGCCCATTTGTGAAGAACTGAACATACCCCTGG
TACTCGACTTCCACCACCACAATATCATCTTTGATTCGAGCCAGCTCCGC
GAGGGCACACTGGACATCATGTCCTTGTTTGATCGGATCAAGGCGACATG
GACCCGGAAGGGCATCACGCAGAAGATGCACTATTCTGAGCCAGAACCAT
CTGCCATCACAAACCGCCAACGTCGGAAGCATAGCCCCCGGGTCTCCACT
CTTCCACCGTGCGATCCCACCATGGATCTGATGATCGAGGCCAAGGACAA
GGAGCAAGCTGTTTTCGAATTGATGCGGACATTTAAGCTGCCGGGTCACG
AACTTGTCAACGATATCATTCCTCACGTGCGTAATGACGAAAACAGGCCA
CATAAGCCGCCGAGGAAGACCAAGAAGAACGGGGGTTTTGTGGATCTGGA
GGGACTGGTCCCACCTCCTCAGACTGTCCCTGAAGAAGAAGTGGGCATGG
GTGGTCCGGAGGGACGGGTCTACTGGCCTCCTGGCATGGAGGAATGGCTT
CGACCGAAGAAGATTGTTCGCACCAAAGCCATCCAGAGCCCTCGCCGCAC
TCCTTCCACGAAGAAAGTAGCGGTCGAAAATGGCGATTCTGTACCACAGG
AAGAACCGGATGGAAGCGCGCTAGCTACGCCGGTGTCAAAGAAGAAGACA
CCTAATGTAAAGAAACCGGTCTCCAGGAAGCGGAAAGCTTCTCCGGCGAC
TACACCGTCAGCTTCAGATGAAGAAGCACCCGAAATCCCAGAGAGGCCGA
CTCTTAAGCGATCCCAGAGCAGTGGTGTTCGTCGAAGCCGACGAGCAAAG
AAGGTGGACTACGCCGAAGATGAAGACTCGGTCTGAATGGCAGATGATGA
AGTCATGCGAAATGGGGTTGATGGCAGTCCCAACAATGAGGTACAAAATG
CCGATCCTAAAGGTACTCTGGATGCCAGTGACTTAGGAAAAGGTTCACCC
ATGGATCCAGAGTCAGACGAAGATGTACCAGTTGAGGCAGAGGAGCTTCA
GGACGCTCTCACACGGGCGCCGCCGGTCAACAGCAGCTACCTACCCCTCC
CTTGGAAGGGACGACTAGGTTATGCATGTCTGAATACGTATCTACGATAT
GCGACCCCGCCCGTTTTCTGCTCCCGGACTTGCCGCATTGCCTCCATCCT
GGAAAACAGACATCCACTCTCGGATCCTTCGCAGCCCCCTCATCCGACCA
AAAACCGTCCTGATCGTGATCAGCCCGCTGATGTCGCGCGCGGTCAGGCG
TATGTTGAGGCTATAGGCCTCACCAATGCTCGCGATCTCGTCAAAATGCT
GCGCTGGAATGACCGCTACGGAATCAAGTTCATGCGATTGAGCAGCGAGA
TGTTTCCATTTGCGAGCCACAAGGAGTACGGCTACAAGTTGGCTCCCTTT
GCCTCTGAAGTACTGGCAGAAGCTGGTCGTGTCGTTGCCGAGCTCGGTCA
TCGCGTGAGCGTTCATCCCGGTCAATTCACGCAACTGGGCTCTCCTAAGG
ACGAAGTAGTGGAAAGCTCCATTCGAGATCTGGAATACCACTCGGAAATG
CTCCAGTTGCTCCAGCTGCCACCTCAACAGGATAGGGATGCTGTTATGAT
TCTGCACATGGGCGGCGTCTTTGGTGACAAAGAAGCCACTCTTGACCGGT
TTAGAGAGAATTATCGAGGCCTATCGCAGGACATCAAAAATCGGCTTGTC
TTGGAGAACGACGATGTCAGCTGGTCGGTTCACGACCTCCTGCCCATTTG
TGAAGAACTGAACATACCCCTGGTACTCGACTTCCACCACCACAATATCA
TCTTTGATTCGAGCCAGCTCCGCGAGGGCACACTGGACATCATGTCCTTG
TTTGATCGGATCAAGGCGACATGGACCCGGAAGGGCATCACGCAGAAGAT
GCACTATTCTGAGCCAGAACCATCTGCCATCACAAACCGCCAACGTCGGA
AGCATAGCCCCCGGGTCTCCACTCTTCCACCGTGCGATCCCACCATGGAT
CTGATGATCGAGGCCAAGGACAAGGAGCAAGCTGTTTTCGAATTGATGCG
GACATTTAAGCTGCCGGGTCACGAACTTGTCAACGATATCATTCCTCACG
TGCGTAATGACGAAAACAGGCCACATAAGCCGCCGAGGAAGACCAAGAAG
AACGGGGGTTTTGTGGATCTGGAGGGACTGGTCCCACCTCCTCAGACTGT
CCCTGAAGAAGAAGTGGGCATGGGTGGTCCGGAGGGACGGGTCTACTGGC
CTCCTGGCATGGAGGAATGGCTTCGACCGAAGAAGATTGTTCGCACCAAA
GCCATCCAGAGCCCTCGCCGCACTCCTTCCACGAAGAAAGTAGCGGTCGA
AAATGGCGATTCTGTACCACAGGAAGAACCGGATGGAAGCGCGCTAGCTA
CGCCGGTGTCAAAGAAGAAGACACCTAATGTAAAGAAACCGGTCTCCAGG
AAGCGGAAAGCTTCTCCGGCGACTACACCGTCAGCTTCAGATGAAGAAGC
ACCCGAAATCCCAGAGAGGCCGACTCTTAAGCGATCCCAGAGCAGTGGTG
TTCGTCGAAGCCGACGAGCAAAGAAGGTGGACTACGCCGAAGATGAAGAC
TCGGTCTGAATGGCAGATGATGAAGTCATGCGAAATGGGGTTGATGGCAG
TCCCAACAATGAGGTACAAAATGCCGATCCTAAAGGTACTCTGGATGCCA
GTGACTTAGGAAAAGGTTCACCCATGGATCCAGAGTCAGACGAAGATGTA
CCAGTTGAGGCAGAGGAGCTTCAGGACGCTCTCACACGGGCGCCGCCGGT
CAACAGCAGCTACCTACCCCTCCCTTGGAAGGGACGACTAGGTTAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004519endonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0009411response to UV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS18ATCC10864_010851Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010851-T1ATCC10864_010851-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010851-T1.cdsATCC10864_010851-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010851-T1.exon2ATCC10864_010851-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010851-T1.exon1ATCC10864_010851-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036237
PFAMPF03851
InterProIPR004601
Properties
Property NameValue
NoteantiSMASH:Cluster_1000246.1
ProductUV-damage endonuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:366024..367843 -
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