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ATCC10864_011111-T1, ATCC10864_011111-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011111-T1
Unique NameATCC10864_011111-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000255:91692..92830+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011111-T1 ID=ATCC10864_011111-T1|Name=ATCC10864_011111-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1139bp|location=Sequence derived from alignment at MCQH01000255:91692..92830+ (Aspergillus niger ATCC 10864)
ATGCGGCCACAGTAAGCTCCGCCTCGGACTCTCTATTCCGCAACAATCGA
TCGGAGGTTGTCGCAGTCGCTAATACACTGGGTTCTTAATAGGCGGGAAT
ACCATATCGTTGTTTTAGGTGCTGGTGGGTACACACATCTGTGACAGACA
ATAAGAAATGTTTCACCGCTGACCATCGGTCGTTGTCGGCGCAATAGGAG
GTGTGGGAAAGAGCTGTCTTACTGGTATGCTCCTGGTCGCATATATCTAC
CTGGTTCTTTGCCATGATTTGCTGATGCTGAGTAGCTCAATTCGTGCAAA
ATGTCTGGATCGAGAGCTATGACCCTACAATCGAGGATTCATACCGGAAG
CAGATCGACGTGGATGTAAGTTCGGCTTCGACCTTGTCTGGATATAGTCA
CTTACACTCCTAGGGCCGGCAATGTATTCTGGAAATGTATGTGTTGTGCG
CAGCGAATCTGTTCCACAGCGCAGTTGCATCACTACGGTGAACCGAGATA
GCTGACTGTTGTATCCAGACTGGACACTGCAGGAACAGAACAGTTTAGTA
AGTCTTCGTGGACACGGTAGCATCCAAGTTCTCTGGTACTAACATTTTCT
TAGCGGCCATGAGGTAAATGCGCCCACTCAGGACTCCCTCCTCCCGCCAA
GTTATACGGCGTATTTACAACCGTTGCCATTTCGGGCCCCATGCTGACGT
TGGATTGCATTCCAGAGAGTTGTACATGAAACAAGGCCAAGGGTTTCTGC
TCGTATTCTCAATTACGAGCATGTCCTCGCTGAACGAGTTGTCCGAGCTA
CGCGAACAAATAATCCGCATCAAGGAGGATGAGAAAGTTCCCATTGTCAT
CGTGGGCAACAAGTCCGACCTGGAAGAGGACCGCGCTGTGCCACGCGCGC
GCGCATTCGCCCTCTCCCAAACCTGGGGAAACGCCCCCTACTACGAAACC
TCGGCCCGTCGACGAGCTAACGTCAACGAAGTCTTCATTGACCTCTGCCG
ACAGATCATCCGAAAGGACCTGCAAGGAAATTCCAAGAACTCCGACTCAG
ATCGCAAACGGGAAGGTGGCAATCGGCAGGACCGTCGAAAGGACAAAAAG
CGCCAGACCCGGCGCAAGGGACCCTGCGTGATCCTATAA
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Coding sequence (CDS) from alignment at MCQH01000255:91692..92830+

>ATCC10864_011111-T1 ID=ATCC10864_011111-T1|Name=ATCC10864_011111-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4410bp|location=Sequence derived from alignment at MCQH01000255:91692..92830+ (Aspergillus niger ATCC 10864)
ATGCGGCCACAGCGGGAATACCATATCGTTGTTTTAGGTGCTGGAGGTGT
GGGAAAGAGCTGTCTTACTGCTCAATTCGTGCAAAATGTCTGGATCGAGA
GCTATGACCCTACAATCGAGGATTCATACCGGAAGCAGATCGACGTGGAT
GGCCGGCAATGTATTCTGGAAATACTGGACACTGCAGGAACAGAACAGTT
TAGTAAAGAGTTGTACATGAAACAAGGCCAAGGGTTTCTGCTCGTATTCT
CAATTACGAGCATGTCCTCGCTGAACGAGTTGTCCGAGCTACGCGAACAA
ATAATCCGCATCAAGGAGGATGAGAAAGTTCCCATTGTCATCGTGGGCAA
CAAGTCCGACCTGGAAGAGGACCGCGCTGTGCCACGCGCGCGCGCATTCG
CCCTCTCCCAAACCTGGGGAAACGCCCCCTACTACGAAACCTCGGCCCGT
CGACGAGCTAACGTCAACGAAGTCTTCATTGACCTCTGCCGACAGATCAT
CCGAAAGGACCTGCAAGGAAATTCCAAGAACTCCGACTCAGATCGCAAAC
GGGAAGGTGGCAATCGGCAGGACCGTCGAAAGGACAAAAAGCGCCAGACC
CGGCGCAAGGGACCCTGCGTGATCCTATAAATGCGGCCACAGCGGGAATA
CCATATCGTTGTTTTAGGTGCTGGAGGTGTGGGAAAGAGCTGTCTTACTG
CTCAATTCGTGCAAAATGTCTGGATCGAGAGCTATGACCCTACAATCGAG
GATTCATACCGGAAGCAGATCGACGTGGATGGCCGGCAATGTATTCTGGA
AATACTGGACACTGCAGGAACAGAACAGTTTAGTAAAGAGTTGTACATGA
AACAAGGCCAAGGGTTTCTGCTCGTATTCTCAATTACGAGCATGTCCTCG
CTGAACGAGTTGTCCGAGCTACGCGAACAAATAATCCGCATCAAGGAGGA
TGAGAAAGTTCCCATTGTCATCGTGGGCAACAAGTCCGACCTGGAAGAGG
ACCGCGCTGTGCCACGCGCGCGCGCATTCGCCCTCTCCCAAACCTGGGGA
AACGCCCCCTACTACGAAACCTCGGCCCGTCGACGAGCTAACGTCAACGA
AGTCTTCATTGACCTCTGCCGACAGATCATCCGAAAGGACCTGCAAGGAA
ATTCCAAGAACTCCGACTCAGATCGCAAACGGGAAGGTGGCAATCGGCAG
GACCGTCGAAAGGACAAAAAGCGCCAGACCCGGCGCAAGGGACCCTGCGT
GATCCTATAAATGCGGCCACAGCGGGAATACCATATCGTTGTTTTAGGTG
CTGGAGGTGTGGGAAAGAGCTGTCTTACTGCTCAATTCGTGCAAAATGTC
TGGATCGAGAGCTATGACCCTACAATCGAGGATTCATACCGGAAGCAGAT
CGACGTGGATGGCCGGCAATGTATTCTGGAAATACTGGACACTGCAGGAA
CAGAACAGTTTAGTAAAGAGTTGTACATGAAACAAGGCCAAGGGTTTCTG
CTCGTATTCTCAATTACGAGCATGTCCTCGCTGAACGAGTTGTCCGAGCT
ACGCGAACAAATAATCCGCATCAAGGAGGATGAGAAAGTTCCCATTGTCA
TCGTGGGCAACAAGTCCGACCTGGAAGAGGACCGCGCTGTGCCACGCGCG
CGCGCATTCGCCCTCTCCCAAACCTGGGGAAACGCCCCCTACTACGAAAC
CTCGGCCCGTCGACGAGCTAACGTCAACGAAGTCTTCATTGACCTCTGCC
GACAGATCATCCGAAAGGACCTGCAAGGAAATTCCAAGAACTCCGACTCA
GATCGCAAACGGGAAGGTGGCAATCGGCAGGACCGTCGAAAGGACAAAAA
GCGCCAGACCCGGCGCAAGGGACCCTGCGTGATCCTATAAATGCGGCCAC
AGCGGGAATACCATATCGTTGTTTTAGGTGCTGGAGGTGTGGGAAAGAGC
TGTCTTACTGCTCAATTCGTGCAAAATGTCTGGATCGAGAGCTATGACCC
TACAATCGAGGATTCATACCGGAAGCAGATCGACGTGGATGGCCGGCAAT
GTATTCTGGAAATACTGGACACTGCAGGAACAGAACAGTTTAGTAAAGAG
TTGTACATGAAACAAGGCCAAGGGTTTCTGCTCGTATTCTCAATTACGAG
CATGTCCTCGCTGAACGAGTTGTCCGAGCTACGCGAACAAATAATCCGCA
TCAAGGAGGATGAGAAAGTTCCCATTGTCATCGTGGGCAACAAGTCCGAC
CTGGAAGAGGACCGCGCTGTGCCACGCGCGCGCGCATTCGCCCTCTCCCA
AACCTGGGGAAACGCCCCCTACTACGAAACCTCGGCCCGTCGACGAGCTA
ACGTCAACGAAGTCTTCATTGACCTCTGCCGACAGATCATCCGAAAGGAC
CTGCAAGGAAATTCCAAGAACTCCGACTCAGATCGCAAACGGGAAGGTGG
CAATCGGCAGGACCGTCGAAAGGACAAAAAGCGCCAGACCCGGCGCAAGG
GACCCTGCGTGATCCTATAAATGCGGCCACAGCGGGAATACCATATCGTT
GTTTTAGGTGCTGGAGGTGTGGGAAAGAGCTGTCTTACTGCTCAATTCGT
GCAAAATGTCTGGATCGAGAGCTATGACCCTACAATCGAGGATTCATACC
GGAAGCAGATCGACGTGGATGGCCGGCAATGTATTCTGGAAATACTGGAC
ACTGCAGGAACAGAACAGTTTAGTAAAGAGTTGTACATGAAACAAGGCCA
AGGGTTTCTGCTCGTATTCTCAATTACGAGCATGTCCTCGCTGAACGAGT
TGTCCGAGCTACGCGAACAAATAATCCGCATCAAGGAGGATGAGAAAGTT
CCCATTGTCATCGTGGGCAACAAGTCCGACCTGGAAGAGGACCGCGCTGT
GCCACGCGCGCGCGCATTCGCCCTCTCCCAAACCTGGGGAAACGCCCCCT
ACTACGAAACCTCGGCCCGTCGACGAGCTAACGTCAACGAAGTCTTCATT
GACCTCTGCCGACAGATCATCCGAAAGGACCTGCAAGGAAATTCCAAGAA
CTCCGACTCAGATCGCAAACGGGAAGGTGGCAATCGGCAGGACCGTCGAA
AGGACAAAAAGCGCCAGACCCGGCGCAAGGGACCCTGCGTGATCCTATAA
ATGCGGCCACAGCGGGAATACCATATCGTTGTTTTAGGTGCTGGAGGTGT
GGGAAAGAGCTGTCTTACTGCTCAATTCGTGCAAAATGTCTGGATCGAGA
GCTATGACCCTACAATCGAGGATTCATACCGGAAGCAGATCGACGTGGAT
GGCCGGCAATGTATTCTGGAAATACTGGACACTGCAGGAACAGAACAGTT
TAGTAAAGAGTTGTACATGAAACAAGGCCAAGGGTTTCTGCTCGTATTCT
CAATTACGAGCATGTCCTCGCTGAACGAGTTGTCCGAGCTACGCGAACAA
ATAATCCGCATCAAGGAGGATGAGAAAGTTCCCATTGTCATCGTGGGCAA
CAAGTCCGACCTGGAAGAGGACCGCGCTGTGCCACGCGCGCGCGCATTCG
CCCTCTCCCAAACCTGGGGAAACGCCCCCTACTACGAAACCTCGGCCCGT
CGACGAGCTAACGTCAACGAAGTCTTCATTGACCTCTGCCGACAGATCAT
CCGAAAGGACCTGCAAGGAAATTCCAAGAACTCCGACTCAGATCGCAAAC
GGGAAGGTGGCAATCGGCAGGACCGTCGAAAGGACAAAAAGCGCCAGACC
CGGCGCAAGGGACCCTGCGTGATCCTATAAATGCGGCCACAGCGGGAATA
CCATATCGTTGTTTTAGGTGCTGGAGGTGTGGGAAAGAGCTGTCTTACTG
CTCAATTCGTGCAAAATGTCTGGATCGAGAGCTATGACCCTACAATCGAG
GATTCATACCGGAAGCAGATCGACGTGGATGGCCGGCAATGTATTCTGGA
AATACTGGACACTGCAGGAACAGAACAGTTTAGTAAAGAGTTGTACATGA
AACAAGGCCAAGGGTTTCTGCTCGTATTCTCAATTACGAGCATGTCCTCG
CTGAACGAGTTGTCCGAGCTACGCGAACAAATAATCCGCATCAAGGAGGA
TGAGAAAGTTCCCATTGTCATCGTGGGCAACAAGTCCGACCTGGAAGAGG
ACCGCGCTGTGCCACGCGCGCGCGCATTCGCCCTCTCCCAAACCTGGGGA
AACGCCCCCTACTACGAAACCTCGGCCCGTCGACGAGCTAACGTCAACGA
AGTCTTCATTGACCTCTGCCGACAGATCATCCGAAAGGACCTGCAAGGAA
ATTCCAAGAACTCCGACTCAGATCGCAAACGGGAAGGTGGCAATCGGCAG
GACCGTCGAAAGGACAAAAAGCGCCAGACCCGGCGCAAGGGACCCTGCGT
GATCCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAP1BATCC10864_011111Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011111-T1ATCC10864_011111-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011111-T1.exon1ATCC10864_011111-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011111-T1.exon2ATCC10864_011111-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011111-T1.exon3ATCC10864_011111-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011111-T1.exon4ATCC10864_011111-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011111-T1.exon5ATCC10864_011111-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_011111-T1.exon6ATCC10864_011111-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_011111-T1.exon7ATCC10864_011111-T1.exon7Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011111-T1.cdsATCC10864_011111-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027417
PFAMPF00025
PFAMPF00071
InterProIPR001806
PFAMPF08477
InterProIPR005225
InterProIPR020849
Properties
Property NameValue
ProductRas- protein Rap-1b
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000255supercontigMCQH01000255:91692..92830 +
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