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ATCC10864_010971-T1, ATCC10864_010971-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010971-T1
Unique NameATCC10864_010971-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:695195..696732-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010971-T1 ID=ATCC10864_010971-T1|Name=ATCC10864_010971-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1538bp|location=Sequence derived from alignment at MCQH01000246:695195..696732- (Aspergillus niger ATCC 10864)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTTTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGTGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATTCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGGTGAGCTACAGACCACTCTAGCGACTGTCAAGTCACATACAC
TAACAATATTGATTTAGATAACCTTGGTGCCATCCTGGCCGTCGCAGATG
TCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACA
ATGCAGCAGGTTCTGGAGGCCCTGATCAAGGCGTATGAGATTCAGGGCTG
CTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTGGACCACACCATCC
TGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCC
CGCGAGCAAGCCCTTAGTGCCGTATCTCACGCCTGGATGGACGGCCACCC
ACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGCTGGG
CAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAG
GCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTT
CTACGATGTACTGTTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTG
GCACCTGGGTCATTGAAACGGTGCTGTTTAAGGTGAACACGGCCGAGGGC
CATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCG
GGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGA
CCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGCGCAACTTTGCAT
AACGCCGCAGATCGTGACCACTGCCTGCGGTACATGGTCGCTGTGGTGCT
GCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGTCCCT
GGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCA
GAAGACCCCAAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGT
GGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAG
TGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAG
GAGGTTTACGCAAAATCAGAGCGGAATCTGGGTCTTCGACTGTCGACAGA
TAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGC
TACCAGCATGCCATTTTGTGAACCTTTTCAGTTTGTAA
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Coding sequence (CDS) from alignment at MCQH01000246:695195..696732-

>ATCC10864_010971-T1 ID=ATCC10864_010971-T1|Name=ATCC10864_010971-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2958bp|location=Sequence derived from alignment at MCQH01000246:695195..696732- (Aspergillus niger ATCC 10864)
ATAACCTTGGTGCCATCCTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCC
CTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGCAGGTTCTGGA
GGCCCTGATCAAGGCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATG
CCTTCAACAAAGTCGGGTTGGACCACACCATCCTGGTCAAGATTGGCGCG
ACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCCCGCGAGCAAGCCCTTAG
TGCCGTATCTCACGCCTGGATGGACGGCCACCCACTGCGCGTGTACCGCC
AGGCACCCAACACCGGTCCGCGCAAGGGCTGGGCAGCGGGTGATGCTTGC
ATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGACAACCAGGTGC
CAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACGATGTACTGTTCA
AGGGCCAGGAATTCGATCTCCCCCAGCCATTTGGCACCTGGGTCATTGAA
ACGGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAATGACGGCAGT
GGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACC
CAGCCAAGGATATCCAGTCAATCCACGCCAAGACCCAGGCTGCTGGTATG
ACGATCATCAACAAGGGCGGCGCAACTTTGCATAACGCCGCAGATCGTGA
CCACTGCCTGCGGTACATGGTCGCTGTGGTGCTGCTGAAGGGAGCGCAGG
TCGAGACGGCCGACTACCAGGACGACAGTCCCTGGGCGACGGACCCGCGC
GTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAAGACCCCAAATACAC
AGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTG
TCACCCTGACGGACGGCACGACGCTGCCTGAAGTGTTGGTAGAATATCCA
CTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAGGTTTACGCAAAATC
AGAGCGGAATCTGGGTCTTCGACTGTCGACAGATAGAGTCCAGCAGATCC
TGAAGACGGTGGCATCGGAGGAGTTTATGTCGCTACCAGCATGCCATTTT
GTGAACCTTTTCAGTTTGTAAATGACTGTCATTCCTGCCGCCGACGACAA
CTCGCGCAAGCCCTACGATGCTGTGATCCAGGCCATCGTCGACTATGTTT
ACGACTACCAGATCGCCACCGATAATGCCTGGGCGCGGGCCAAGGTCGCC
TTGATGGATGCTCTTGGAGCTGCCCTCGAGAGTATCCATACCAGTCCCCA
ATGTGCACAGCTCGTTGGACCGGCGTTCCCCATCGCCCCAGCCACCTCGG
GTTTGTTCCGGTTACCGGGAACAGCCTACCAGCTGGATATTCTCAAGGGA
GCCTTTGATCTGGGGGCCATGATCCGCTACCTCGACCACAATGATGCCTT
TCCCGGTGCAGAATGGGGGCATCCCTCGGATAACCTTGGTGCCATCCTGG
CCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGAC
AGCATCGTGACAATGCAGCAGGTTCTGGAGGCCCTGATCAAGGCGTATGA
GATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTGG
ACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTG
CTAGATCTTCCCCGCGAGCAAGCCCTTAGTGCCGTATCTCACGCCTGGAT
GGACGGCCACCCACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGC
GCAAGGGCTGGGCAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCA
CTACTAGCCAAGGCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCC
CCGCTGGGGTTTCTACGATGTACTGTTCAAGGGCCAGGAATTCGATCTCC
CCCAGCCATTTGGCACCTGGGTCATTGAAACGGTGCTGTTTAAGGTGAAC
ACGGCCGAGGGCCATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGC
CAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAA
TCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGC
GCAACTTTGCATAACGCCGCAGATCGTGACCACTGCCTGCGGTACATGGT
CGCTGTGGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGG
ACGACAGTCCCTGGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAG
ATCACCATGGCAGAAGACCCCAAATACACAGCCGATTATCATGATATGGC
GGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGA
CGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCG
GAGACGCCGCAGGAGGTTTACGCAAAATCAGAGCGGAATCTGGGTCTTCG
ACTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGG
AGTTTATGTCGCTACCAGCATGCCATTTTGTGAACCTTTTCAGTTTGTAA
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTTTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGTGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATTCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019679propionate metabolic process, methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00475472-methylcitrate dehydratase activity
GO:00515372 iron, 2 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010971ATCC10864_010971Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010971-T1ATCC10864_010971-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010971-T1.cdsATCC10864_010971-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010971-T1.exon2ATCC10864_010971-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010971-T1.exon1ATCC10864_010971-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03972
InterProIPR042188
InterProIPR005656
InterProIPR036148
InterProIPR012705
PFAMPF19305
InterProIPR042183
Properties
Property NameValue
NoteantiSMASH:Cluster_1000246.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:695195..696732 -
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