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ATCC10864_011230-T1, ATCC10864_011230-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011230-T1
Unique NameATCC10864_011230-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000265:1979..3763+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011230-T1 ID=ATCC10864_011230-T1|Name=ATCC10864_011230-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1785bp|location=Sequence derived from alignment at MCQH01000265:1979..3763+ (Aspergillus niger ATCC 10864)
ATGCTGAAGCCCCAACAAACACCTTTTAGAGATATAGTCTCCCTCGACGG
GATTTGGAAGTTTGCTCTCGGTTCCAGCGATAATGAGACGGCGACACCCT
GGACAGCTCCATTAGCCACCGATCTGGAGTGTCCCGTTCCAGCCTCTTAT
AACGACATCTTTGTCGATCGTCAGATCCATGACCATGTCGGATGGGTTTA
CTACCAGCGCCAAGCTATTGTCCCCAGAGGCTGGTCACAGCAGCAATATC
TCGTGCGGGTTGATGCCGCCACACACAAAGGTCGTATCTATATAAACGAC
CATCTAGTCGCCGAGCATGTGGGCGGCTACACACCTTTTGAAGCAGATAT
CACGAGTCTTGTCTCTGCTGGTGACAGGTTCCGACTGACTATCGCTGTCA
ATAACGTGCTGACTCACGAGACTATTCCGCCAGGCAGGATAGAAGTATTG
GAATACACAGGTAAAAAGACGCAAGTCTACCAGCATGATTTCTTCAATTA
CGCGGGACTTGCGCGCTCCGTCTCGCTGTATTCTGTTCCGAAGCAGCACA
TCCAGGATATCAAAGTCGTCACGGACGTGAACGGCGCAACCGGGCAGATA
AAATACCTCGTCACGGTGACCAACGCGACTACAGAGCGCATCAAGATCGA
CGTGGTCGATGAGGACGGCAGAACTGTGGCCGAAGCTTCAGGTACTCATG
GTAATGTTACAATAGACTCTGTCAGGCTGTGGCAGCCGGGAGATGCATAT
CTGTATCAATTTCGGGTGAGCATCGTGGGCTTGGACGACAGTATACTTGA
CACTTATAGTGTTGCGACGGGCGTACGTACAGTCAAAGTCAGCGGTAACA
AATTCCTCATCAACGACAAGCCGTTCTACTTCACCGGCTTTGGGAAGCAC
GAGGACAGCAATGTGCGCGGCAAAGGCTATGACGCAGCGTACATGGTGCA
CGATTTCCAGTTGATGAATTGGATGGGAGCCAACTCATTCCGCACCTCGC
ATTATCCGTACGCCGAAGAGGTCATGGAATTTGCGGACCGGCACGGAATC
GTTGTCATTGACGAGACGCCCGCCGTTGGCCTGGCGTACTCCATTGGGGC
TGGAGTTTCTAGCGAAGACAGCCCACAGACATTTACCCCGGAAGGGATCA
ACAATAACACCCGCGAAGCTCACAAGCAAGCAATCCGGGAGCTCATTGCT
CGGGATAAGAACCACGCCAGTGTTGTCATGTGGTCGATTGCAAATGAGCC
TGCATCACAAGAAGCAGGAGCCCGTGAGTATTTCACGCCACTCGTTGACC
TGGCCCACGAGCTTGACTCAGATCGCCCCATCTGTTTTGCAAATTACGGA
GACGCCACATATGAGGTGGATCGAATCTCGGATATGTTTGACGTCCTCTG
CCTCAACCGCTATTTCGGGTGGTATTCGCAAACCGGTGAGATTGAGGAGG
CGGAAGCGGCTCTCGAAACAGAGCTATTGGGCTGGGAGGGCAAATACGAC
AAACCCATCGTCATGACAGAATACGGGGCGGATACCTTGGCTGGCCTCCA
TTCGGTGCTTGGGCTTCCGTGGAGCGAGGAGTTCCAGGTCGAACTGCTCG
ACATGTACCATCGAGTGTTTGACCGTGTCGAATCAGTGGTGGGAGAGCAC
GTTTGGAACTTTGCGGACTTTCAGGCGGTCGTAGGGGTCGGCAGGGTGGA
CGGGAACAAGAAGGGGGTCTTTACCAGGGATAGGAAACCAAAGGCTGCAG
TTCAGACTCTGAGAAGTCGATGGAGTCAATTGTAG
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Coding sequence (CDS) from alignment at MCQH01000265:1979..3763+

>ATCC10864_011230-T1 ID=ATCC10864_011230-T1|Name=ATCC10864_011230-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1785bp|location=Sequence derived from alignment at MCQH01000265:1979..3763+ (Aspergillus niger ATCC 10864)
ATGCTGAAGCCCCAACAAACACCTTTTAGAGATATAGTCTCCCTCGACGG
GATTTGGAAGTTTGCTCTCGGTTCCAGCGATAATGAGACGGCGACACCCT
GGACAGCTCCATTAGCCACCGATCTGGAGTGTCCCGTTCCAGCCTCTTAT
AACGACATCTTTGTCGATCGTCAGATCCATGACCATGTCGGATGGGTTTA
CTACCAGCGCCAAGCTATTGTCCCCAGAGGCTGGTCACAGCAGCAATATC
TCGTGCGGGTTGATGCCGCCACACACAAAGGTCGTATCTATATAAACGAC
CATCTAGTCGCCGAGCATGTGGGCGGCTACACACCTTTTGAAGCAGATAT
CACGAGTCTTGTCTCTGCTGGTGACAGGTTCCGACTGACTATCGCTGTCA
ATAACGTGCTGACTCACGAGACTATTCCGCCAGGCAGGATAGAAGTATTG
GAATACACAGGTAAAAAGACGCAAGTCTACCAGCATGATTTCTTCAATTA
CGCGGGACTTGCGCGCTCCGTCTCGCTGTATTCTGTTCCGAAGCAGCACA
TCCAGGATATCAAAGTCGTCACGGACGTGAACGGCGCAACCGGGCAGATA
AAATACCTCGTCACGGTGACCAACGCGACTACAGAGCGCATCAAGATCGA
CGTGGTCGATGAGGACGGCAGAACTGTGGCCGAAGCTTCAGGTACTCATG
GTAATGTTACAATAGACTCTGTCAGGCTGTGGCAGCCGGGAGATGCATAT
CTGTATCAATTTCGGGTGAGCATCGTGGGCTTGGACGACAGTATACTTGA
CACTTATAGTGTTGCGACGGGCGTACGTACAGTCAAAGTCAGCGGTAACA
AATTCCTCATCAACGACAAGCCGTTCTACTTCACCGGCTTTGGGAAGCAC
GAGGACAGCAATGTGCGCGGCAAAGGCTATGACGCAGCGTACATGGTGCA
CGATTTCCAGTTGATGAATTGGATGGGAGCCAACTCATTCCGCACCTCGC
ATTATCCGTACGCCGAAGAGGTCATGGAATTTGCGGACCGGCACGGAATC
GTTGTCATTGACGAGACGCCCGCCGTTGGCCTGGCGTACTCCATTGGGGC
TGGAGTTTCTAGCGAAGACAGCCCACAGACATTTACCCCGGAAGGGATCA
ACAATAACACCCGCGAAGCTCACAAGCAAGCAATCCGGGAGCTCATTGCT
CGGGATAAGAACCACGCCAGTGTTGTCATGTGGTCGATTGCAAATGAGCC
TGCATCACAAGAAGCAGGAGCCCGTGAGTATTTCACGCCACTCGTTGACC
TGGCCCACGAGCTTGACTCAGATCGCCCCATCTGTTTTGCAAATTACGGA
GACGCCACATATGAGGTGGATCGAATCTCGGATATGTTTGACGTCCTCTG
CCTCAACCGCTATTTCGGGTGGTATTCGCAAACCGGTGAGATTGAGGAGG
CGGAAGCGGCTCTCGAAACAGAGCTATTGGGCTGGGAGGGCAAATACGAC
AAACCCATCGTCATGACAGAATACGGGGCGGATACCTTGGCTGGCCTCCA
TTCGGTGCTTGGGCTTCCGTGGAGCGAGGAGTTCCAGGTCGAACTGCTCG
ACATGTACCATCGAGTGTTTGACCGTGTCGAATCAGTGGTGGGAGAGCAC
GTTTGGAACTTTGCGGACTTTCAGGCGGTCGTAGGGGTCGGCAGGGTGGA
CGGGAACAAGAAGGGGGTCTTTACCAGGGATAGGAAACCAAAGGCTGCAG
TTCAGACTCTGAGAAGTCGATGGAGTCAATTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011230ATCC10864_011230Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011230-T1.exon1ATCC10864_011230-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011230-T1.cdsATCC10864_011230-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011230-T1ATCC10864_011230-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036156
InterProIPR008979
PFAMPF02837
PFAMPF02836
InterProIPR006103
InterProIPR006104
InterProIPR023230
PFAMPF00703
InterProIPR017853
InterProIPR013783
InterProIPR023232
InterProIPR006101
InterProIPR006102
Properties
Property NameValue
NoteCAZy:GH2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000265supercontigMCQH01000265:1979..3763 +
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