You are here

ATCC10864_011076-T1, ATCC10864_011076-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011076-T1
Unique NameATCC10864_011076-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000253:156974..159016+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011076-T1 ID=ATCC10864_011076-T1|Name=ATCC10864_011076-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2043bp|location=Sequence derived from alignment at MCQH01000253:156974..159016+ (Aspergillus niger ATCC 10864)
ATGCTAGGCGAACTACCTGGTGAGGTCCTGCAGTGCGTCGCAGACTGCCT AAATACCGCAAAAGATCGGAACAACCTCGCAAAAACAAGCCGGCGGCTCT ATCGCTGCACCAACCCCTTGCTTTATCAGTGGGATATGTATTATCGTATG GGTTACGCAATAAAATGGGCTGCGGAGAATGAACGAGAGACAACAGCCCG ATTGTCACTAGCGATAGCTCACACGCCAGAATCATTGGATGTTGCGGGAT TCGCTCTATTGCTAGCAACTAAGCTGAGACATGAGGCTGTGATCAGAATC ATACTATCTACGAAGGGAGTCAACCTTAACTTTAGTGTGCATGGGAGGAC CCCGCTTTGGCACGCAGCGGCAAACGGATATGAAGGGATTGTGAAAATGC TACTCAACATGAAGGATGTCAATCCCGACGAGCAGGACCATTGGGGTGGA ACACCATTATGCATTGCAGCACAATACGGGCATCTAGAGGTAGTCAAGTT GTTGCTTGCCACCAAGCGGGTGAATCCAGGTCATCGAGACAGCTGGGGAG ACACCCCGGCCATCAGAGCAGCAGCAGGAAGGTATGAGAAAATAGTGATG TTACTACTCAATACTGAAGTTGTCGATCCTCATTCCCAGAATAGTCATGG CTGGACCATCCTGTCATGGGCGATAATACGTGGTCTGCAACAGGTAGTCG AATTCCTGCTTGCTACCCCGGGAATTGACCCAGATCTTAGAGACTCTGAC GGATTTACTCCATTGTCCAGAGCAGCAGGGGCTGGAAGAAAGCAAGTAGT CTCACTACTGCTCGGCACGGGAAAGGTGAACCCCAATTCTCTAGCCAATT GCCGAGAGACACCGCTGTCCATCTCCGCAAACTATGGCTATGCGGCAATC GTCAAGTTGCTTATTACCGCAGGTGCAAACATCCATACTCGAGACGACAT GGGAGCCACGGCACTCATGTATGGCGCGAAAACCGGAAATCTGGAACTCG TCGAAGCGCTTCTTGCTGCAGGTGCAGACATTCACGCCCGAAATAATGAC GGTGCGACTGCCCTCATATATGCTGCGGAATACGGAAAGCTCAAAATTGT TGAAACACTTCTGGCTGTAGGCGCAGATGTTCACATTGCAGATAACGATG GAACGACAGCACTCATACACGCTGTTGGATCCGGAAATGTGAAAGTGGTT GAAGCGCTTGTTGCTGCAGGCGCAGAAATCAATATGGGAGATAACTGGAG ACAAACACCACTTTTTTACTCTGTACTGCATAGAAGCTGGGAGGTTCTTA GCTTCCTTATTGCTAAAGGTGCAGAGATTGACATCCAAACTACTGATGGG GAGACAGCACTCACTCAGGCTTCGAGTTATGGATATGATGTGAAAATAGT TAAAGCGCTTATTGCTGCAGGAGCAGGACTGGACATCAGAGTCAACAGCA GTGATGAATATGGAGGCACACCCCTTCTGAATGCGGTTAATTGTAAGGCA GAAGTAGTGGTTGAAGCTCTGCTTTCTGCAGGCGCCATGCCTGATATCGG GAATAGCCGAGGACAGACCCCCCTTGCGAGGGCAGCCGTGGAGGGACATC CGAAGATATTTAGGCTTCTATTAGAAGCAGGAGCAAATCCACACATTGCT GATCGTGAAGGATGGACTCCGTTGGCATACCTATCACGATTTCGTCAGGA CAATGTCCAACTTTTCAAATTACTTCTTGCTGCGGGTGTGAATGTTAATG TCAAAACCGAGGATGGATGGACGCCATTGGCGCTAGCAGCTAATTGCGGT AGTCTAGAGGCGGTAAAGATTTTACTTGCAGCGGGGGCAGACCCAAACTC TGGAACACCCCTAACAAAAGCAGCGTTTCACGAGCACCTGGAGATTGTGA AAACACTTCTTGCCGCAGAAGGCATCGATACGGATTTGAAGGGTAGTGAC TGGCTGCCAGCGCTGTGGATAGACAGACAGCCGGGCTATTCGAGAGCGGC GGACTTGATACATCAGCACAGAATGCTTAAAATTATGGTTTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000253:156974..159016+

>ATCC10864_011076-T1 ID=ATCC10864_011076-T1|Name=ATCC10864_011076-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2043bp|location=Sequence derived from alignment at MCQH01000253:156974..159016+ (Aspergillus niger ATCC 10864)
ATGCTAGGCGAACTACCTGGTGAGGTCCTGCAGTGCGTCGCAGACTGCCT
AAATACCGCAAAAGATCGGAACAACCTCGCAAAAACAAGCCGGCGGCTCT
ATCGCTGCACCAACCCCTTGCTTTATCAGTGGGATATGTATTATCGTATG
GGTTACGCAATAAAATGGGCTGCGGAGAATGAACGAGAGACAACAGCCCG
ATTGTCACTAGCGATAGCTCACACGCCAGAATCATTGGATGTTGCGGGAT
TCGCTCTATTGCTAGCAACTAAGCTGAGACATGAGGCTGTGATCAGAATC
ATACTATCTACGAAGGGAGTCAACCTTAACTTTAGTGTGCATGGGAGGAC
CCCGCTTTGGCACGCAGCGGCAAACGGATATGAAGGGATTGTGAAAATGC
TACTCAACATGAAGGATGTCAATCCCGACGAGCAGGACCATTGGGGTGGA
ACACCATTATGCATTGCAGCACAATACGGGCATCTAGAGGTAGTCAAGTT
GTTGCTTGCCACCAAGCGGGTGAATCCAGGTCATCGAGACAGCTGGGGAG
ACACCCCGGCCATCAGAGCAGCAGCAGGAAGGTATGAGAAAATAGTGATG
TTACTACTCAATACTGAAGTTGTCGATCCTCATTCCCAGAATAGTCATGG
CTGGACCATCCTGTCATGGGCGATAATACGTGGTCTGCAACAGGTAGTCG
AATTCCTGCTTGCTACCCCGGGAATTGACCCAGATCTTAGAGACTCTGAC
GGATTTACTCCATTGTCCAGAGCAGCAGGGGCTGGAAGAAAGCAAGTAGT
CTCACTACTGCTCGGCACGGGAAAGGTGAACCCCAATTCTCTAGCCAATT
GCCGAGAGACACCGCTGTCCATCTCCGCAAACTATGGCTATGCGGCAATC
GTCAAGTTGCTTATTACCGCAGGTGCAAACATCCATACTCGAGACGACAT
GGGAGCCACGGCACTCATGTATGGCGCGAAAACCGGAAATCTGGAACTCG
TCGAAGCGCTTCTTGCTGCAGGTGCAGACATTCACGCCCGAAATAATGAC
GGTGCGACTGCCCTCATATATGCTGCGGAATACGGAAAGCTCAAAATTGT
TGAAACACTTCTGGCTGTAGGCGCAGATGTTCACATTGCAGATAACGATG
GAACGACAGCACTCATACACGCTGTTGGATCCGGAAATGTGAAAGTGGTT
GAAGCGCTTGTTGCTGCAGGCGCAGAAATCAATATGGGAGATAACTGGAG
ACAAACACCACTTTTTTACTCTGTACTGCATAGAAGCTGGGAGGTTCTTA
GCTTCCTTATTGCTAAAGGTGCAGAGATTGACATCCAAACTACTGATGGG
GAGACAGCACTCACTCAGGCTTCGAGTTATGGATATGATGTGAAAATAGT
TAAAGCGCTTATTGCTGCAGGAGCAGGACTGGACATCAGAGTCAACAGCA
GTGATGAATATGGAGGCACACCCCTTCTGAATGCGGTTAATTGTAAGGCA
GAAGTAGTGGTTGAAGCTCTGCTTTCTGCAGGCGCCATGCCTGATATCGG
GAATAGCCGAGGACAGACCCCCCTTGCGAGGGCAGCCGTGGAGGGACATC
CGAAGATATTTAGGCTTCTATTAGAAGCAGGAGCAAATCCACACATTGCT
GATCGTGAAGGATGGACTCCGTTGGCATACCTATCACGATTTCGTCAGGA
CAATGTCCAACTTTTCAAATTACTTCTTGCTGCGGGTGTGAATGTTAATG
TCAAAACCGAGGATGGATGGACGCCATTGGCGCTAGCAGCTAATTGCGGT
AGTCTAGAGGCGGTAAAGATTTTACTTGCAGCGGGGGCAGACCCAAACTC
TGGAACACCCCTAACAAAAGCAGCGTTTCACGAGCACCTGGAGATTGTGA
AAACACTTCTTGCCGCAGAAGGCATCGATACGGATTTGAAGGGTAGTGAC
TGGCTGCCAGCGCTGTGGATAGACAGACAGCCGGGCTATTCGAGAGCGGC
GGACTTGATACATCAGCACAGAATGCTTAAAATTATGGTTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011076ATCC10864_011076Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011076-T1.exon1ATCC10864_011076-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011076-T1.cdsATCC10864_011076-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011076-T1ATCC10864_011076-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
PFAMPF13637
PFAMPF13606
PFAMPF00023
InterProIPR020683
InterProIPR036770
PFAMPF13857
InterProIPR002110
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000253supercontigMCQH01000253:156974..159016 +